Output for screening the Marshfield Set 12 (408 primers pairs)

http://research.marshfieldclinic.org/genetics/sets/combo.html

Note: results are best viewed in a Courier type font

Number of Hits = 1224

Number of Sequences = 816

Na+ = 0.085 Ct = 1.0

CATC015-F TAACCACCCATTCATCAACC versus GATA30E06-F TCTGTCTTAGATGGATGAATGG

Matches = 11

Score = 9

CCATTCATCNANC

est. tm = 11.5 oC

DeltaG @37 degrees = -3.74 kcal/mole

3'-GGTAAGTAGGTAGATTCTGTCT-5'

|||||||||x|x|

5'-TAACCACCCATTCATCAACC-3'

CATC015-F TAACCACCCATTCATCAACC versus GATA22F09N-F GTTCAAGCATGGGTGGATAG

Matches = 15

Score = 11

GTTNANGNATGGGTGGNTA

est. tm = 19.6 oC

DeltaG @37 degrees = -4.85 kcal/mole

5'-GTTCAAGCATGGGTGGATAG-3'

|||x|x|x||||||||x||

3'-CCAACTACTTACCCACCAAT-5'

CATC015-F TAACCACCCATTCATCAACC versus GATA178G09-F ATGGGTGGATGTACAAATGG

Matches = 9

Score = 7

ATGGGTGGNTN

est. tm = 19.8 oC

DeltaG @37 degrees = -6.21 kcal/mole

5'-ATGGGTGGATGTACAAATGG-3'

||||||||x|x

3'-CCAACTACTTACCCACCAAT-5'

CATC015-F TAACCACCCATTCATCAACC versus GATA118G10-F ACATACGGATGAATGGATGG

Matches = 12

Score = 7

CCANCCATTCATCNNNN

est. tm = 24.5 oC

DeltaG @37 degrees = -6.07 kcal/mole

3'-GGTAGGTAAGTAGGCATACA-5'

|||x|||||||||xxxx

5'-TAACCACCCATTCATCAACC-3'

CATC015-F TAACCACCCATTCATCAACC versus GATA43H01-R ACGTGGTACAGGTAGATAAATGG

Matches = 11

Score = 9

CCATTNATCNACC

est. tm = 13.5 oC

DeltaG @37 degrees = -4.25 kcal/mole

3'-GGTAAATAGATGGACATGGTGCA-5'

|||||x|||x|||

5'-TAACCACCCATTCATCAACC-3'

GATA185H04N-R ATATTTCAATATTGTAACCAGTCC versus GATA27E01-F TTTATTGAGATATATTTGACATGCA

Matches = 10

Score = 7

NNTATTGANATAT

est. tm = 0.3 oC

DeltaG @37 degrees = -1.71 kcal/mole

5'-TTTATTGAGATATATTTGACATGCA-3'

xx||||||x||||

3'-CCTGACCAATGTTATAACTTTATA-5'

ATA47D07-F TCGAGGCTGCAGTGAACTAT versus AATA036-R ACTGACTGCAGCCTTGACCT

Matches = 13

Score = 9

NNTNACTGCAGCCTNGA

est. tm = 33.4 oC

DeltaG @37 degrees = -8.43 kcal/mole

5'-ACTGACTGCAGCCTTGACCT-3'

xx|x||||||||||x||

3'-TATCAAGTGACGTCGGAGCT-5'

GATA129H04-F AGAGAACGGAACCAACAGAA versus GATA43C11-F TTCAAGTGGTTGGGTTCACT

Matches = 14

Score = 8

TTCNNNTGGTTNNGTTCNCT

est. tm = 12.7 oC

DeltaG @37 degrees = -3.07 kcal/mole

5'-TTCAAGTGGTTGGGTTCACT-3'

|||xxx|||||xx||||x||

3'-AAGACAACCAAGGCAAGAGA-5'

GATA129H04-F AGAGAACGGAACCAACAGAA versus GATA43C11-F TTCAAGTGGTTGGGTTCACT

Matches = 14

Score = 8

AGNGAACNNAACCANNNGAA

est. tm = 12.7 oC

DeltaG @37 degrees = -3.07 kcal/mole

3'-TCACTTGGGTTGGTGAACTT-5'

||x||||xx|||||xxx|||

5'-AGAGAACGGAACCAACAGAA-3'

GATA26G09N-F CTCCAGAGAAGCAGAACCAG versus PAH-F GCCAGAACAACTGCTGGTTC

Matches = 7

Score = 7

GAACCAG

est. tm = 8.5 oC

DeltaG @37 degrees = -4.45 kcal/mole

3'-CTTGGTCGTCAACAAGACCG-5'

|||||||

5'-CTCCAGAGAAGCAGAACCAG-3'

GATA109-F TAGGCAAATAATAAAATTCTAACCA versus ATA25E07-F TAATTTTAATTTTCTCCAAATCTCC

Matches = 13

Score = 7

NAATTTTANTNTTNNCCNA

est. tm = less than 0 oC

DeltaG @37 degrees = > 0 kcal/mole

5'-TAATTTTAATTTTCTCCAAATCTCC-3'

x|||||||x|x||xx||x|

3'-ACCAATCTTAAAATAATAAACGGAT-5'

GATA7C06-R TAGGATTTTACTATATTCCCCAGG versus GATA109-F TAGGCAAATAATAAAATTCTAACCA

Matches = 15

Score = 9

NNGGNANATANTAAAATNCTA

est. tm = 2.0 oC

DeltaG @37 degrees = -0.35 kcal/mole

5'-TAGGCAAATAATAAAATTCTAACCA-3'

xx||x|x|||x||||||x|||

3'-GGACCCCTTATATCATTTTAGGAT-5'

GATA61E03-R GGTATTTTTTGCCCACATGA versus GATA109-F TAGGCAAATAATAAAATTCTAACCA

Matches = 11

Score = 7

TNGGCAAANAATANN

est. tm = 10.1 oC

DeltaG @37 degrees = -3.58 kcal/mole

5'-TAGGCAAATAATAAAATTCTAACCA-3'

|x||||||x||||xx

3'-AGTACACCCGTTTTTTATGG-5'

GATA109-F TAGGCAAATAATAAAATTCTAACCA versus GATA121A08N-F GTTAACAGACTATTACCTGCCTACC

Matches = 16

Score = 9

GTTANNANNNTATTANNTGCCTA

est. tm = 14.1 oC

DeltaG @37 degrees = -2.27 kcal/mole

5'-GTTAACAGACTATTACCTGCCTACC-3'

||||xx|xxx|||||xx||||||

3'-ACCAATCTTAAAATAATAAACGGAT-5'

GATA169E06-R TGGAATTCAGTTATTTGTTAATGC versus GATA109-F TAGGCAAATAATAAAATTCTAACCA

Matches = 14

Score = 7

TNNNCAAATAANNNAATTCNA

est. tm = less than 0 oC

DeltaG @37 degrees = > 0 kcal/mole

5'-TAGGCAAATAATAAAATTCTAACCA-3'

|xxx|||||||xxx|||||x|

3'-CGTAATTGTTTATTGACTTAAGGT-5'

GATA124C08N-F TTCTAACAAGCTCCCAGGTG versus GATA5D08-R TATGACAGGCATCTGGGAGT

Matches = 9

Score = 7

NCTCCCAGNTG

est. tm = 17.4 oC

DeltaG @37 degrees = -5.60 kcal/mole

3'-TGAGGGTCTACGGACAGTAT-5'

x|||||||x||

5'-TTCTAACAAGCTCCCAGGTG-3'

GATA124C08N-F TTCTAACAAGCTCCCAGGTG versus GATA193A07-R AGCCTGTGGCATCTTGTTAG

Matches = 13

Score = 8

CTAACAAGNTNCCANNNG

est. tm = 8.8 oC

DeltaG @37 degrees = -2.40 kcal/mole

3'-GATTGTTCTACGGTGTCCGA-5'

||||||||x|x|||xxx|

5'-TTCTAACAAGCTCCCAGGTG-3'

GATA124C08N-F TTCTAACAAGCTCCCAGGTG versus GATA176C01-F TCTCACTACACCACCTGGGT

Matches = 8

Score = 7

NCCCAGGTG

est. tm = 25.8 oC

DeltaG @37 degrees = -7.24 kcal/mole

3'-TGGGTCCACCACATCACTCT-5'

x||||||||

5'-TTCTAACAAGCTCCCAGGTG-3'

GATA124C08N-F TTCTAACAAGCTCCCAGGTG versus ATA7D07-R ACGGGAGCTTTTGAGAAGTT

Matches = 13

Score = 9

NNGGGAGCTTNTNAGAA

est. tm = 27.8 oC

DeltaG @37 degrees = -7.00 kcal/mole

5'-ACGGGAGCTTTTGAGAAGTT-3'

xx||||||||x|x||||

3'-GTGGACCCTCGAACAATCTT-5'

ATA25E07-F TAATTTTAATTTTCTCCAAATCTCC versus ATA50C05-F TTTGGAAAGAATCTGTATTATCTTT

Matches = 14

Score = 8

TTTGGANANAATNNNNATTA

est. tm = 4.0 oC

DeltaG @37 degrees = -0.92 kcal/mole

5'-TTTGGAAAGAATCTGTATTATCTTT-3'

||||||x|x|||xxxx||||

3'-CCTCTAAACCTCTTTTAATTTTAAT-5'

ATA21F01-R ATGACCAAAATGAAAATCACTG versus ATA25E07-F TAATTTTAATTTTCTCCAAATCTCC

Matches = 13

Score = 7

TNATTTTNATTTTNNNCAN

est. tm = 1.8 oC

DeltaG @37 degrees = -0.92 kcal/mole

5'-TAATTTTAATTTTCTCCAAATCTCC-3'

|x|||||x|||||xxx||x

3'-GTCACTAAAAGTAAAACCAGTA-5'

GATA64G07-R AGACTTGGACTGAATTACACTGC versus ATA25E07-F TAATTTTAATTTTCTCCAAATCTCC

Matches = 15

Score = 7

NNANTNTAATTNNNTCCAANTCT

est. tm = 5.3 oC

DeltaG @37 degrees = -1.02 kcal/mole

5'-TAATTTTAATTTTCTCCAAATCTCC-3'

xx|x|x|||||xxx|||||x|||

3'-CGTCACATTAAGTCAGGTTCAGA-5'

AAAAC001-R CCTTTGGAGAAAACTGAACTCG versus ATA25E07-F TAATTTTAATTTTCTCCAAATCTCC

Matches = 15

Score = 8

NNANTTNANTTTTCTCCAAANN

est. tm = 21.0 oC

DeltaG @37 degrees = -4.70 kcal/mole

5'-TAATTTTAATTTTCTCCAAATCTCC-3'

xx|x||x|x|||||||||||xx

3'-GCTCAAGTCAAAAGAGGTTTCC-5'

ATA7D07-R ACGGGAGCTTTTGAGAAGTT versus ATA25E07-F TAATTTTAATTTTCTCCAAATCTCC

Matches = 13

Score = 9

GGAGNTTTNGAGAANNT

est. tm = 10.4 oC

DeltaG @37 degrees = -3.01 kcal/mole

3'-CCTCTAAACCTCTTTTAATTTTAAT-5'

||||x|||x|||||xx|

5'-ACGGGAGCTTTTGAGAAGTT-3'

ATA25E07-F TAATTTTAATTTTCTCCAAATCTCC versus GATA165B12-R TTAAAATCATTTTCACTGTGTATGC

Matches = 8

Score = 7

TTAAAATNA

est. tm = less than 0 oC

DeltaG @37 degrees = -0.54 kcal/mole

5'-TTAAAATCATTTTCACTGTGTATGC-3'

|||||||x|

3'-CCTCTAAACCTCTTTTAATTTTAAT-5'

GATA12A07N-F AGCACATAGCAGGCACTAGC versus ATA26B08-F ACTGGTATGTCCTAACCCCC

Matches = 10

Score = 7

NCTGNTATGTNCT

est. tm = 0.9 oC

DeltaG @37 degrees = -2.53 kcal/mole

5'-ACTGGTATGTCCTAACCCCC-3'

x|||x|||||x||

3'-CGATCACGGACGATACACGA-5'

GATA71C09-F GAGTTGCGTTACTTGATTTCTT versus GGAA5F09-F GCCATCAAGAAAACTAGTACTGC

Matches = 13

Score = 9

GCNNTACTNGNTTTCTT

est. tm = 10.1 oC

DeltaG @37 degrees = -2.83 kcal/mole

3'-CGTCATGATCAAAAGAACTACCG-5'

||xx||||x|x||||||

5'-GAGTTGCGTTACTTGATTTCTT-3'

TATC028-F CTGCATGACCTTGGGAAAAT versus ATT001-F GCCATGCAGGAAGGAGTAGA

Matches = 8

Score = 7

GNCATGCAG

est. tm = 6.3 oC

DeltaG @37 degrees = -3.90 kcal/mole

5'-GCCATGCAGGAAGGAGTAGA-3'

|x|||||||

3'-TAAAAGGGTTCCAGTACGTC-5'

TATC028-F CTGCATGACCTTGGGAAAAT versus GATA7C06-R TAGGATTTTACTATATTCCCCAGG

Matches = 10

Score = 8

CCTNGGGAANAT

est. tm = 6.9 oC

DeltaG @37 degrees = -3.80 kcal/mole

3'-GGACCCCTTATATCATTTTAGGAT-5'

|||x|||||x||

5'-CTGCATGACCTTGGGAAAAT-3'

GATA7C01-F TGCAGATCTTGGGACTTCTC versus GATA124F08-R GAGAAAGAAGCCCCAAGAAC

Matches = 13

Score = 10

GNTCTTGGGNCTTCTN

est. tm = 29.3 oC

DeltaG @37 degrees = -7.36 kcal/mole

3'-CAAGAACCCCGAAGAAAGAG-5'

|x|||||||x|||||x

5'-TGCAGATCTTGGGACTTCTC-3'

