SE33

Other Names Chromosomal Location GenBank Accession

 ACTBP2

UniSTS: none reported

6q14; β-actin related pseudogene

chr 6; 89.043 Mb (May 2004, NCBI Build 35)

V00481; has 26.2 repeats

Repeat: [AAAG] = top strand  

Reported Primers Ref. PCR Primer Sequences
Set 1 150; 162; Promega; ABI

5'-AATCTGGGCGACAAGAGTGA-3' 

5'-ACATCTCCCCTACCGCTATA-3'
Set 2    

PCR Product Sizes of Observed Alleles   (* = present in PowerPlex ES allelic ladder; ^ = present in SEfiler allelic ladder; note that when degenerate alleles exist, only the first one is labeled)

Allele (Repeat #) Set 1 Set 2 Repeat Structure Ref.
3 197 bp     variant allele
4.2*^ 203 bp      
6.3*^ 212 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]7 - [AAAG]3 AG 2510
7 213 bp     1582
8*^ 217 bp      
8.1 218 bp     1582
9*^ 221 bp      
9.2 223 bp     1582
10* 225 bp      
11*^ 229 bp      
11.2 231 bp     1582
12*^ 233 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]12 G [AAAG]3 AG 2510
12.2 235 bp   [AAAG]2 AG [AAAG]3 -- [AAAG]13 G [AAAG]3 AG 2510
13*^ 237 bp      
13.2 239 bp   [AAAG]2 AG [AAAG]3 -- [AAAG]14 G [AAAG]3 AG 2510
14*^ 241 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]14 G [AAAG]3 AG 2510
14.2 243 bp     1582
14.3 244 bp      
15*^ 245 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]15 G [AAAG]3 AG 2510
15.2 247 bp     1582
16*^ 249 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]16 G [AAAG]3 AG 2510
16.2 251 bp     1582
16.3 252 bp     2411
17*^ 253 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]17 G [AAAG]3 AG 2510
17.2 255 bp     1582
17.3 256 bp     1582
18*^ 257 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]18 G [AAAG]3 AG 2510
18.2 259 bp     1582
18.3 260 bp     2411
19*^ 261 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]19 G [AAAG]3 AG 2510
19.2 263 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]10 AA AAAG [AAAG]8 G AAGG [AAAG]2 AG 2510
20*^ 265 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]20 G [AAAG]3 AG 2510
20.2*^ 267 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]11 AA AAAG [AAAG]8 G AAGG [AAAG]2 AG 2510
20.3 268 bp      
21*^ 269 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]21 G [AAAG]3 AG 2510
21.1^ 270 bp      
21.2*^ 271 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]9 AA AAAG [AAAG]11 G AAGG [AAAG]2 AG 2510
21.2 271 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]11 AA AAAG [AAAG]9 G AAGG [AAAG]2 AG 2510
22* 273 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]22 G [AAAG]3 AG 2510
22.2*^ 275 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]7 AA AAAG [AAAG]14 G AAGG [AAAG]2 AG 2510
22.2 275 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]8 [AG]5 [AAAG]12 G AAGG [AAAG]2 AG 2510
22.2 275 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]9 AA AAAG [AAAG]12 G AAGG [AAAG]2 AG 2510
22.2 275 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]10 AA AAAG [AAAG]11 G AAGG [AAAG]2 AG 2510
22.2 275 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]11 AA AAAG [AAAG]10 G AAGG [AAAG]2 AG 2510
22.2 275 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]12 AA AAAG [AAAG]9 G AAGG [AAAG]2 AG 2510
23 277 bp     1582
23.2*^ 279 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]7 AA AAAG [AAAG]15 G AAGG [AAAG]2 AG 2510
23.2 279 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]8 AA AAAG [AAAG]14 G AAGG [AAAG]2 AG 2510
23.2 279 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]9 AA AAAG [AAAG]13 G AAGG [AAAG]2 AG 2510
23.2 279 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]10 [AG]3 [AAAG]12 G AAGG [AAAG]2 AG 2510
23.2 279 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]10 AA AAAG [AAAG]12 G AAGG [AAAG]2 AG 2510
23.2 279 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]11 AA AAAG [AAAG]11 G AAGG [AAAG]2 AG 2510
23.2 279 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]12 AA AAAG [AAAG]10 G AAGG [AAAG]2 AG 2510
24 281 bp     1582
