D13S317

Other Names
Chromosomal Location
GenBank Accession

D13

UniSTS: 7734

13q31.1

Chr 13; 81.620 Mb (May 2004, NCBI build 35)

G09017; has 13 repeats
AL353628.2; has 11 repeats

Repeat: [GATA] = bottom strand (commonly used); [TATC] = GenBank top strand
 
Reported Primers Ref. PCR Primer Sequences

Set 1

Promega

PowerPlex 1.1 (FL labeled), PowerPlex 16 (JOE labeled) primer sequences

5'-ATTACAGAAGTCTGGGATGTGGAGGA-3'

5'-[JOE]-GGCAGCCCAAAAAGACAGA-3'

Set 2

453

5'-ACAGAAGTCTGGGATGTGGA-3'

5'-GCCCAAAAAGACAGACAGAA-3' 

Set 3

ABI

Profiler Plus (NED labeled), Identifiler (VIC labeled)

PCR Product Sizes of Observed Alleles
 

Allele

(Repeat #)

Set 1

Set 3

Repeat Structure

Ref.

5 157 bp 193 bp   variant allele
6 161 bp 197 bp   variant allele
7 165 bp 201 bp [TATC]7 721
7.1 166 bp 202 bp   variant allele
8 169 bp  205 bp [TATC]8 721
8.1 170 bp 206 bp   variant allele
9 173 bp 209 bp [TATC]9 721
10 177 bp 213 bp [TATC]10 721
10' 177 bp 213 bp [TATC]10 AATC 721
11 181 bp 217 bp [TATC]11 721
11.1 182 bp 218 bp   variant allele
11.3 184 bp 220 bp   variant allele
12 185 bp 221 bp [TATC]12 721
13 189 bp 225 bp [TATC]13 721
13.3 192 bp 228 bp   variant allele
14 193 bp 229 bp [TATC]14 721
14.3 196 bp 232 bp   variant allele
15 197 bp 233 bp [TATC]15 721
16 201 bp 237 bp   variant allele
17 205 bp 241 bp   variant allele

Allelic Ladders: Commercially available from Promega and Applied Biosystems

Common Multiplexes: PowerPlex 1.1, PowerPlex 16, Profiler Plus, Identifiler

Mutation Rate: 0.14%

 

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Last Updated: 06/28/2007