GATA7C01-F TGCAGATCTTGGGACTTCTC versus ATA26B08-R GATCTGCAGTTGGATTCTGG

Matches = 8

Score = 8

GATCTGCA

est. tm = 17.8 oC

DeltaG @37 degrees = -5.69 kcal/mole

5'-GATCTGCAGTTGGATTCTGG-3'

||||||||

3'-CTCTTCAGGGTTCTAGACGT-5'

GATA7C01-F TGCAGATCTTGGGACTTCTC versus GATA14E09-R GTCATAATATCTGCCAATGATTG

Matches = 11

Score = 7

GTCNNAANATCTGCN

est. tm = 15.5 oC

DeltaG @37 degrees = -4.56 kcal/mole

5'-GTCATAATATCTGCCAATGATTG-3'

|||xx||x||||||x

3'-CTCTTCAGGGTTCTAGACGT-5'

GATA124F08-F TATCTAGCTGGCTGGCTAGC versus GGAA22G10N-F AGTCAGCTTGATTGATCCAG

Matches = 10

Score = 7

AGNCAGCTNGATN

est. tm = 10.2 oC

DeltaG @37 degrees = -4.25 kcal/mole

5'-AGTCAGCTTGATTGATCCAG-3'

||x|||||x|||x

3'-CGATCGGTCGGTCGATCTAT-5'

GATA124F08-F TATCTAGCTGGCTGGCTAGC versus GATA27C08N-F GGCAGGCAGGTAGATAGACA

Matches = 13

Score = 10

GNCAGNCAGNTAGATA

est. tm = 7.8 oC

DeltaG @37 degrees = -2.46 kcal/mole

5'-GGCAGGCAGGTAGATAGACA-3'

|x|||x|||x||||||

3'-CGATCGGTCGGTCGATCTAT-5'

GATA11E02N-F TTGCCTTGTTAACATGTACAGG versus ATA29C07-F TTTCTCACCTTTAAATGTCATCA

Matches = 12

Score = 8

TGNTNACATNTANAGG

est. tm = less than zero

DeltaG @37 degrees = -0.85 kcal/mole

3'-ACTACTGTAAATTTCCACTCTTT-5'

||x|x||||x||x|||

5'-TTGCCTTGTTAACATGTACAGG-3'

GATA32F05-R AAGGTCAGAATCCCTCATCC versus ATA29C07-F TTTCTCACCTTTAAATGTCATCA

Matches = 9

Score = 7

NTTCTNACCTT

est. tm = 9.8 oC

DeltaG @37 degrees = -4.28 kcal/mole

5'-TTTCTCACCTTTAAATGTCATCA-3'

x||||x|||||

3'-CCTACTCCCTAAGACTGGAA-5'

GATA22D12-F TGCTATCAAATGACAAAGTTAGC versus GATA187D09N-F CTTAGTCTTTTCTTACCAAAACAGC

Matches = 13

Score = 8

CTTNGTCNTTTNNTANCA

est. tm = less than 0 oC

DeltaG @37 degrees = -0.09 kcal/mole

5'-CTTAGTCTTTTCTTACCAAAACAGC-3'

|||x|||x|||xx||x||

3'-CGATTGAAACAGTAAACTATCGT-5'

GATA72G09N-R TTGGTGATTTAATTCCAGGC versus GATA22D12-F TGCTATCAAATGACAAAGTTAGC

Matches = 12

Score = 7

TGNNATNAAATNACNAA

est. tm = less than 0 oC

DeltaG @37 degrees = > 0 kcal/mole

5'-TGCTATCAAATGACAAAGTTAGC-3'

||xx||x||||x||x||

3'-CGGACCTTAATTTAGTGGTT-5'

AAT243-F AATCGCTTGAACCCAGGAG versus TTTA049-F TCCATGCGATTTATCCAAGA

Matches = 9

Score = 7

TNCANGCGATT

est. tm = 0.4 oC

DeltaG @37 degrees = -3.11 kcal/mole

5'-TCCATGCGATTTATCCAAGA-3'

|x||x||||||

3'-GAGGACCCAAGTTCGCTAA-5'

GGAA20G10-F TGGAATCGTTTTACCTCTGC versus GATA168F06-F ACAATTCCAGAAACTTCCCC

Matches = 8

Score = 7

ACNATTCCA

est. tm = less than 0 oC

DeltaG @37 degrees = -2.95 kcal/mole

5'-ACAATTCCAGAAACTTCCCC-3'

||x||||||

3'-CGTCTCCATTTTGCTAAGGT-5'

GGAA20G10-F TGGAATCGTTTTACCTCTGC versus UT7136-F AGGAGGCAGAGGTTACAGTA

Matches = 11

Score = 7

TNNTNTNACCTCTGC

est. tm = 4.8 oC

DeltaG @37 degrees = -3.04 kcal/mole

3'-ATGACATTGGAGACGGAGGA-5'

|xx|x|x||||||||

5'-TGGAATCGTTTTACCTCTGC-3'

GATA8F07-F CAGAAGCGTGGCAGTTTATT versus GATA89A11-F GCTTCTGAAAGCTTCTAGTTTACC

Matches = 7

Score = 7

GCTTCTG

est. tm = 10.4 oC

DeltaG @37 degrees = -4.69 kcal/mole

5'-GCTTCTGAAAGCTTCTAGTTTACC-3'

|||||||

3'-TTATTTGACGGTGCGAAGAC-5'

ATA47C04N-F TCTCTCACACAAAAAAACCC versus GATA164B08N-R TGGGGTATCCTGTGTCAGAGC

Matches = 14

Score = 8

NCTCTNACACANNANANCCC

est. tm = 16.6 oC

DeltaG @37 degrees = -4.37 kcal/mole

3'-CGAGACTGTGTCCTATGGGGT-5'

x||||x|||||xx|x|x|||

5'-TCTCTCACACAAAAAAACCC-3'

ATA47C04N-F TCTCTCACACAAAAAAACCC versus AGAT113Z-R CGCTACCACGGGTGTTTTTA

Matches = 9

Score = 7

NAAAAANACCC

est. tm = 10.9 oC

DeltaG @37 degrees = -4.30 kcal/mole

3'-ATTTTTGTGGGCACCATCGC-5'

x|||||x||||

5'-TCTCTCACACAAAAAAACCC-3'

GATA66D01-F TAATTCAAATCTTTCCTGTCAGG versus GATA66D01-F TAATTCAAATCTTTCCTGTCAGG

Matches = 8

Score = 7

CCTGNCAGG

est. tm = 7.3 oC

DeltaG @37 degrees = -4.28 kcal/mole

3'-GGACTGTCCTTTCTAAACTTAAT-5'

||||x||||

5'-TAATTCAAATCTTTCCTGTCAGG-3'

ATT001-F GCCATGCAGGAAGGAGTAGA versus GATA66D01-F TAATTCAAATCTTTCCTGTCAGG

Matches = 13

Score = 7

CCNNNCAGGAANGANTNGA

est. tm = 1.5 oC

DeltaG @37 degrees = -1.62 kcal/mole

3'-GGACTGTCCTTTCTAAACTTAAT-5'

||xxx||||||x||x|x||

5'-GCCATGCAGGAAGGAGTAGA-3'

GATA66D01-F TAATTCAAATCTTTCCTGTCAGG versus GATA66D01-R TAATTCAAATCTTTCCTGTCAGG

Matches = 8

Score = 7

CCTGNCAGG

est. tm = 7.3 oC

DeltaG @37 degrees = -4.28 kcal/mole

3'-GGACTGTCCTTTCTAAACTTAAT-5'

||||x||||

5'-TAATTCAAATCTTTCCTGTCAGG-3'

GATA88G05-F ACATGTCGATCTCAGCGTTC versus ATGT006Z-F AAGGCTGAGGTAGGCTTATTTTT

Matches = 13

Score = 7

AANGCTGAGNTNGNCNTNT

est. tm = less than 0 oC

DeltaG @37 degrees = > 0 kcal/mole

5'-AAGGCTGAGGTAGGCTTATTTTT-3'

||x||||||x|x|x|x|x|

3'-CTTGCGACTCTAGCTGTACA-5'

GATA4E11-F TGAGCGGAATGAAAAGAGAG versus GATA31F01-F TTGGTACTTAATAAACCCTCTTTT

Matches = 8

Score = 7

AAAAGAGNG

est. tm = less than zero

DeltaG @37 degrees = -2.00 kcal/mole

3'-TTTTCTCCCAAATAATTCATGGTT-5'

|||||||x|

5'-TGAGCGGAATGAAAAGAGAG-3'

GATA4D07-F AGGCCTCTCTTCGAATGATT versus GGAA20G10-R TATAGGTCAACGATAACTCATTCG

Matches = 8

Score = 7

CGAATGANT

est. tm = 1.6 oC

DeltaG @37 degrees = -3.21 kcal/mole

3'-GCTTACTCAATAGCAACTGGATAT-5'

|||||||x|

5'-AGGCCTCTCTTCGAATGATT-3'

GATA4D07-F AGGCCTCTCTTCGAATGATT versus GATA43H03N-R ATTTGAACAGAGGCATGTAC

Matches = 13

Score = 10

ATTNGAANAGAGGCNT

est. tm = 15.6 oC

DeltaG @37 degrees = -4.41 kcal/mole

5'-ATTTGAACAGAGGCATGTAC-3'

|||x|||x||||||x|

3'-TTAGTAAGCTTCTCTCCGGA-5'

GATA62F03N-R AGCCAAAATGTTATGCAAG versus ATA27H09-F CCAGGGACATTGCTTAACAT

Matches = 10

Score = 8

ATGTTANGCAAN

est. tm = 18.1 oC

DeltaG @37 degrees = -5.30 kcal/mole

3'-TACAATTCGTTACAGGGACC-5'

||||||x||||x

5'-AGCCAAAATGTTATGCAAG-3'

ATA27H09-F CCAGGGACATTGCTTAACAT versus GATA81D12-R TAATGTACCTGGTACCAAAAACA

Matches = 10

Score = 8

NAATGTNCCTGG

est. tm = 21.6 oC

DeltaG @37 degrees = -6.06 kcal/mole

5'-TAATGTACCTGGTACCAAAAACA-3'

x|||||x|||||

3'-TACAATTCGTTACAGGGACC-5'

ATA27H09-F CCAGGGACATTGCTTAACAT versus GATA4A10-R TCCCTGGGTGAAAATGAGTA

Matches = 7

Score = 7

TCCCTGG

est. tm = 13.4 oC

DeltaG @37 degrees = -5.58 kcal/mole

5'-TCCCTGGGTGAAAATGAGTA-3'

|||||||

3'-TACAATTCGTTACAGGGACC-5'

GGAA30H04-F ATTCTTCTCCCAAGAATGCC versus GATA65C03N-F CTCACTGTCTGGATTTCTTGG

Matches = 9

Score = 7

CCAAGAANNCC

est. tm = 9.2 oC

DeltaG @37 degrees = -3.91 kcal/mole

3'-GGTTCTTTAGGTCTGTCACTC-5'

|||||||xx||

5'-ATTCTTCTCCCAAGAATGCC-3'

AAAT072-R ACTCCACCCAGGAAGTCCA versus GATA65C03N-F CTCACTGTCTGGATTTCTTGG

Matches = 10

Score = 8

CCANGAANTCCA

est. tm = 9.2 oC

DeltaG @37 degrees = -4.05 kcal/mole

3'-GGTTCTTTAGGTCTGTCACTC-5'

|||x|||x||||

5'-ACTCCACCCAGGAAGTCCA-3'

GATA65C03N-F CTCACTGTCTGGATTTCTTGG versus GATA10G07-F AATCCAGTAAATGAAATAGTCATCA

Matches = 11

Score = 7

AATCCAGNNANTGAN

est. tm = 12.3 oC

DeltaG @37 degrees = -4.10 kcal/mole

5'-AATCCAGTAAATGAAATAGTCATCA-3'

|||||||xx|x|||x

3'-GGTTCTTTAGGTCTGTCACTC-5'

UT7544-F ACTCCAGTCTGTGTGACAG versus GATA65C03N-F CTCACTGTCTGGATTTCTTGG

Matches = 11

Score = 7

CNCACNGNCTGGANT

est. tm = less than 0 oC

DeltaG @37 degrees = -0.98 kcal/mole

5'-CTCACTGTCTGGATTTCTTGG-3'

|x|||x|x|||||x|

3'-GACAGTGTGTCTGACCTCA-5'

GATA7G10-R GCCCAAAAAGACAGACAGAA versus GATA65C03N-F CTCACTGTCTGGATTTCTTGG

Matches = 13

Score = 7

CCNANAAANNCAGACAGNN

est. tm = 14.4 oC

DeltaG @37 degrees = -3.80 kcal/mole

3'-GGTTCTTTAGGTCTGTCACTC-5'

||x|x|||xx|||||||xx

5'-GCCCAAAAAGACAGACAGAA-3'

GATA30E06-F TCTGTCTTAGATGGATGAATGG versus GATA13-R AGACAGAAATATAGATGAGAATGCA

Matches = 7

Score = 7

AGACAGA

est. tm = 4.0 oC

DeltaG @37 degrees = -4.09 kcal/mole

5'-AGACAGAAATATAGATGAGAATGCA-3'

|||||||

3'-GGTAAGTAGGTAGATTCTGTCT-5'

GATA30E06-F TCTGTCTTAGATGGATGAATGG versus GATA129D11N-R TAGTACTCTACCATCCATCTATCCC

Matches = 11

Score = 7

NNGATNGATGNATGG

est. tm = 8.7 oC

DeltaG @37 degrees = -3.21 kcal/mole

3'-CCCTATCTACCTACCATCTCATGAT-5'

xx|||x||||x||||

5'-TCTGTCTTAGATGGATGAATGG-3'

GGAT3F08-R TATCCATCCATCCATCAACC versus GATA30E06-F TCTGTCTTAGATGGATGAATGG

Matches = 10

Score = 7

CCATNCATCNANC

est. tm = less than zero

DeltaG @37 degrees = -1.01 kcal/mole

3'-GGTAAGTAGGTAGATTCTGTCT-5'

||||x||||x|x|

5'-TATCCATCCATCCATCAACC-3'