24.2*^ 283 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]5 AA AAAG [AAAG]18 G AAGG [AAAG]2 AG 2510
24.2 283 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]7 AA AAAG [AAAG]16 G AAGG [AAAG]2 AG 2510
24.2 283 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]8 AA AAAG [AAAG]15 G AAGG [AAAG]2 AG 2510
24.2 283 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]10 AA AAAG [AAAG]13 G AAGG [AAAG]2 AG 2510
24.2 283 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]11 AA AAAG [AAAG]12 G AAGG [AAAG]2 AG 2510
24.2 283 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]12 AA AAAG [AAAG]11 G AAGG [AAAG]2 AG 2510
25 285 bp     1582
25.2*^ 287 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]9 AA AAAG [AAAG]15 G AAGG [AAAG]2 AG 2510
25.2 287 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]10 AG AAAG [AAAG]14 G AAGG [AAAG]2 AG 2510
25.2 287 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]10 AA AAAG [AAAG]14 G AAGG [AAAG]2 AG 2510
25.2 287 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]11 AA AAAG [AAAG]13 G AAGG [AAAG]2 AG 2510
25.2 287 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]12 AA AAAG [AAAG]12 G AAGG [AAAG]2 AG 2510
25.2 287 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]14 AA AAAG [AAAG]10 G AAGG [AAAG]2 AG 2510
26 289 bp     1582
26.2*^ 291 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]8 AA AAAG [AAAG]17 G AAGG [AAAG]2 AG 2510
26.2 291 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]9 AA AAAG [AAAG]16 G AAGG [AAAG]2 AG 2510
26.2 291 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]10 AA AAAG [AAAG]15 G AAGG [AAAG]2 AG 2510
26.2 291 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]11 AG AAAG [AAAG]14 G AAGG [AAAG]2 AG 2510
26.2 291 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]11 AA AAAG [AAAG]14 G AAGG [AAAG]2 AG 2510
26.2 291 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]14 AA AAAG [AAAG]11 G AAGG [AAAG]2 AG 2510
27 293 bp     1582
27.2*^ 295 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]8 AG AAAG [AAAG]18 G AAGG [AAAG]2 AG 2510
27.2 295 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]8 AA AAAG [AAAG]18 G AAGG [AAAG]2 AG 2510
27.2 295 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]9 AG AAAG [AAAG]17 G [AAGG]3 AG 2510
27.2 295 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]10 AA AAAG [AAAG]16 G AAGG [AAAG]2 AG 2510
27.2 295 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]11 AA AAAG [AAAG]15 G AAGG [AAAG]2 AG 2510
27.2 295 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]12 AA AAAG [AAAG]14 G AAGG [AAAG]2 AG 2510
27.2 295 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]12 AA AAAG [AAAG]15 G AAGG [AAAG]2 AG 2510
27.2 295 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]13 AG AAAG [AAAG]13 G [AAGG]3 AG 2510
27.2 295 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]13 AA AAAG [AAAG]13 G AAGG [AAAG]2 AG 2510
27.2 295 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]15 AA AAAG [AAAG]11 G AAGG [AAAG]2 AG 2510
28 297 bp     1582
28.2*^ 299 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]8 AA AAAG [AAAG]19 G AAGG [AAAG]2 AG 2510
28.2 299 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]9 AG AAAG [AAAG]18 G AAGG [AAAG]2 AG 2510
28.2 299 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]9 [AG]9 [AAAG]15 G AAGG [AAAG]2 AG 2510
28.2 299 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]9 AA AAAG [AAAG]18 G AAGG [AAAG]2 AG 2510
28.2 299 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]10 AA AAAG [AAAG]17 G AAGG [AAAG]2 AG 2510
28.2 299 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]11 AA AAAG [AAAG]16 G AAGG [AAAG]2 AG 2510
28.2 299 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]12 AA AAAG [AAAG]15 G AAGG [AAAG]2 AG 2510
28.2 299 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]13 AA AAAG [AAAG]14 G AAGG [AAAG]2 AG 2510
28.2 299 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]14 AA AAAG [AAAG]13 G AAGG [AAAG]2 AG 2510
