D10S1248

Other Names
Chromosomal Location
GenBank Accession
CHLC.GGAA23C05

10q26.3

chr 10: 130,566,908 bp

(NCBI July 2003 human genome assembly)

AL391869 has 13 repeats

Repeat: [GGAA]n
 
Reported Primers Ref. PCR Primer Sequences
Set 1
GDB

5'-GGAATAAGTGCAGTGCTTGG-3'

5'-ACCAATCTGGTCACAACCAT-3'
Set 2
 Coble and Butler (2005)

5'-[FAM]-TTAATGAATTGAACAAATGAGTGAG-3'

5'- GCAACTCTGGTTGTATTGTCTTCAT-3'

PCR Product Sizes of Observed Alleles
 
Allele (Repeat #)
Set 1
Set 2

miniSTR
Repeat Structure
 Ref.
8 227 bp 79 bp [GGAA]8 Simon Lim
9 231 bp 83 bp [GGAA]9  
10 235 bp 87 bp [GGAA]10  
11 239 bp 91 bp [GGAA]11  
12 243 bp 95 bp [GGAA]12  
13 247 bp 99 bp [GGAA]13  
14 251 bp 103 bp [GGAA]14  
15 255 bp 107 bp [GGAA]15  
16 259 bp 111 bp [GGAA]16  
17 263 bp 115 bp [GGAA]17  
18 267 bp 119 bp [GGAA]18  
19 271 bp 123 bp [GGAA]19  

Allelic Ladders: NIST ladder allele range: 9-19 (note nomenclature change from Coble and Butler 2005)

Assay Available: NIST NC01

Genotypes from Standard Samples: 9947A (13,15), 9948 (12,15), ABI 007 (12,15), K562 (12,12)

Population Data:  
Source Number of Samples Population
Coble and Butler (2005)/Hill et al. (2006) 265 U.S. Caucasians
Coble and Butler (2005)/Hill et al. (2006) 257 African Americans
Coble and Butler (2005)/Hill et al. (2006) 140 U.S. Hispanics
Asamura et al. (2006) IJLM 142 Japanese
Martin et al. (2006) FSI 264 Spanish
Yong et al. (2006) FSI 185 Singapore/Chinese
Yong et al. (2006) FSI 182 Singapore/Malay
Yong et al. (2006) FSI 178 Singapore/Indian
Simon Lim, in preparation 226 Chinese
Simon Lim, in preparation 238 Malaysian
Simon Lim, in preparation 238 East Indian
Prof. Ranieri Domenici, in preparation 100 Italian
     
  total = 2,415  

 Reference Sequence: GenBank accession AL391869; positions 136,773..136,874

 

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