GGAT3F08-R TATCCATCCATCCATCAACC versus GATA30E06-F TCTGTCTTAGATGGATGAATGG

Matches = 13

Score = 9

CCATNCATCCATCNANN

est. tm = 25.4 oC

DeltaG @37 degrees = -6.33 kcal/mole

3'-GGTAAGTAGGTAGATTCTGTCT-5'

||||x||||||||x|xx

5'-TATCCATCCATCCATCAACC-3'

GATA23A02-F AGAAACAGAACGGATAGGGT versus GATA64F08-R TGACACTATCAGCTCTCTGGC

Matches = 13

Score = 7

GNNANAGANCNGATAGNGT

est. tm = less than zero

DeltaG @37 degrees = greater than zero

3'-CGGTCTCTCGACTATCACAGT-5'

|xx|x|||x|x|||||x||

5'-AGAAACAGAACGGATAGGGT-3'

GATA23A02-F AGAAACAGAACGGATAGGGT versus GATA29A05-F TTTTGTTTCTTGATCTGGGC

Matches = 9

Score = 8

TTNTGTTTCT

est. tm = 4.3 oC

DeltaG @37 degrees = -3.29 kcal/mole

5'-TTTTGTTTCTTGATCTGGGC-3'

||x|||||||

3'-TGGGATAGGCAAGACAAAGA-5'

ATA78D02N-F GGCAAGAGTTTTCCCATTTT versus AGAT021-F GAAACTCCAAAGATGGCAAAA

Matches = 10

Score = 8

TTTTNCCATNTT

est. tm = less than zero

DeltaG @37 degrees = -1.99 kcal/mole

3'-AAAACGGTAGAAACCTCAAAG-5'

||||x||||x||

5'-GGCAAGAGTTTTCCCATTTT-3'

GATA175D03-F TGGAGTCTCTGGGTGAAGAG versus AGAT021-F GAAACTCCAAAGATGGCAAAA

Matches = 8

Score = 7

GANACTCCA

est. tm = 3.3 oC

DeltaG @37 degrees = -3.73 kcal/mole

5'-GAAACTCCAAAGATGGCAAAA-3'

||x||||||

3'-GAGAAGTGGGTCTCTGAGGT-5'

GATA4G12-R GCCATCTGTACTGTTCCCAG versus AGAT021-F GAAACTCCAAAGATGGCAAAA

Matches = 12

Score = 7

GNAACNNNANAGATGGC

est. tm = 7.7 oC

DeltaG @37 degrees = -2.74 kcal/mole

5'-GAAACTCCAAAGATGGCAAAA-3'

|x|||xxx|x|||||||

3'-GACCCTTGTCATGTCTACCG-5'

GATA164B08N-F CTGTGATCACACCACTGCAG versus GATA164B08N-F CTGTGATCACACCACTGCAG

Matches = 10

Score = 8

NTGTGATCACAN

est. tm = 33.3 oC

DeltaG @37 degrees = -8.47 kcal/mole

5'-CTGTGATCACACCACTGCAG-3'

x||||||||||x

3'-GACGTCACCACACTAGTGTC-5'

GATA164B08N-F CTGTGATCACACCACTGCAG versus ATA34G06-F GATCACAGGTTAATGGGTGC

Matches = 8

Score = 8

GATCACAG

est. tm = 14.7 oC

DeltaG @37 degrees = -4.97 kcal/mole

5'-GATCACAGGTTAATGGGTGC-3'

||||||||

3'-GACGTCACCACACTAGTGTC-5'

GATA164B08N-F CTGTGATCACACCACTGCAG versus UT5029-R AAATCATCAGTGGAGTTAGCA

Matches = 12

Score = 7

TGNTNACNCCACTGNNG

est. tm = less than zero

DeltaG @37 degrees = -1.62 kcal/mole

3'-ACGATTGAGGTGACTACTAAA-5'

||x|x||x||||||xx|

5'-CTGTGATCACACCACTGCAG-3'

GATA164B08N-F CTGTGATCACACCACTGCAG versus GATA23B01N-F GTGTAAGCAGTGTGCAGTGG

Matches = 8

Score = 7

CCACTGCAN

est. tm = 28.4 oC

DeltaG @37 degrees = -7.68 kcal/mole

3'-GGTGACGTGTGACGAATGTG-5'

||||||||x

5'-CTGTGATCACACCACTGCAG-3'

GATA164B08N-F CTGTGATCACACCACTGCAG versus GATA43C11-R TGGGTCTAGTCCAGTGGTGT

Matches = 10

Score = 8

ACACCACTGNAN

est. tm = 26.1 oC

DeltaG @37 degrees = -7.05 kcal/mole

3'-TGTGGTGACCTGATCTGGGT-5'

|||||||||x|x

5'-CTGTGATCACACCACTGCAG-3'

GATA73D01-F CATCTTTCTTTTCCTGTTCCC versus GATA65C03N-R TAAGAACAAGTAAAAAAAGCTGG

Matches = 15

Score = 9

NNGAACANGNAAANAAAGNTG

est. tm = 12.9 oC

DeltaG @37 degrees = -2.77 kcal/mole

5'-TAAGAACAAGTAAAAAAAGCTGG-3'

xx|||||x|x|||x||||x||

3'-CCCTTGTCCTTTTCTTTCTAC-5'

GGAA2A03-F CCTGGGCAACAGAATAAGAT versus GATA73D01-F CATCTTTCTTTTCCTGTTCCC

Matches = 12

Score = 8

GGNAACAGNANAAGAN

est. tm = 12.7 oC

DeltaG @37 degrees = -3.99 kcal/mole

3'-CCCTTGTCCTTTTCTTTCTAC-5'

||x|||||x|x||||x

5'-CCTGGGCAACAGAATAAGAT-3'

GATA73D01-F CATCTTTCTTTTCCTGTTCCC versus GATA22G05-R AAAACAAATATGGCTCTATCTATCG

Matches = 10

Score = 8

AAAANAAANATG

est. tm = less than 0 oC

DeltaG @37 degrees = -1.23 kcal/mole

5'-AAAACAAATATGGCTCTATCTATCG-3'

||||x|||x|||

3'-CCCTTGTCCTTTTCTTTCTAC-5'

GATA73D01-F CATCTTTCTTTTCCTGTTCCC versus GATA46A12-R AAAGAGTAAACTCAATGAAAGATGC

Matches = 14

Score = 7

GNGNANANNNAANGAAAGATG

est. tm = less than zero

DeltaG @37 degrees = greater than zero

5'-AAAGAGTAAACTCAATGAAAGATGC-3'

|x|x|x|xxx||x||||||||

3'-CCCTTGTCCTTTTCTTTCTAC-5'

GATA6F06-F ACCACATGAGCCAATTCTGT versus ATTT019-R TTCATGGCCACAGAATTCAC

Matches = 9

Score = 7

GNNAATTCTGT

est. tm = 1.4 oC

DeltaG @37 degrees = -2.52 kcal/mole

3'-CACTTAAGACACCGGTACTT-5'

|xx||||||||

5'-ACCACATGAGCCAATTCTGT-3'

GATA6F06-F ACCACATGAGCCAATTCTGT versus GATA11B12-R GGTGGAAATGCCTCATGTAG

Matches = 13

Score = 7

CNACATGAGNCANTTCNNN

est. tm = 12.7 oC

DeltaG @37 degrees = -3.32 kcal/mole

3'-GATGTACTCCGTAAAGGTGG-5'

|x|||||||x||x|||xxx

5'-ACCACATGAGCCAATTCTGT-3'

GATA6F06-F ACCACATGAGCCAATTCTGT versus GGAA4B09N-F ACAGAATGAGACCATGTGTCA

Matches = 14

Score = 8

ACAGAATNNGNNCATGTGNN

est. tm = 23.3 oC

DeltaG @37 degrees = -5.45 kcal/mole

5'-ACAGAATGAGACCATGTGTCA-3'

|||||||xx|xx||||||xx

3'-TGTCTTAACCGAGTACACCA-5'

GATA6F06-F ACCACATGAGCCAATTCTGT versus ATA19H08-F TTCCAGAGTATTTGCTTAAGAGG

Matches = 13

Score = 7

CCNCNTNAGCNAATNCTNT

est. tm = less than zero

DeltaG @37 degrees = greater than zero

3'-GGAGAATTCGTTTATGAGACCTT-5'

||x|x|x|||x|||x||x|

5'-ACCACATGAGCCAATTCTGT-3'

GATA6F06-F ACCACATGAGCCAATTCTGT versus GATA64H04-F GATGATAGAGATGGCACATGA

Matches = 12

Score = 7

NCATGNGCCANNTCTNT

est. tm = 12.8 oC

DeltaG @37 degrees = -4.10 kcal/mole

3'-AGTACACGGTAGAGATAGTAG-5'

x||||x||||xx|||x|

5'-ACCACATGAGCCAATTCTGT-3'

ATA22G07-R TGCTCTGTCTATGGAGTAGCC versus GATA7F05-F TCCAGAGAAACAGAATCAATAGG

Matches = 11

Score = 7

TCCANAGANANAGNA

est. tm = less than 0 oC

DeltaG @37 degrees = -0.61 kcal/mole

5'-TCCAGAGAAACAGAATCAATAGG-3'

||||x|||x|x||x|

3'-CCGATGAGGTATCTGTCTCGT-5'

GATA31D10-F GTGGGACCTTGTGATTGTGT versus GATA7F05-F TCCAGAGAAACAGAATCAATAGG

Matches = 11

Score = 8

CCTNNTGATTNTGT

est. tm = 10.0 oC

DeltaG @37 degrees = -3.55 kcal/mole

3'-GGATAACTAAGACAAAGAGACCT-5'

|||xx|||||x|||

5'-GTGGGACCTTGTGATTGTGT-3'

GATA84B12-F ACCAAATGAGACAGTGGCAT versus ATA5A04N-F TGCCACTGACTTCATTGCTA

Matches = 14

Score = 9

TGCCACTGNCTNNNTTGNT

est. tm = 22.3 oC

DeltaG @37 degrees = -5.54 kcal/mole

5'-TGCCACTGACTTCATTGCTA-3'

||||||||x||xxx|||x|

3'-TACGGTGACAGAGTAAACCA-5'

GATA84B12-F ACCAAATGAGACAGTGGCAT versus ATTT019-F GCTGCCACTTTCCCTTTTAC

Matches = 13

Score = 7

NNAAANGNGANAGTGGCAN

est. tm = 22.2 oC

DeltaG @37 degrees = -5.72 kcal/mole

3'-CATTTTCCCTTTCACCGTCG-5'

xx|||x|x||x|||||||x

5'-ACCAAATGAGACAGTGGCAT-3'

GATA84B12-F ACCAAATGAGACAGTGGCAT versus GATA12F04-R TATAGGCACATGCCACTGTG

Matches = 10

Score = 9

NACAGTGGCAT

est. tm = 35.3 oC

DeltaG @37 degrees = -8.98 kcal/mole

3'-GTGTCACCGTACACGGATAT-5'

x||||||||||

5'-ACCAAATGAGACAGTGGCAT-3'

GATA84B12-F ACCAAATGAGACAGTGGCAT versus ATA28C05-F TGTCTGCTAATGAATGATTTGG

Matches = 13

Score = 7

CCAAATNANNCANTNGCAN

est. tm = 9.1 oC

DeltaG @37 degrees = -3.03 kcal/mole

3'-GGTTTAGTAAGTAATCGTCTGT-5'

||||||x|xx||x|x|||x

5'-ACCAAATGAGACAGTGGCAT-3'

ATA34G06-F GATCACAGGTTAATGGGTGC versus TTAT023z-R CCTGTAATCCCAGCTGCTCT

Matches = 8

Score = 7

CCTGTNATC

est. tm = 2.1 oC

DeltaG @37 degrees = -3.35 kcal/mole

5'-CCTGTAATCCCAGCTGCTCT-3'

|||||x|||

3'-CGTGGGTAATTGGACACTAG-5'

ATA34G06-F GATCACAGGTTAATGGGTGC versus GGAT3F08-R TATCCATCCATCCATCAACC

Matches = 10

Score = 7

GGTTNATGGNTGN

est. tm = 12.0 oC

DeltaG @37 degrees = -4.49 kcal/mole

3'-CCAACTACCTACCTACCTAT-5'

||||x||||x||x

5'-GATCACAGGTTAATGGGTGC-3'

GATA3C02-F TTTAAGCGGAAGGAAGTGTG versus ATA29C03-F GACTCTGCTAAGCACATTTCC

Matches = 8

Score = 7

GGAANTGTG

est. tm = 4.6 oC

DeltaG @37 degrees = -3.66 kcal/mole

3'-CCTTTACACGAATCGTCTCAG-5'

||||x||||

5'-TTTAAGCGGAAGGAAGTGTG-3'

GATA3C02-F TTTAAGCGGAAGGAAGTGTG versus ATA47C04N-R AACATATCCTTCCCCTTCCA

Matches = 14

Score = 8

NACANNTCCTTCCNCTTNNA

est. tm = 19.2 oC

DeltaG @37 degrees = -4.75 kcal/mole

5'-AACATATCCTTCCCCTTCCA-3'

x|||xx|||||||x|||xx|

3'-GTGTGAAGGAAGGCGAATTT-5'

GATA3C02-F TTTAAGCGGAAGGAAGTGTG versus ATA47C04N-R AACATATCCTTCCCCTTCCA

Matches = 14

Score = 8

TNNAAGNGGAAGGANNTGTN

est. tm = 20.8 oC

DeltaG @37 degrees = -5.15 kcal/mole

3'-ACCTTCCCCTTCCTATACAA-5'

|xx|||x|||||||xx|||x

5'-TTTAAGCGGAAGGAAGTGTG-3'

GATA3C02-F TTTAAGCGGAAGGAAGTGTG versus GATA30D09N-F TCCAAGTAAAGGCCAGACTTCC

Matches = 8

Score = 7

GGAAGTNTG

est. tm = 3.3 oC

DeltaG @37 degrees = -3.49 kcal/mole

3'-CCTTCAGACCGGAAATGAACCT-5'

||||||x||

5'-TTTAAGCGGAAGGAAGTGTG-3'