28.2 299 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]14 AA AAAG [AAAG]13 G [AAGG]3 AG 2510
28.2 299 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]16 AA AAAG [AAAG]11 G AAGG [AAAG]2 AG 2510
29 301 bp     1582
29.2*^ 303 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]8 AA AAAG [AAAG]20 G AAGG [AAAG]2 AG 2510
29.2 303 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]9 AG AAAG [AAAG]19 G AAGG [AAAG]2 AG 2510
29.2 303 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]9 AA AAAG [AAAG]19 G AAGG [AAAG]2 AG 2510
29.2 303 bp   AAAG AG [AAAG]3 AG [AAAG]10 AA AAAG [AAAG]19 G AAGG [AAAG]2 AG 2510
29.2 303 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]11 [AG]5 [AAAG]16 G AAGG [AAAG]2 AG 2510
29.2 303 bp   AAAG AG [AAAG]3 AG [AAAG]11 AA AAAG [AAAG]18 G AAGG [AAAG]2 AG 2510
29.2 303 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]11 AA AAAG [AAAG]17 G AAGG [AAAG]2 AG 2510
29.2 303 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]12 AA AAAG [AAAG]16 G AAGG [AAAG]2 AG 2510
29.2 303 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]13 AG AAAG [AAAG]15 G [AAGG]3 AG 2510
29.2 303 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]13 AA AAAG [AAAG]15 G AAGG [AAAG]2 AG 2510
29.2 303 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]14 AA AAAG [AAAG]14 G AAGG [AAAG]2 AG 2510
29.2 303 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]16 AA AAAG [AAAG]12 G AAGG [AAAG]2 AG 2510
30 305 bp     1582
30.2*^ 307 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]11 AA AAAG [AAAG]18 G AAGG [AAAG]2 AG 2510
30.2 307 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]12 AA AAAG [AAAG]17 G AAGG [AAAG]2 AG 2510
30.2 307 bp   AAAG AG [AAAG]3 AG [AAAG]12 AA AAAG [AAAG]18 G AAGG [AAAG]2 AG 2510
30.2 307 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]13 AA AAAG [AAAG]16 G AAGG [AAAG]2 AG 2510
30.2 307 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]14 AA AAAG [AAAG]15 G AAGG [AAAG]2 AG 2510
30.2 307 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]15 AA AAAG [AAAG]14 G AAGG [AAAG]2 AG 2510
31 309 bp     1582
31.2*^ 311 bp   AAAG AG [AAAG]3 AG [AAAG]9 AA AAAG [AAAG]22 G AAGG [AAAG]2 AG 2510
31.2 311 bp   AAAG AG [AAAG]3 AG [AAAG]10 AA AAAG [AAAG]21 G AAGG [AAAG]2 AG 2510
31.2 311 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]12 AA AAAG [AAAG]18 G AAGG [AAAG]2 AG 2510
31.2 311 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]13 AA AAAG [AAAG]17 G AAGG [AAAG]2 AG 2510
31.2 311 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]14 AA AAAG [AAAG]16 G AAGG [AAAG]2 AG 2510
32 313 bp     1582
32.1 314 bp      
32.2*^ 315 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]13 AA AAAG [AAAG]18 G AAGG [AAAG]2 AG 2510
32.2 315 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]14 AA AAAG [AAAG]17 G AAGG [AAAG]2 AG 2510
33 317 bp   [AAAG]2 AG [AAAG]2 AG [AAAG]10 AA AAAG [AAAG]12 AA AAAG [AAAG]9 G AAGG [AAAG]2 AG 2510
33 317 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]10 AA AAAG [AAAG]11 AA AAAG [AAAG]9 G AAGG [AAAG]2 AG 2510
33.2*^ 319 bp   AAAG AG [AAAG]3 AG [AAAG]10 AA AAAG [AAAG]23 G AAGG [AAAG]2 AG 2510
34 321 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]9 AA AAAG [AAAG]13 AA AAAG [AAAG]9 G AAGG [AAAG]2 AG 1582
34.2*^ 323 bp      
35*^ 325 bp      
35.2^ 327 bp   AAAG AG [AAAG]3 AG [AAAG]13 AA AAAG [AAAG]22 G AAGG [AAAG]2 AG 2510
36*^ 329 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]10 AA AAAG [AAAG]14 AA AAAG [AAAG]9 G AAGG [AAAG]2 AG 2510
36.2 331 bp     1582
37*^ 333 bp   [AAAG]2 AG [AAAG]3 AG [AAAG]9 AA AAAG [AAAG]16 AA AAAG [AAAG]9 G AAGG [AAAG]2 AG 2510
38 337 bp      
39 341 bp      
39.2 343 bp     1582

Known Flanking Region Mutations: see STR_Ref 516, 1702

Allelic Ladders: Commercially available from Promega (PowerPlex ES has 35 alleles) and Applied Biosystems (SEfiler has 35 alleles)

Common Multiplexes: PowerPlex ES, SEfiler

Mutation Rate: 0.64%

 

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Last Updated: 07/02/2007