GATA3C02-F TTTAAGCGGAAGGAAGTGTG versus GATA32B03-R AGGTATGGTGCCACACACTT

Matches = 7

Score = 7

AAGTGTG

est. tm = 6.1 oC

DeltaG @37 degrees = -4.16 kcal/mole

3'-TTCACACACCGTGGTATGGA-5'

|||||||

5'-TTTAAGCGGAAGGAAGTGTG-3'

GATA3H01-F AAACCGCTGTGCACTTTATC versus ATA27F01-F GAGTTTGAAAATAAAGTGTTCTGC

Matches = 11

Score = 7

GCNGNNCACTTTATN

est. tm = 10.9 oC

DeltaG @37 degrees = -3.54 kcal/mole

3'-CGTCTTGTGAAATAAAAGTTTGAG-5'

||x|xx||||||||x

5'-AAACCGCTGTGCACTTTATC-3'

GATA3H01-F AAACCGCTGTGCACTTTATC versus ATA18A07-R TATATGAAGTGCTTAGAAAAAGTGC

Matches = 9

Score = 8

GCACTTTNTC

est. tm = 13.5 oC

DeltaG @37 degrees = -4.63 kcal/mole

3'-CGTGAAAAAGATTCGTGAAGTATAT-5'

|||||||x||

5'-AAACCGCTGTGCACTTTATC-3'

TTTA040-F GGGTGCAGTTTTTCTCTGCT versus GATA73D10N-F TCATGACAAAACAGAAAATAAGTG

Matches = 11

Score = 7

CANTTNTTNTCTGNT

est. tm = less than zero

DeltaG @37 degrees = greater than zero

3'-GTGAATAAAAGACAAAACAGTACT-5'

||x||x||x||||x|

5'-GGGTGCAGTTTTTCTCTGCT-3'

TTTA040-F GGGTGCAGTTTTTCTCTGCT versus GATA8G10-F GGGACAGAGAAGCAGAGAAG

Matches = 9

Score = 8

NTTCTCTGCT

est. tm = 25.6 oC

DeltaG @37 degrees = -6.95 kcal/mole

3'-GAAGAGACGAAGAGACAGGG-5'

x|||||||||

5'-GGGTGCAGTTTTTCTCTGCT-3'

AAAT072-R ACTCCACCCAGGAAGTCCA versus TTTA040-F GGGTGCAGTTTTTCTCTGCT

Matches = 8

Score = 7

GGGTGNAGT

est. tm = 6.8 oC

DeltaG @37 degrees = -4.38 kcal/mole

5'-GGGTGCAGTTTTTCTCTGCT-3'

|||||x|||

3'-ACCTGAAGGACCCACCTCA-5'

GATA49C09N-F GCAACAGAGCAAGACTGTC versus TTTA040-F GGGTGCAGTTTTTCTCTGCT

Matches = 12

Score = 7

ANCAGAGNAANACTGNN

est. tm = 8.3 oC

DeltaG @37 degrees = -3.15 kcal/mole

3'-TCGTCTCTTTTTGACGTGGG-5'

|x|||||x||x||||xx

5'-GCAACAGAGCAAGACTGTC-3'

TTTA040-F GGGTGCAGTTTTTCTCTGCT versus ATA18A07-R TATATGAAGTGCTTAGAAAAAGTGC

Matches = 12

Score = 8

GCANTTTTTCTNNGCN

est. tm = 23.2 oC

DeltaG @37 degrees = -5.91 kcal/mole

3'-CGTGAAAAAGATTCGTGAAGTATAT-5'

|||x|||||||xx||x

5'-GGGTGCAGTTTTTCTCTGCT-3'

ATA50C05-R GCATAATGCACATGCCTGTA versus ATA22E01-F GTACATTCTGCACACGTACCC

Matches = 9

Score = 7

GTNCATTNTGC

est. tm = less than 0 oC

DeltaG @37 degrees = -2.66 kcal/mole

5'-GTACATTCTGCACACGTACCC-3'

||x||||x|||

3'-ATGTCCGTACACGTAATACG-5'

GATA22G12-F AAAGCTAGAAGGAGCTGGCT versus 4PTEL04-F CTAGCTTTGATTCTATTGACC

Matches = 8

Score = 8

CTAGCTTT

est. tm = 11.1 oC

DeltaG @37 degrees = -4.47 kcal/mole

5'-CTAGCTTTGATTCTATTGACC-3'

||||||||

3'-TCGGTCGAGGAAGATCGAAA-5'

GGAA2A03-F CCTGGGCAACAGAATAAGAT versus 4PTEL04-F CTAGCTTTGATTCTATTGACC

Matches = 12

Score = 7

GGNCAANAGAATNANAN

est. tm = less than zero

DeltaG @37 degrees = -1.44 kcal/mole

3'-CCAGTTATCTTAGTTTCGATC-5'

||x|||x|||||x|x|x

5'-CCTGGGCAACAGAATAAGAT-3'

ATT015-F AGCACCCATATTTGCAGGAA versus GATA50D10-F ATGCCTACAAAAACCAGTGC

Matches = 13

Score = 7

GCACNNNTNTTTGNAGGNA

est. tm = 4.1 oC

DeltaG @37 degrees = -2.01 kcal/mole

3'-CGTGACCAAAAACATCCGTA-5'

||||xxx|x||||x|||x|

5'-AGCACCCATATTTGCAGGAA-3'

ATT015-F AGCACCCATATTTGCAGGAA versus GATA86H01-F GGTGCTTGCTGTAAATATAATTG

Matches = 13

Score = 8

CANNNATATTTNCAGNAA

est. tm = 0.2 oC

DeltaG @37 degrees = -0.53 kcal/mole

3'-GTTAATATAAATGTCGTTCGTGG-5'

||xxx||||||x|||x||

5'-AGCACCCATATTTGCAGGAA-3'

ATT015-F AGCACCCATATTTGCAGGAA versus TATC043-F GCCATCCTCCTGCAAATAAG

Matches = 12

Score = 10

CNTATTTGCAGGAN

est. tm = 31.0 oC

DeltaG @37 degrees = -7.77 kcal/mole

3'-GAATAAACGTCCTCCTACCG-5'

|x|||||||||||x

5'-AGCACCCATATTTGCAGGAA-3'

UT1772-R GGGTGCTAGGTGTGCTCA versus ATT015-F AGCACCCATATTTGCAGGAA

Matches = 7

Score = 7

AGCACCC

est. tm = 17.4 oC

DeltaG @37 degrees = -6.12 kcal/mole

5'-AGCACCCATATTTGCAGGAA-3'

|||||||

3'-ACTCGTGTGGATCGTGGG-5'

ATA27C07-F CATGCACACCAAAACAAGAA versus GATA22D12-R TTTGATGAGCTTGAACTAGGG

Matches = 10

Score = 7

TTTGNTGNGCNTG

est. tm = less than 0 oC

DeltaG @37 degrees = -1.79 kcal/mole

5'-TTTGATGAGCTTGAACTAGGG-3'

||||x||x||x||

3'-AAGAACAAAACCACACGTAC-5'

GATA61E03-R GGTATTTTTTGCCCACATGA versus ATA21F01-F GGTTTAAAAATACATCATGTGGC

Matches = 8

Score = 7

NCCACATGA

est. tm = 18.4 oC

DeltaG @37 degrees = -5.89 kcal/mole

3'-CGGTGTACTACATAAAAATTTGG-5'

x||||||||

5'-GGTATTTTTTGCCCACATGA-3'

GATA189C06-R GGAAGCCAAATGTTGAATTG versus ATA21F01-F GGTTTAAAAATACATCATGTGGC

Matches = 12

Score = 8

GCCANATGNTGNATTN

est. tm = 15.3 oC

DeltaG @37 degrees = -4.53 kcal/mole

3'-CGGTGTACTACATAAAAATTTGG-5'

||||x|||x||x|||x

5'-GGAAGCCAAATGTTGAATTG-3'

ATA21F01-F GGTTTAAAAATACATCATGTGGC versus ATA27D04N-F TAACTATGTCATCTAGCCAAATGA

Matches = 8

Score = 7

TCATNTGGC

est. tm = 6.7 oC

DeltaG @37 degrees = -4.24 kcal/mole

3'-AGTAAACCGATCTACTGTATCAAT-5'

||||x||||

5'-GGTTTAAAAATACATCATGTGGC-3'

GATA64H04-F GATGATAGAGATGGCACATGA versus ATA21F01-F GGTTTAAAAATACATCATGTGGC

Matches = 8

Score = 7

GNCACATGA

est. tm = 0.1 oC

DeltaG @37 degrees = -3.09 kcal/mole

3'-CGGTGTACTACATAAAAATTTGG-5'

|x|||||||

5'-GATGATAGAGATGGCACATGA-3'

ATA7D07-F ATCCCACAGGATGCCTATTT versus ATA21F01-F GGTTTAAAAATACATCATGTGGC

Matches = 13

Score = 8

NCCACANGATGNNTNTTT

est. tm = 13.7 oC

DeltaG @37 degrees = -3.78 kcal/mole

3'-CGGTGTACTACATAAAAATTTGG-5'

x|||||x||||xx|x|||

5'-ATCCCACAGGATGCCTATTT-3'

GATA24H01N-F CAGGGAGACAGAACCAACTG versus GATA73E11-F TTGGTGGTGTCATCCTCTTT

Matches = 12

Score = 7

TTGGTNNTGTCNNCCTN

est. tm = 21.5 oC

DeltaG @37 degrees = -5.69 kcal/mole

5'-TTGGTGGTGTCATCCTCTTT-3'

|||||xx||||xx|||x

3'-GTCAACCAAGACAGAGGGAC-5'

GATA24H01N-F CAGGGAGACAGAACCAACTG versus GATA151F03N-F CTGGACAGTCAGTTGGAGCT

Matches = 9

Score = 7

AGNNCCAACTG

est. tm = 8.3 oC

DeltaG @37 degrees = -3.90 kcal/mole

3'-TCGAGGTTGACTGACAGGTC-5'

||xx|||||||

5'-CAGGGAGACAGAACCAACTG-3'

ATA2A03-F CCACGTGACTTTCATTAGGG versus GATA88H02N-F TGAGTTTTTCCTATTGAGAGTCC

Matches = 11

Score = 7

NGACTNTCANTAGGN

est. tm = 17.4 oC

DeltaG @37 degrees = -5.12 kcal/mole

3'-CCTGAGAGTTATCCTTTTTGAGT-5'

x||||x|||x||||x

5'-CCACGTGACTTTCATTAGGG-3'

ATA2A03-F CCACGTGACTTTCATTAGGG versus ATA21F01-R ATGACCAAAATGAAAATCACTG

Matches = 13

Score = 8

NNGTGANTTTCATTNNGG

est. tm = 19.7 oC

DeltaG @37 degrees = -4.71 kcal/mole

3'-GTCACTAAAAGTAAAACCAGTA-5'

xx||||x|||||||xx||

5'-CCACGTGACTTTCATTAGGG-3'

ATA2A03-F CCACGTGACTTTCATTAGGG versus ATA79C10-F GCCTTCATGGAGGTTACATG

Matches = 13

Score = 7

CANGTNACNTNCATNANGG

est. tm = less than zero

DeltaG @37 degrees = greater than zero

3'-GTACATTGGAGGTACTTCCG-5'

||x||x||x|x|||x|x||

5'-CCACGTGACTTTCATTAGGG-3'

ATA2A03-F CCACGTGACTTTCATTAGGG versus GATA6B09-F TTGCATCCATACGGAAAGTC

Matches = 11

Score = 8

GACTTTCNNTANGG

est. tm = 7.1 oC

DeltaG @37 degrees = -2.74 kcal/mole

3'-CTGAAAGGCATACCTACGTT-5'

|||||||xx||x||

5'-CCACGTGACTTTCATTAGGG-3'

ATA2A03-F CCACGTGACTTTCATTAGGG versus GGAA20C10-R TTCCTGTCCTCTAATGTAACTTACC

Matches = 12

Score = 7

NGTNANTTNCATTAGNG

est. tm = less than zero

DeltaG @37 degrees = greater than zero

3'-CCATTCAATGTAATCTCCTGTCCTT-5'

x||x|x||x||||||x|

5'-CCACGTGACTTTCATTAGGG-3'

ATA2A03-F CCACGTGACTTTCATTAGGG versus GATA188F04-R TACAGTAAATCACTTGGTAGGAGA

Matches = 12

Score = 7

TANNGNAANTCACNTGG

est. tm = less than 0 oC

DeltaG @37 degrees = -0.34 kcal/mole

5'-TACAGTAAATCACTTGGTAGGAGA-3'

||xx|x||x||||x|||

3'-GGGATTACTTTCAGTGCACC-5'

GATA62A12-F AACTAGGCTGCTTCCCAGAT versus GATA41A01-F GTGTTGACCAACTGGGTAGC

Matches = 9

Score = 7

GCTNCCCAGNT

est. tm = 5.2 oC

DeltaG @37 degrees = -4.03 kcal/mole

3'-CGATGGGTCAACCAGTTGTG-5'

|||x|||||x|

5'-AACTAGGCTGCTTCCCAGAT-3'

GATA62A12-F AACTAGGCTGCTTCCCAGAT versus GGAA3C07-F ATGTACATGTGTCTGGGAAGG

Matches = 9

Score = 7

NCTTCCCAGAN

est. tm = 29.8 oC

DeltaG @37 degrees = -7.84 kcal/mole

3'-GGAAGGGTCTGTGTACATGTA-5'

x|||||||||x

5'-AACTAGGCTGCTTCCCAGAT-3'

GATA107-F GACTCCAAATCACATGAGCC versus GATA175D03-F TGGAGTCTCTGGGTGAAGAG

Matches = 7

Score = 7

TGGAGTC

est. tm = 8.8 oC

DeltaG @37 degrees = -4.69 kcal/mole

5'-TGGAGTCTCTGGGTGAAGAG-3'

|||||||

3'-CCGAGTACACTAAACCTCAG-5'

GATA107-F GACTCCAAATCACATGAGCC versus GATA163B10N-R TGGAGACAGCATGTGATTTG

Matches = 11

Score = 7

CAAATCACATGNNNN

est. tm = 24.4 oC

DeltaG @37 degrees = -5.99 kcal/mole

3'-GTTTAGTGTACGACAGAGGT-5'

|||||||||||xxxx

5'-GACTCCAAATCACATGAGCC-3'

GATA107-F GACTCCAAATCACATGAGCC versus GGAA8G07-R CCCTGGACTCATGGTACTTG

Matches = 11

Score = 7

CAANTNNCATGAGNC

est. tm = less than zero

DeltaG @37 degrees = -1.11 kcal/mole

3'-GTTCATGGTACTCAGGTCCC-5'

|||x|xx||||||x|

5'-GACTCCAAATCACATGAGCC-3'

GATA27G03-F GAGCCAGACCTTGTCTCAAA versus ATA29G03Z-R ATTTGGAATAAGGCCTGACT

Matches = 14

Score = 9

AGNCAGNCCTTNTNNCAAA

est. tm = 6.6 oC

DeltaG @37 degrees = -2.25 kcal/mole

3'-TCAGTCCGGAATAAGGTTTA-5'

||x|||x||||x|xx||||

5'-GAGCCAGACCTTGTCTCAAA-3'

GATA12F04-F AGCCATCTGGGCTTAGAGAT versus GATA42H02-F AGCACAAGATTCTCTAAGCCC

Matches = 11

Score = 10

GGGCTTAGAGAN

est. tm = 38.1 oC

DeltaG @37 degrees = -9.64 kcal/mole

3'-CCCGAATCTCTTAGAACACGA-5'

|||||||||||x

5'-AGCCATCTGGGCTTAGAGAT-3'

GATA87E02N-F GTTGTTGCTGGGCTTAGAAA versus GATA42H02-F AGCACAAGATTCTCTAAGCCC

Matches = 10

Score = 9

GGGCTTAGANA

est. tm = 20.5 oC

DeltaG @37 degrees = -5.89 kcal/mole

3'-CCCGAATCTCTTAGAACACGA-5'

|||||||||x|

5'-GTTGTTGCTGGGCTTAGAAA-3'

GATA42H02-F AGCACAAGATTCTCTAAGCCC versus GGAT1A4-R ATAGTTTTGTGCTTATTGACATGA

Matches = 10

Score = 7

ANANTNTTGTGCT

est. tm = less than 0 oC

DeltaG @37 degrees = -1.99 kcal/mole

5'-ATAGTTTTGTGCTTATTGACATGA-3'

|x|x|x|||||||

3'-CCCGAATCTCTTAGAACACGA-5'

GATA4G12-R GCCATCTGTACTGTTCCCAG versus GATA5B02-F AATCCCTGGGTACATTATATTTG

Matches = 13

Score = 8

CANNTNTANTGTNCCCAG

est. tm = 5.8 oC

DeltaG @37 degrees = -2.37 kcal/mole

3'-GTTTATATTACATGGGTCCCTAA-5'

||xx|x||x|||x|||||

5'-GCCATCTGTACTGTTCCCAG-3'

GATA5B02-F AATCCCTGGGTACATTATATTTG versus GGAA20C10-R TTCCTGTCCTCTAATGTAACTTACC

Matches = 11

Score = 7

GGTANNTTANATTNG

est. tm = less than zero

DeltaG @37 degrees = greater than zero

3'-CCATTCAATGTAATCTCCTGTCCTT-5'

||||xx|||x|||x|

5'-AATCCCTGGGTACATTATATTTG-3'

GATA145D10N-F CCTGGAAGAACCAATGCTTA versus GATA6A05-R TTGTAATTCTTGGTCCTGCC

Matches = 12

Score = 7

GGNAGNACCAANNNTTA

est. tm = 1.5 oC

DeltaG @37 degrees = -1.70 kcal/mole

3'-CCGTCCTGGTTCTTAATGTT-5'

||x||x|||||xxx|||

5'-CCTGGAAGAACCAATGCTTA-3'

GATA145D10N-F CCTGGAAGAACCAATGCTTA versus GATA6G12-R GAAGACCTACGGATTGGGTC

Matches = 10

Score = 7

GANCCAATNCNTA

est. tm = less than zero

DeltaG @37 degrees = -0.23 kcal/mole

3'-CTGGGTTAGGCATCCAGAAG-5'

||x|||||x|x||

5'-CCTGGAAGAACCAATGCTTA-3'

GATA145D10N-F CCTGGAAGAACCAATGCTTA versus GATA6E05-R GTTCTTCAGGGAAACAGAACC

Matches = 9

Score = 7

GTTCTTCNNGG

est. tm = 6.8 oC

DeltaG @37 degrees = -3.39 kcal/mole

5'-GTTCTTCAGGGAAACAGAACC-3'

|||||||xx||

3'-ATTCGTAACCAAGAAGGTCC-5'

GATA90D07N-R CCCGGCCTTGATTTATTTAA versus GATA3E10-F TGTAAACTTCATGAAGGCAGG

Matches = 13

Score = 7

CCNGCCTTNATNNANTTNA

est. tm = less than zero

DeltaG @37 degrees = -0.33 kcal/mole

3'-GGACGGAAGTACTTCAAATGT-5'

||x|||||x||xx|x||x|

5'-CCCGGCCTTGATTTATTTAA-3'

GATA3E10-F TGTAAACTTCATGAAGGCAGG versus GATA50C03N-R CAAGTTTACAGTGAACTGTGGTCA

Matches = 9

Score = 8

NAAGTTTACA

est. tm = 16.6 oC

DeltaG @37 degrees = -5.05 kcal/mole

5'-CAAGTTTACAGTGAACTGTGGTCA-3'

x|||||||||

3'-GGACGGAAGTACTTCAAATGT-5'

ATA79C10-F GCCTTCATGGAGGTTACATG versus GATA3E10-F TGTAAACTTCATGAAGGCAGG

Matches = 16

Score = 14

TGTAANCTNCATGAAGGC

est. tm = 37.1 oC

DeltaG @37 degrees = -9.42 kcal/mole

5'-TGTAAACTTCATGAAGGCAGG-3'

|||||x||x|||||||||

3'-GTACATTGGAGGTACTTCCG-5'

UT6540-F TTCCTCTGGCTTCTAGAAG versus GATA3E10-F TGTAAACTTCATGAAGGCAGG

Matches = 11

Score = 7

NCTGNCTTCNNGAAG

est. tm = 9.1 oC

DeltaG @37 degrees = -3.19 kcal/mole

3'-GGACGGAAGTACTTCAAATGT-5'

x|||x||||xx||||

5'-TTCCTCTGGCTTCTAGAAG-3'

GATA67D03-F TTAAAGGAGTGATCTCCCCC versus Mfd232-F AGAGTGAGATTCCACCTTTC

Matches = 13

Score = 7

NAAAGGNGNNATCTCNCNC

est. tm = 0.2 oC

DeltaG @37 degrees = -1.22 kcal/mole

3'-CTTTCCACCTTAGAGTGAGA-5'

x|||||x|xx|||||x|x|

5'-TTAAAGGAGTGATCTCCCCC-3'

GATA52A12-F TTATAGAGCAGCCTTCCCTG versus GGAA3C07-F ATGTACATGTGTCTGGGAAGG

Matches = 8

Score = 7

CCTTCCCNG

est. tm = 6.6 oC

DeltaG @37 degrees = -4.23 kcal/mole

3'-GGAAGGGTCTGTGTACATGTA-5'

|||||||x|

5'-TTATAGAGCAGCCTTCCCTG-3'

GATA3H06-F CTTTCCCTCTCTTCCCACAT versus GATA43A04-F GGAAAGCCTGTAGGAAGAGG

Matches = 10

Score = 7

NCTCTTCCNACAN

est. tm = 23.7 oC

DeltaG @37 degrees = -6.50 kcal/mole

3'-GGAGAAGGATGTCCGAAAGG-5'

x|||||||x|||x

5'-CTTTCCCTCTCTTCCCACAT-3'

GATA3H06-F CTTTCCCTCTCTTCCCACAT versus GATA49D12N-R AGATAGAGGGAAAGGCATATGTG

Matches = 11

Score = 8

NNANAGAGGGAAAG

est. tm = 23.1 oC

DeltaG @37 degrees = -6.07 kcal/mole

5'-AGATAGAGGGAAAGGCATATGTG-3'

xx|x||||||||||

3'-TACACCCTTCTCTCCCTTTC-5'

GATA62A04-F TAAGTGCCAGAGTCTCCCAC versus GATA62A04-F TAAGTGCCAGAGTCTCCCAC

Matches = 12

Score = 7

GTGNNAGANTCTNNCAC

est. tm = 6.0 oC

DeltaG @37 degrees = -2.31 kcal/mole

3'-CACCCTCTGAGACCGTGAAT-5'

|||xx|||x|||xx|||

5'-TAAGTGCCAGAGTCTCCCAC-3'

GATA62A04-F TAAGTGCCAGAGTCTCCCAC versus AGAT125-R TGGCAAAGTCAGGCCATTAT

Matches = 13

Score = 7

TGGNANANTCNGGCNNTTA

est. tm = less than 0 oC

DeltaG @37 degrees = -0.47 kcal/mole

5'-TGGCAAAGTCAGGCCATTAT-3'

|||x|x|x||x|||xx|||

3'-CACCCTCTGAGACCGTGAAT-5'

ATA23A10-F TTGGGAAGAATAGCTTTCCC versus GATA62F03N-F TTCCCAAAAGTTGCCATCTA

Matches = 7

Score = 7

TTCCCAA

est. tm = 5.7 oC

DeltaG @37 degrees = -4.43 kcal/mole

5'-TTCCCAAAAGTTGCCATCTA-3'

|||||||

3'-CCCTTTCGATAAGAAGGGTT-5'

GATA11A11-F TATCGAATTGTAACCCCGTT versus GATA168F06-F ACAATTCCAGAAACTTCCCC

Matches = 9

Score = 7

ACAATTCNANA

est. tm = less than 0 oC

DeltaG @37 degrees = -1.18 kcal/mole

5'-ACAATTCCAGAAACTTCCCC-3'

|||||||x|x|

3'-TTGCCCCAATGTTAAGCTAT-5'

AAAT072-F GGCAGCAAGAGTGAAACTCA versus GATA8B01-R ATGGATAAATTGAGTTTCCCC

Matches = 9

Score = 7

NGNGAAACTCA

est. tm = 8.5 oC

DeltaG @37 degrees = -3.93 kcal/mole

3'-CCCCTTTGAGTTAAATAGGTA-5'

x|x||||||||

5'-GGCAGCAAGAGTGAAACTCA-3'

AAAT072-F GGCAGCAAGAGTGAAACTCA versus ATA4E02-R CTGCTTTGGGTTTCACTTGT

Matches = 11

Score = 8

ANNAGTGAAACNCA

est. tm = 8.3 oC

DeltaG @37 degrees = -3.26 kcal/mole

3'-TGTTCACTTTGGGTTTCGTC-5'

|xx||||||||x||

5'-GGCAGCAAGAGTGAAACTCA-3'

AAAT072-F GGCAGCAAGAGTGAAACTCA versus GATA22F11NZ-R TCTCTCTTGCTCCACTGCAA

Matches = 11

Score = 8

TCNCTCTTGCTNCN

est. tm = 18.7 oC

DeltaG @37 degrees = -5.43 kcal/mole

5'-TCTCTCTTGCTCCACTGCAA-3'

||x||||||||x|x

3'-ACTCAAAGTGAGAACGACGG-5'

AAAT072-F GGCAGCAAGAGTGAAACTCA versus GATA165B12-R TTAAAATCATTTTCACTGTGTATGC

Matches = 13

Score = 7

GCANNNANAGTGAAANTNA

est. tm = 2.1 oC

DeltaG @37 degrees = -1.49 kcal/mole

3'-CGTATGTGTCACTTTTACTAAAATT-5'

|||xxx|x|||||||x|x|

5'-GGCAGCAAGAGTGAAACTCA-3'

GATA6G12-R GAAGACCTACGGATTGGGTC versus TTA032Z-F GGTCTTCCTTGTGGTTTTTCA

Matches = 7

Score = 7

GGTCTTC

est. tm = 7.6 oC

DeltaG @37 degrees = -4.31 kcal/mole

5'-GGTCTTCCTTGTGGTTTTTCA-3'

|||||||

3'-CTGGGTTAGGCATCCAGAAG-5'

GATA42H02-R AAAGCCAAAAGATGATGCAA versus ATA50C05-F TTTGGAAAGAATCTGTATTATCTTT

Matches = 10

Score = 7

AAAGATNATNCAN

est. tm = less than zero

DeltaG @37 degrees = -2.35 kcal/mole

3'-TTTCTATTATGTCTAAGAAAGGTTT-5'

||||||x||x||x

5'-AAAGCCAAAAGATGATGCAA-3'

ATA50C05-F TTTGGAAAGAATCTGTATTATCTTT versus GGAA9D03-R TTCTTTCCTTACTAAGTTGAGAACG

Matches = 9

Score = 7

TTCTTTCCNNA

est. tm = 1.5 oC

DeltaG @37 degrees = -2.84 kcal/mole

5'-TTCTTTCCTTACTAAGTTGAGAACG-3'

||||||||xx|

3'-TTTCTATTATGTCTAAGAAAGGTTT-5'

ATA50C05-F TTTGGAAAGAATCTGTATTATCTTT versus GATA131D09-F AAAAATCTGACTCTATTCAAATGTT

Matches = 14

Score = 7

ANAANNCNGANTCTNTNCAAA

est. tm = less than 0 oC

DeltaG @37 degrees = > 0 kcal/mole

5'-AAAAATCTGACTCTATTCAAATGTT-3'

|x||xx|x||x|||x|x||||

3'-TTTCTATTATGTCTAAGAAAGGTTT-5'

GATA21D04-R TGCTTGGCACACTTCAGG versus GATA163B10N-F CATTTCAAACCCCTGAAGTG

Matches = 9

Score = 9

CACTTCAGG

est. tm = 24.5 oC

DeltaG @37 degrees = -6.63 kcal/mole

3'-GTGAAGTCCCCAAACTTTAC-5'

|||||||||

5'-TGCTTGGCACACTTCAGG-3'

GATA163B10N-F CATTTCAAACCCCTGAAGTG versus GATA68A03-R TTGAAATGGGCACAGAAATT

Matches = 8

Score = 8

TTGAAATG

est. tm = 8.4 oC

DeltaG @37 degrees = -3.90 kcal/mole

5'-TTGAAATGGGCACAGAAATT-3'

||||||||

3'-GTGAAGTCCCCAAACTTTAC-5'

GATA163B10N-F CATTTCAAACCCCTGAAGTG versus ATA33B03Z-R TAGTATCCACTTCCTGGGGT

Matches = 10

Score = 7

ANCCCNNGAAGTG

est. tm = 5.4 oC

DeltaG @37 degrees = -3.33 kcal/mole

3'-TGGGGTCCTTCACCTATGAT-5'

|x|||xx||||||

5'-CATTTCAAACCCCTGAAGTG-3'

GATA6C01-R TGGCACTAGATGTTTTCAAGG versus GATA11E02N-F TTGCCTTGTTAACATGTACAGG

Matches = 13

Score = 7

NCNNTANATGTTNNCAAGG

est. tm = 8.0 oC

DeltaG @37 degrees = -2.27 kcal/mole

3'-GGACATGTACAATTGTTCCGTT-5'

x|xx||x|||||xx|||||

5'-TGGCACTAGATGTTTTCAAGG-3'

ATA28B11-F CCTGATGGTCATGTGTCTGA versus GATA63A03N-F GTGGATAGACACATGACAGATAGG

Matches = 14

Score = 8

CCTNNNNGTCATGTGTCTNN

est. tm = 32.8 oC

DeltaG @37 degrees = -8.05 kcal/mole

3'-GGATAGACAGTACACAGATAGGTG-5'

|||xxxx|||||||||||xx

5'-CCTGATGGTCATGTGTCTGA-3'

ATA11D10-F TTGGAAGACATTTGCAGTCA versus GATA87E02N-R TTGATTGACTGCACTTTTCA

Matches = 11

Score = 7

NGANANNTGCAGTCA

est. tm = 17.7 oC

DeltaG @37 degrees = -5.13 kcal/mole

3'-ACTTTTCACGTCAGTTAGTT-5'

x||x|xx||||||||

5'-TTGGAAGACATTTGCAGTCA-3'

GATA23F08-F GAATGCAGGACTGTTTCTGG versus GATA81D12-R TAATGTACCTGGTACCAAAAACA

Matches = 8

Score = 7

TGTTTNTGG

est. tm = 1.1 oC

DeltaG @37 degrees = -3.30 kcal/mole

3'-ACAAAAACCATGGTCCATGTAAT-5'

|||||x|||

5'-GAATGCAGGACTGTTTCTGG-3'

GATA23F08-F GAATGCAGGACTGTTTCTGG versus SDF1-F GGCCTGAATTCATTTATTATTATTCTAATA

Matches = 9

Score = 7

GNCCTGNATTC

est. tm = less than 0 oC

DeltaG @37 degrees = -1.94 kcal/mole

5'-GGCCTGAATTCATTTATTATTATTCTAATA-3'

|x||||x||||

3'-GGTCTTTGTCAGGACGTAAG-5'

ATA6C09-F ACTTGAATCCAGGCATTCAG versus ATCT003-R AGGATGCCACTAAATGCCTA

Matches = 9

Score = 7

NAGGCATTNAG

est. tm = 15.2 oC

DeltaG @37 degrees = -5.12 kcal/mole

3'-ATCCGTAAATCACCGTAGGA-5'

x|||||||x||

5'-ACTTGAATCCAGGCATTCAG-3'

ATA6C09-F ACTTGAATCCAGGCATTCAG versus GATA43C11-F TTCAAGTGGTTGGGTTCACT

Matches = 7

Score = 7

TTCAAGT

est. tm = 0.7 oC

DeltaG @37 degrees = -3.52 kcal/mole

5'-TTCAAGTGGTTGGGTTCACT-3'

|||||||

3'-GACTTACGGACCTAAGTTCA-5'

ATA6C09-F ACTTGAATCCAGGCATTCAG versus SDF1-F GGCCTGAATTCATTTATTATTATTCTAATA

Matches = 11

Score = 7

NGCCTGNATTCANNT

est. tm = 14.9 oC

DeltaG @37 degrees = -4.62 kcal/mole

5'-GGCCTGAATTCATTTATTATTATTCTAATA-3'

x|||||x|||||xx|

3'-GACTTACGGACCTAAGTTCA-5'

ATA6C09-F ACTTGAATCCAGGCATTCAG versus GATA172D05-R ATAATTGAAAGCCCGGATTC

Matches = 13

Score = 10

GAATCCNGGCNTTCAN

est. tm = 31.6 oC

DeltaG @37 degrees = -7.92 kcal/mole

3'-CTTAGGCCCGAAAGTTAATA-5'

||||||x|||x||||x

5'-ACTTGAATCCAGGCATTCAG-3'

ATA22G07-F CGTTCTGCACATGTATCCTG versus ATA79C10-F GCCTTCATGGAGGTTACATG

Matches = 9

Score = 7

CATGTANCCTN

est. tm = 11.8 oC

DeltaG @37 degrees = -4.49 kcal/mole

3'-GTACATTGGAGGTACTTCCG-5'

||||||x|||x

5'-CGTTCTGCACATGTATCCTG-3'

ATA22G07-F CGTTCTGCACATGTATCCTG versus GGAA2F11N-F AAGATACACAGGAAGAAAGAAAGG

Matches = 13

Score = 7

ANGATACANNNGNAGAANG

est. tm = less than 0 oC

DeltaG @37 degrees = > 0 kcal/mole

5'-AAGATACACAGGAAGAAAGAAAGG-3'

|x||||||xxx|x||||x|

3'-GTCCTATGTACACGTCTTGC-5'

UT254-F TCTCAGTGAAGGTAGACAGGA versus AFMb035xb9-F AACCTCAAGTCTACATTCATAGCGG

Matches = 14

Score = 7

NCNCNNTGAANGTAGACNNGA

est. tm = 4.6 oC

DeltaG @37 degrees = -1.47 kcal/mole

3'-GGCGATACTTACATCTGAACTCCAA-5'

x|x|xx||||x||||||xx||

5'-TCTCAGTGAAGGTAGACAGGA-3'

GATA26G09N-R ACATGAGCTGGTTCCCCTATGA versus AFMb035xb9-F AACCTCAAGTCTACATTCATAGCGG

Matches = 8

Score = 7

CCNCTATGA

est. tm = less than zero

DeltaG @37 degrees = -2.43 kcal/mole

3'-GGCGATACTTACATCTGAACTCCAA-5'

||x||||||

5'-ACATGAGCTGGTTCCCCTATGA-3'

GGAA4A12-R CGAATGCATACTTGCTGTTG versus AFMb035xb9-F AACCTCAAGTCTACATTCATAGCGG

Matches = 14

Score = 9

AACNNCAAGTNTNCATTCN

est. tm = 18.0 oC

DeltaG @37 degrees = -4.37 kcal/mole

5'-AACCTCAAGTCTACATTCATAGCGG-3'

|||xx|||||x|x|||||x

3'-GTTGTCGTTCATACGTAAGC-5'

AAT034-F CCCATCTATGAATGCACACG versus AFMb035xb9-F AACCTCAAGTCTACATTCATAGCGG

Matches = 13

Score = 8

CNNCTATGAATGNANACN

est. tm = 9.7 oC

DeltaG @37 degrees = -2.69 kcal/mole

3'-GGCGATACTTACATCTGAACTCCAA-5'

|xx|||||||||x|x||x

5'-CCCATCTATGAATGCACACG-3'

GATA3C02-R CTGGCCCCATCTCTCTCTAT versus GATA119B03-F ACCCCTGAGATGATAGATAGACA

Matches = 9

Score = 7

TNTCTNTCTAT

est. tm = less than zero

DeltaG @37 degrees = -0.72 kcal/mole

3'-ACAGATAGATAGTAGAGTCCCCA-5'

|x|||x|||||

5'-CTGGCCCCATCTCTCTCTAT-3'

GATA119B03-F ACCCCTGAGATGATAGATAGACA versus GATA188F04-F AACAGAACCAATAGGCTATCTATC

Matches = 10

Score = 8

GATAGATAGNCN

est. tm = 9.0 oC

DeltaG @37 degrees = -3.39 kcal/mole

3'-CTATCTATCGGATAACCAAGACAA-5'

|||||||||x|x

5'-ACCCCTGAGATGATAGATAGACA-3'

GATA119B03-F ACCCCTGAGATGATAGATAGACA versus GATA22G05-R AAAACAAATATGGCTCTATCTATCG

Matches = 10

Score = 7

NGATAGATAGANN

est. tm = 18.3 oC

DeltaG @37 degrees = -4.99 kcal/mole

3'-GCTATCTATCTCGGTATAAACAAAA-5'

x||||||||||xx

5'-ACCCCTGAGATGATAGATAGACA-3'

GATA21F03-R CCTGCCTGCCTATCTATCTG versus GATA119B03-F ACCCCTGAGATGATAGATAGACA

Matches = 11

Score = 8

TGNCTATCTATCNN

est. tm = 13.1 oC

DeltaG @37 degrees = -3.83 kcal/mole

3'-ACAGATAGATAGTAGAGTCCCCA-5'

||x|||||||||xx

5'-CCTGCCTGCCTATCTATCTG-3'

GATA41G07-F AAGCAATGCAGTGATCCATT versus GGAA23C05N-F GGAATAAGTGCAGTGCTTGG

Matches = 13

Score = 8

NGNATNANTGCANTGCTT

est. tm = 12.6 oC

DeltaG @37 degrees = -3.93 kcal/mole

5'-GGAATAAGTGCAGTGCTTGG-3'

x|x||x|x||||x|||||

3'-TTACCTAGTGACGTAACGAA-5'

GATA41G07-F AAGCAATGCAGTGATCCATT versus GATA50C03N-F GGATGATCACAATGCTTATGG

Matches = 12

Score = 7

GGATNANNNCANTGCTT

est. tm = 6.6 oC

DeltaG @37 degrees = -2.69 kcal/mole

5'-GGATGATCACAATGCTTATGG-3'

||||x|xxx||x|||||

3'-TTACCTAGTGACGTAACGAA-5'

GATA41G07-F AAGCAATGCAGTGATCCATT versus ATA23G05-R TGCATTGCATGAAAGTAGGA

Matches = 9

Score = 8

TGCATTGCNT

est. tm = 16.5 oC

DeltaG @37 degrees = -5.46 kcal/mole

5'-TGCATTGCATGAAAGTAGGA-3'

||||||||x|

3'-TTACCTAGTGACGTAACGAA-5'

GATA41G07-F AAGCAATGCAGTGATCCATT versus GATA68F07-F ATTGCTTCCCCTTTACCTGA

Matches = 7

Score = 7

ATTGCTT

est. tm = 2.8 oC

DeltaG @37 degrees = -3.85 kcal/mole

5'-ATTGCTTCCCCTTTACCTGA-3'

|||||||

3'-TTACCTAGTGACGTAACGAA-5'

GATA13G11-F TTGGGACCTCTTATTTTCCA versus GATA73D10N-F TCATGACAAAACAGAAAATAAGTG

Matches = 10

Score = 7

CNCTTATTTTCNN

est. tm = 6.5 oC

DeltaG @37 degrees = -2.70 kcal/mole

3'-GTGAATAAAAGACAAAACAGTACT-5'

|x|||||||||xx

5'-TTGGGACCTCTTATTTTCCA-3'

GATA13G11-F TTGGGACCTCTTATTTTCCA versus GATA169E06-F ACAGTTCCCAAGACTAAACAGC

Matches = 9

Score = 7

ANAGNTCCCAA

est. tm = less than 0 oC

DeltaG @37 degrees = -2.78 kcal/mole

5'-ACAGTTCCCAAGACTAAACAGC-3'

|x||x||||||

3'-ACCTTTTATTCTCCAGGGTT-5'

GATA70B08-R GTCCCAAAGGACCTGCTC versus GATA13G11-F TTGGGACCTCTTATTTTCCA

Matches = 7

Score = 7

TTGGGAC

est. tm = 10.0 oC

DeltaG @37 degrees = -4.93 kcal/mole

5'-TTGGGACCTCTTATTTTCCA-3'

|||||||

3'-CTCGTCCAGGAAACCCTG-5'

GATA24D12-F CCCTAACTCCCATGTTGATG versus UT5029-R AAATCATCAGTGGAGTTAGCA

Matches = 14

Score = 8

NNCTAACTCCNNTGNTGATN

est. tm = 26.1 oC

DeltaG @37 degrees = -6.26 kcal/mole

3'-ACGATTGAGGTGACTACTAAA-5'

xx||||||||xx||x||||x

5'-CCCTAACTCCCATGTTGATG-3'

GATA24D12-F CCCTAACTCCCATGTTGATG versus GGAA20C10-F AGCAAACTTCATCCACTTGG

Matches = 9

Score = 7

CCANGTNGATG

est. tm = less than zero

DeltaG @37 degrees = -2.56 kcal/mole

3'-GGTTCACCTACTTCAAACGA-5'

|||x||x||||

5'-CCCTAACTCCCATGTTGATG-3'

GATA73D10N-F TCATGACAAAACAGAAAATAAGTG versus AAT243-R TCACCCATTAATTCTTTGATTTGA

Matches = 13

Score = 7

NCAAANCANANAATNANTG

est. tm = less than zero

DeltaG @37 degrees = greater than zero

3'-AGTTTAGTTTCTTAATTACCCACT-5'

x||||x||x|x|||x|x||

5'-TCATGACAAAACAGAAAATAAGTG-3'

GATA5D08-F ACAAAACCCCAAGTACGTGA versus GATA32F05-F ATTTCACGTACTTGGCAAGC

Matches = 12

Score = 7

NNNNNCCAAGTACGTGA

est. tm = 31.1 oC

DeltaG @37 degrees = -7.67 kcal/mole

3'-CGAACGGTTCATGCACTTTA-5'

xxxxx||||||||||||

5'-ACAAAACCCCAAGTACGTGA-3'

GATA5D08-F ACAAAACCCCAAGTACGTGA versus GGAA22G01-R TCGTTGAGATTTTGTGCTATG

Matches = 11

Score = 7

TNNTTGNGNTTTTGT

est. tm = less than 0 oC

DeltaG @37 degrees = -0.55 kcal/mole

5'-TCGTTGAGATTTTGTGCTATG-3'

|xx|||x|x||||||

3'-AGTGCATGAACCCCAAAACA-5'

GATA41G07-R AAAATCCTTTCAACAAATAGAAGC versus GGAA6D03N-F ATAGGATTTTATCACTCACAGATTT

Matches = 9

Score = 8

ANAGGATTTT

est. tm = 2.3 oC

DeltaG @37 degrees = -3.08 kcal/mole

5'-ATAGGATTTTATCACTCACAGATTT-3'

|x||||||||

3'-CGAAGATAAACAACTTTCCTAAAA-5'

TTCA004-R CCCAGAGCCTAAATCTGTGC versus GGAA6D03N-F ATAGGATTTTATCACTCACAGATTT

Matches = 9

Score = 8

AAATCTGTGN

est. tm = 21.2 oC

DeltaG @37 degrees = -6.03 kcal/mole

3'-TTTAGACACTCACTATTTTAGGATA-5'

|||||||||x

5'-CCCAGAGCCTAAATCTGTGC-3'

ATA27D04N-R AGTGGGTAGATCCTATGTGAGC versus GGAA6D03N-F ATAGGATTTTATCACTCACAGATTT

Matches = 12

Score = 8

ATAGGATNTNNNCACT

est. tm = 8.2 oC

DeltaG @37 degrees = -2.81 kcal/mole

5'-ATAGGATTTTATCACTCACAGATTT-3'

|||||||x|xxx||||

3'-CGAGTGTATCCTAGATGGGTGA-5'

GATA8A05-R TTTAACAGACAAATGACAAATCTG versus GGAA6D03N-F ATAGGATTTTATCACTCACAGATTT

Matches = 7

Score = 7

AAATCTG

est. tm = less than zero

DeltaG @37 degrees = -3.00 kcal/mole

3'-TTTAGACACTCACTATTTTAGGATA-5'

|||||||

5'-TTTAACAGACAAATGACAAATCTG-3'

GATA63F08-F TCTCTTACCCTTTGGGACCT versus GATA3H06-R CCTGGGGGTAAGAGGAGATA

Matches = 11

Score = 7

CCNNNGGGTAAGAGN

est. tm = 22.9 oC

DeltaG @37 degrees = -6.04 kcal/mole

5'-CCTGGGGGTAAGAGGAGATA-3'

||xxx|||||||||x

3'-TCCAGGGTTTCCCATTCTCT-5'

ATA78D02N-R GGCAAGAGAACTCACGTAA versus GATA63F08-F TCTCTTACCCTTTGGGACCT

Matches = 8

Score = 7

TCTCTTNCC

est. tm = less than 0 oC

DeltaG @37 degrees = -3.12 kcal/mole

5'-TCTCTTACCCTTTGGGACCT-3'

||||||x||

3'-AATGCACTCAAGAGAACGG-5'

GATA63F08-F TCTCTTACCCTTTGGGACCT versus GGAA20G04-R TTCACAAGGTTCCACAAGGT

Matches = 11

Score = 8

ACCNTNTGGNACCT

est. tm = 7.3 oC

DeltaG @37 degrees = -3.94 kcal/mole

3'-TGGAACACCTTGGAACACTT-5'

|||x|x|||x||||

5'-TCTCTTACCCTTTGGGACCT-3'

GATA189C06-F CCCCCATGAGTTATTCCTCT versus GATA8B01-F TGCCATAGCAGAGAGGGATA

Matches = 8

Score = 7

TATNCCTCT

est. tm = less than zero

DeltaG @37 degrees = -2.19 kcal/mole

3'-ATAGGGAGAGACGATACCGT-5'

|||x|||||

5'-CCCCCATGAGTTATTCCTCT-3'

MFD442-GTTT002-F GGAGTGAGTCCACCTTCCAA versus GGAA17G05-R ACACCTGGATCTTGGACTCA

Matches = 12

Score = 8

TGAGTCCANNNTCCAN

est. tm = 31.7 oC

DeltaG @37 degrees = -7.99 kcal/mole

3'-ACTCAGGTTCTAGGTCCACA-5'

||||||||xxx||||x

5'-GGAGTGAGTCCACCTTCCAA-3'

MFD442-GTTT002-F GGAGTGAGTCCACCTTCCAA versus ATA29G03Z-R ATTTGGAATAAGGCCTGACT

Matches = 13

Score = 8

AGTNAGNCCNNNTTCCAA

est. tm = 11.1 oC

DeltaG @37 degrees = -3.36 kcal/mole

3'-TCAGTCCGGAATAAGGTTTA-5'

|||x||x||xxx||||||

5'-GGAGTGAGTCCACCTTCCAA-3'

TTCA004-F CACCCAGCCCCTATGTTTTA versus ATAA018Z-F CTGGGTGACAGAGCAAGACC

Matches = 7

Score = 7

CTGGGTG

est. tm = 13.8 oC

DeltaG @37 degrees = -5.41 kcal/mole

5'-CTGGGTGACAGAGCAAGACC-3'

|||||||

3'-ATTTTGTATCCCCGACCCAC-5'

ATAA018Z-F CTGGGTGACAGAGCAAGACC versus ATA3A07-F GTCTGTAACCTAGGCAGGCA

Matches = 10

Score = 7

NTCTGTNACCNAG

est. tm = 11.0 oC

DeltaG @37 degrees = -4.26 kcal/mole

5'-GTCTGTAACCTAGGCAGGCA-3'

x|||||x|||x||

3'-CCAGAACGAGACAGTGGGTC-5'

ATAA018Z-F CTGGGTGACAGAGCAAGACC versus GATA2A12-F TGTGTTTGGGTTTCCTCTGT

Matches = 10

Score = 7

ACAGAGNAANNCC

est. tm = 2.7 oC

DeltaG @37 degrees = -2.79 kcal/mole

3'-TGTCTCCTTTGGGTTTGTGT-5'

||||||x||xx||

5'-CTGGGTGACAGAGCAAGACC-3'

ATAA018Z-F CTGGGTGACAGAGCAAGACC versus sRA-F CACTAGCACCCAGAACCGTC

Matches = 10

Score = 7

CNCTNNCACCCAG

est. tm = 8.8 oC

DeltaG @37 degrees = -3.81 kcal/mole

5'-CACTAGCACCCAGAACCGTC-3'

|x||xx|||||||

3'-CCAGAACGAGACAGTGGGTC-5'

ATAA018Z-F CTGGGTGACAGAGCAAGACC versus GATA27A03-F CAGTTACCCAGGAAGCTGAA

Matches = 9

Score = 7

CNGTNACCCAG

est. tm = 3.2 oC

DeltaG @37 degrees = -3.48 kcal/mole

5'-CAGTTACCCAGGAAGCTGAA-3'

|x||x||||||

3'-CCAGAACGAGACAGTGGGTC-5'

ATAA018Z-F CTGGGTGACAGAGCAAGACC versus GATA30G01-R AATGAGGTCTTACTTTGTTGCC

Matches = 13

Score = 9

GGNNACANAGNAAGACC

est. tm = 17.5 oC

DeltaG @37 degrees = -4.60 kcal/mole

3'-CCGTTGTTTCATTCTGGAGTAA-5'

||xx|||x||x||||||

5'-CTGGGTGACAGAGCAAGACC-3'

UT7129-F TAGAAGCCAGAAGAAGAGCA versus GATA89A11-F GCTTCTGAAAGCTTCTAGTTTACC

Matches = 12

Score = 7

NCTTCTNNNNGCTTCTA

est. tm = 19.5 oC

DeltaG @37 degrees = -4.82 kcal/mole

5'-GCTTCTGAAAGCTTCTAGTTTACC-3'

x|||||xxxx|||||||

3'-ACGAGAAGAAGACCGAAGAT-5'

UT7129-F TAGAAGCCAGAAGAAGAGCA versus GATA81D05-F GTGGTCTTCTACTTGTGTCAATAC

Matches = 14

Score = 8

TGNTCTTCTNCTNGNNTCNA

est. tm = less than zero

DeltaG @37 degrees = -0.19 kcal/mole

5'-GTGGTCTTCTACTTGTGTCAATAC-3'

||x||||||x||x|xx||x|

3'-ACGAGAAGAAGACCGAAGAT-5'

UT6540-F TTCCTCTGGCTTCTAGAAG versus UT7129-F TAGAAGCCAGAAGAAGAGCA

Matches = 14

Score = 13

TAGAAGCCAGANGAA

est. tm = 36.7 oC

DeltaG @37 degrees = -9.27 kcal/mole

5'-TAGAAGCCAGAAGAAGAGCA-3'

|||||||||||x|||

3'-GAAGATCTTCGGTCTCCTT-5'

UT7129-F TAGAAGCCAGAAGAAGAGCA versus GATA32B03-F AATAGTGACATTCTCTTCTTATGGC

Matches = 13

Score = 11

GCCANAAGAAGAGNA

est. tm = 28.0 oC

DeltaG @37 degrees = -7.02 kcal/mole

3'-CGGTATTCTTCTCTTACAGTGATAA-5'

||||x||||||||x|

5'-TAGAAGCCAGAAGAAGAGCA-3'

UT7129-F TAGAAGCCAGAAGAAGAGCA versus GATA11C06N-F GATCCCAAGCTCTTCCTCTT

Matches = 10

Score = 7

NAGANGAAGAGCN

est. tm = 24.3 oC

DeltaG @37 degrees = -6.59 kcal/mole

3'-TTCTCCTTCTCGAACCCTAG-5'

x|||x|||||||x

5'-TAGAAGCCAGAAGAAGAGCA-3'

GATA8G10-F GGGACAGAGAAGCAGAGAAG versus GATA21D04-F TAGGTTCTGGGCATGTCTGT

Matches = 12

Score = 7

ACAGANANGCNNAGAAN

est. tm = 12.3 oC

DeltaG @37 degrees = -3.95 kcal/mole

3'-TGTCTGTACGGGTCTTGGAT-5'

|||||x|x||xx||||x

5'-GGGACAGAGAAGCAGAGAAG-3'

GATA41A01-F GTGTTGACCAACTGGGTAGC versus GATA23D03N-R ATTCTTTGTCTCCCCAGTTG

Matches = 10

Score = 8

CAACTGGGNAGN

est. tm = 25.4 oC

DeltaG @37 degrees = -6.87 kcal/mole

3'-GTTGACCCCTCTGTTTCTTA-5'

||||||||x||x

5'-GTGTTGACCAACTGGGTAGC-3'

GATA41A01-F GTGTTGACCAACTGGGTAGC versus GATA45B10N-F GTGGTGAACACCAATAAATGG

Matches = 9

Score = 7

NTGGTNAACAC

est. tm = 16.2 oC

DeltaG @37 degrees = -5.26 kcal/mole

5'-GTGGTGAACACCAATAAATGG-3'

x||||x|||||

3'-CGATGGGTCAACCAGTTGTG-5'

GATA41A01-F GTGTTGACCAACTGGGTAGC versus GATA12H10-R TTGGTCAACATGTCAATTTAGG

Matches = 10

Score = 9

TTGGTCAACAN

est. tm = 32.6 oC

DeltaG @37 degrees = -8.33 kcal/mole

5'-TTGGTCAACATGTCAATTTAGG-3'

||||||||||x

3'-CGATGGGTCAACCAGTTGTG-5'

GATA41A01-F GTGTTGACCAACTGGGTAGC versus GATA63D12-R AATATTGACTTTCTCTTGCTACCC

Matches = 7

Score = 7

GGGTAGC

est. tm = 13.3 oC

DeltaG @37 degrees = -5.32 kcal/mole

3'-CCCATCGTTCTCTTTCAGTTATAA-5'

|||||||

5'-GTGTTGACCAACTGGGTAGC-3'

UT254-F TCTCAGTGAAGGTAGACAGGA versus GATA7G07-F TTTTTGTATTTCATGTGTACATTCG

Matches = 11

Score = 7

NGAANGTANACANGA

est. tm = less than zero

DeltaG @37 degrees = -1.75 kcal/mole

3'-GCTTACATGTGTACTTTATGTTTTT-5'

x|||x|||x|||x||

5'-TCTCAGTGAAGGTAGACAGGA-3'

GATA7G07-F TTTTTGTATTTCATGTGTACATTCG versus GATA52B03-R AAGTAAACATGTATAGGAAAAAGCT

Matches = 15

Score = 8

ANGTANACATGNANNNNAAAAA

est. tm = 2.5 oC

DeltaG @37 degrees = -0.30 kcal/mole

5'-AAGTAAACATGTATAGGAAAAAGCT-3'

|x|||x|||||x|xxxx|||||

3'-GCTTACATGTGTACTTTATGTTTTT-5'

GATA178G09-F ATGGGTGGATGTACAAATGG versus GATA7G07-F TTTTTGTATTTCATGTGTACATTCG

Matches = 11

Score = 7

NGNATGTACANATGN

est. tm = 13.4 oC

DeltaG @37 degrees = -4.20 kcal/mole

3'-GCTTACATGTGTACTTTATGTTTTT-5'

x|x|||||||x|||x

5'-ATGGGTGGATGTACAAATGG-3'

GGAA2F11N-F AAGATACACAGGAAGAAAGAAAGG versus GATA7G07-F TTTTTGTATTTCATGTGTACATTCG

Matches = 15

Score = 7

NTTTNNTNNTTCNTGTGTANNTT

est. tm = 6.3 oC

DeltaG @37 degrees = -1.09 kcal/mole

5'-TTTTTGTATTTCATGTGTACATTCG-3'

x|||xx|xx|||x||||||xx||

3'-GGAAAGAAAGAAGGACACATAGAA-5'

GATA27A12-R TGGCACATGTACACCAGAAC versus GATA7G07-F TTTTTGTATTTCATGTGTACATTCG

Matches = 12

Score = 7

CNNATGTACACNNGAAN

est. tm = 14.2 oC

DeltaG @37 degrees = -3.72 kcal/mole

3'-GCTTACATGTGTACTTTATGTTTTT-5'

|xx||||||||xx|||x

5'-TGGCACATGTACACCAGAAC-3'

GGAA4B09N-R CACACTCAAAATACATGAAGGC versus GATA7G07-F TTTTTGTATTTCATGTGTACATTCG

Matches = 13

Score = 7

TTNNTGTATTTNNNGTGTN

est. tm = 14.5 oC

DeltaG @37 degrees = -3.41 kcal/mole

5'-TTTTTGTATTTCATGTGTACATTCG-3'

||xx|||||||xxx||||x

3'-CGGAAGTACATAAAACTCACAC-5'

GATA50D10-F ATGCCTACAAAAACCAGTGC versus AGAT113Z-R CGCTACCACGGGTGTTTTTA

Matches = 11

Score = 7

TANAAANACCNGTGN

est. tm = 0.7 oC

DeltaG @37 degrees = -2.37 kcal/mole

3'-ATTTTTGTGGGCACCATCGC-5'

||x|||x|||x|||x

5'-ATGCCTACAAAAACCAGTGC-3'

MFD455-AAT052-F TTCAGATGCCAGCTTCAAGA versus GATA89A11-F GCTTCTGAAAGCTTCTAGTTTACC

Matches = 8

Score = 7

GCNTCTGAA

est. tm = 4.0 oC

DeltaG @37 degrees = -3.69 kcal/mole

5'-GCTTCTGAAAGCTTCTAGTTTACC-3'

||x||||||

3'-AGAACTTCGACCGTAGACTT-5'

GATA62F03N-F TTCCCAAAAGTTGCCATCTA versus GATA23F08-R TATATTTCTTGGGAAAGATAGATGG

Matches = 7

Score = 7

CCATCTA

est. tm = 0.3 oC

DeltaG @37 degrees = -3.39 kcal/mole

3'-GGTAGATAGAAAGGGTTCTTTATAT-5'

|||||||

5'-TTCCCAAAAGTTGCCATCTA-3'

GATA62F03N-F TTCCCAAAAGTTGCCATCTA versus GATA81C04-R TTAGCTGCTTCTGGGAAAGA

Matches = 12

Score = 7

NTNGCNNCTTNTGGGAA

est. tm = 12.9 oC

DeltaG @37 degrees = -4.17 kcal/mole

5'-TTAGCTGCTTCTGGGAAAGA-3'

x|x||xx|||x||||||

3'-ATCTACCGTTGAAAACCCTT-5'

GATA62F03N-F TTCCCAAAAGTTGCCATCTA versus ATA59H06Z-R CTACTGCTGGGAATACCAGA

Matches = 10

Score = 7

CNACTNNTGGGAA

est. tm = 5.4 oC

DeltaG @37 degrees = -3.33 kcal/mole

5'-CTACTGCTGGGAATACCAGA-3'

|x|||xx||||||

3'-ATCTACCGTTGAAAACCCTT-5'

GATA62F03N-F TTCCCAAAAGTTGCCATCTA versus GATA116B01N-F ATGGCCTATTGTGGGATCTT

Matches = 12

Score = 7

ATGGCNNNTTNTGGGAN

est. tm = 24.5 oC

DeltaG @37 degrees = -6.43 kcal/mole

5'-ATGGCCTATTGTGGGATCTT-3'

|||||xxx||x|||||x

3'-ATCTACCGTTGAAAACCCTT-5'

GATA62F03N-F TTCCCAAAAGTTGCCATCTA versus GATA8C04-F AGACCCTGTCTCAGATAGATGG

Matches = 7

Score = 7

CCATCTA

est. tm = 0.3 oC

DeltaG @37 degrees = -3.39 kcal/mole

3'-GGTAGATAGACTCTGTCCCAGA-5'

|||||||

5'-TTCCCAAAAGTTGCCATCTA-3'

GATA62F03N-F TTCCCAAAAGTTGCCATCTA versus ATA7D07-R ACGGGAGCTTTTGAGAAGTT

Matches = 13

Score = 9

ANGGNANCTTTTGNGAA

est. tm = less than 0 oC

DeltaG @37 degrees = -1.51 kcal/mole

5'-ACGGGAGCTTTTGAGAAGTT-3'

|x||x|x||||||x|||

3'-ATCTACCGTTGAAAACCCTT-5'

AGAT142-F ATCCCATGCTCTGGTGCTAC versus GATA27-F AAGTGTTGCATCAGAGCCTC

Matches = 12

Score = 8

NANGCTCTGNTGCNAC

est. tm = 20.7 oC

DeltaG @37 degrees = -5.65 kcal/mole

3'-CTCCGAGACTACGTTGTGAA-5'

x|x||||||x|||x||

5'-ATCCCATGCTCTGGTGCTAC-3'

AGAT142-F ATCCCATGCTCTGGTGCTAC versus GATA175D03-R CAGGAGTATGGGATCACCAG

Matches = 11

Score = 8

CNNGAGNATGGGAT

est. tm = 9.8 oC

DeltaG @37 degrees = -3.64 kcal/mole

5'-CAGGAGTATGGGATCACCAG-3'

|xx|||x|||||||

3'-CATCGTGGTCTCGTACCCTA-5'

AGAT142-F ATCCCATGCTCTGGTGCTAC versus ATT070-R GGCAGTAGAGCCAGACCTTG

Matches = 12

Score = 8

CANGNTCTGGNNCTAC

est. tm = 6.9 oC

DeltaG @37 degrees = -2.64 kcal/mole

3'-GTTCCAGACCGAGATGACGG-5'

||x|x|||||xx||||

5'-ATCCCATGCTCTGGTGCTAC-3'

GATA5E06-F GTGCACCTCTACACCCAGAC versus GATA12F04-F AGCCATCTGGGCTTAGAGAT

Matches = 12

Score = 8

ANCTCTANNCCCAGAN

est. tm = 20.2 oC

DeltaG @37 degrees = -5.47 kcal/mole

3'-TAGAGATTCGGGTCTACCGA-5'

|x|||||xx||||||x

5'-GTGCACCTCTACACCCAGAC-3'

GATA5E06-F GTGCACCTCTACACCCAGAC versus GATA175D03-F TGGAGTCTCTGGGTGAAGAG

Matches = 12

Score = 10

CTCTNCACCCAGAN

est. tm = 36.4 oC

DeltaG @37 degrees = -9.21 kcal/mole

3'-GAGAAGTGGGTCTCTGAGGT-5'

||||x||||||||x

5'-GTGCACCTCTACACCCAGAC-3'

GATA5E06-F GTGCACCTCTACACCCAGAC versus GATA11E02N-R AGTGCTAGACTGGGAGAAGA

Matches = 10

Score = 7

TCTNCNCCCAGNC

est. tm = less than zero

DeltaG @37 degrees = -2.15 kcal/mole

3'-AGAAGAGGGTCAGATCGTGA-5'

|||x|x|||||x|

5'-GTGCACCTCTACACCCAGAC-3'

GATA73H09N-R ATATTTCAGAACCGCAGCAG versus GATA89A11-F GCTTCTGAAAGCTTCTAGTTTACC

Matches = 10

Score = 7

GNTTCTGAAANNT

est. tm = less than 0 oC

DeltaG @37 degrees = -1.57 kcal/mole

5'-GCTTCTGAAAGCTTCTAGTTTACC-3'

|x||||||||xx|

3'-GACGACGCCAAGACTTTATA-5'

GATA81D05-R CTCAAGTCCCAAAAATGAGG versus GATA81C04-F TAGGATTTGAGACAAATGAAAGC

Matches = 9

Score = 7

TNGGANTTGAG

est. tm = less than 0 oC

DeltaG @37 degrees = -2.33 kcal/mole

5'-TAGGATTTGAGACAAATGAAAGC-3'

|x|||x|||||

3'-GGAGTAAAAACCCTGAACTC-5'

GATG011-F CTCAAAGCCTGTGGAGGTCT versus GATA81C04-F TAGGATTTGAGACAAATGAAAGC

Matches = 9

Score = 7

NAGGNTTTGAG

est. tm = 11.1 oC

DeltaG @37 degrees = -4.34 kcal/mole

5'-TAGGATTTGAGACAAATGAAAGC-3'

x|||x||||||

3'-TCTGGAGGTGTCCGAAACTC-5'

ATA4E02-R CTGCTTTGGGTTTCACTTGT versus GATA81C04-F TAGGATTTGAGACAAATGAAAGC

Matches = 10

Score = 8

GNTTTCANTTGT

est. tm = 2.3 oC

DeltaG @37 degrees = -2.56 kcal/mole

3'-CGAAAGTAAACAGAGTTTAGGAT-5'

|x|||||x||||

5'-CTGCTTTGGGTTTCACTTGT-3'

sRA-R CCTTGTCAGCGTTTATTTGCC versus GATA81C04-F TAGGATTTGAGACAAATGAAAGC

Matches = 10

Score = 7

GCNTTNATTTGNC

est. tm = less than zero

DeltaG @37 degrees = -0.81 kcal/mole

3'-CGAAAGTAAACAGAGTTTAGGAT-5'

||x||x|||||x|

5'-CCTTGTCAGCGTTTATTTGCC-3'

GATA31-R TCATGTGAGCCAATTCCTCT versus GATA81C04-F TAGGATTTGAGACAAATGAAAGC

Matches = 13

Score = 7

NAGGANTTGNNNCANATGA

est. tm = 11.4 oC

DeltaG @37 degrees = -3.24 kcal/mole

5'-TAGGATTTGAGACAAATGAAAGC-3'

x||||x|||xxx||x||||

3'-TCTCCTTAACCGAGTGTACT-5'

GATA11C08-R GGCTGCAGTTAGCTGTCATT versus GATA81C04-F TAGGATTTGAGACAAATGAAAGC

Matches = 8

Score = 7

GCTNTCATT

est. tm = 1.0 oC

DeltaG @37 degrees = -3.25 kcal/mole

3'-CGAAAGTAAACAGAGTTTAGGAT-5'

|||x|||||

5'-GGCTGCAGTTAGCTGTCATT-3'

GATA27-F AAGTGTTGCATCAGAGCCTC versus ATA59H06Z-F AAAGCGAGACTCTGTCTCAA

Matches = 11

Score = 7

TTGNNNCAGAGNCTC

est. tm = 5.9 oC

DeltaG @37 degrees = -2.61 kcal/mole

3'-AACTCTGTCTCAGAGCGAAA-5'

|||xxx|||||x|||

5'-AAGTGTTGCATCAGAGCCTC-3'

GATA27-F AAGTGTTGCATCAGAGCCTC versus ATA34E08N-F TGCACCACTTCATATTTCCA

Matches = 9

Score = 8

TGCANCACTT

est. tm = 14.4 oC

DeltaG @37 degrees = -5.09 kcal/mole

5'-TGCACCACTTCATATTTCCA-3'

||||x|||||

3'-CTCCGAGACTACGTTGTGAA-5'

GATA27-F AAGTGTTGCATCAGAGCCTC versus ATA24A08-F GCAGCACTTGGCAAATACTC

Matches = 8

Score = 7

GCANCACTT

est. tm = 5.7 oC

DeltaG @37 degrees = -3.98 kcal/mole

5'-GCAGCACTTGGCAAATACTC-3'

|||x|||||

3'-CTCCGAGACTACGTTGTGAA-5'

GATA27-F AAGTGTTGCATCAGAGCCTC versus GATA27A12-F GTGGCTTTGGAGGAACACTA

Matches = 14

Score = 8

GNGGCTNTGNNGNAACACTN

est. tm = 19.0 oC

DeltaG @37 degrees = -4.88 kcal/mole

5'-GTGGCTTTGGAGGAACACTA-3'

|x||||x||xx|x||||||x

3'-CTCCGAGACTACGTTGTGAA-5'

GATA27-F AAGTGTTGCATCAGAGCCTC versus GATA27A12-F GTGGCTTTGGAGGAACACTA

Matches = 14

Score = 8

NAGTGTTNCNNCANAGCCNC

est. tm = 17.4 oC

DeltaG @37 degrees = -4.48 kcal/mole

3'-ATCACAAGGAGGTTTCGGTG-5'

x||||||x|xx||x||||x|

5'-AAGTGTTGCATCAGAGCCTC-3'

GATA27-F AAGTGTTGCATCAGAGCCTC versus GATA84E11-F TGTTGGAAGACTTCTCAGCC

Matches = 10

Score = 7

TGNTGNAANACTT

est. tm = less than 0 oC

DeltaG @37 degrees = -0.77 kcal/mole

5'-TGTTGGAAGACTTCTCAGCC-3'

||x||x||x||||

3'-CTCCGAGACTACGTTGTGAA-5'

GATA27-F AAGTGTTGCATCAGAGCCTC versus GGAT3F08-F TTTTCCAGAAGCTCAGATCC

Matches = 10

Score = 7

GNATCNGAGCNTC

est. tm = less than zero

DeltaG @37 degrees = -1.54 kcal/mole

3'-CCTAGACTCGAAGACCTTTT-5'

|x|||x||||x||

5'-AAGTGTTGCATCAGAGCCTC-3'

GATA68F07-F ATTGCTTCCCCTTTACCTGA versus GATA64G07-F TTTCCTAGTAGCTCAAGTAAAGAGG

Matches = 11

Score = 9

CCNCTTTACNTGA

est. tm = 9.7 oC

DeltaG @37 degrees = -3.51 kcal/mole

3'-GGAGAAATGAACTCGATGATCCTTT-5'

||x||||||x|||

5'-ATTGCTTCCCCTTTACCTGA-3'

GATA73E11-F TTGGTGGTGTCATCCTCTTT versus GATA64G07-F TTTCCTAGTAGCTCAAGTAAAGAGG

Matches = 7

Score = 7

CCTCTTT

est. tm = 2.9 oC

DeltaG @37 degrees = -3.78 kcal/mole

3'-GGAGAAATGAACTCGATGATCCTTT-5'

|||||||

5'-TTGGTGGTGTCATCCTCTTT-3'

GGAA19H07-R GCCAAGCACTCTTTTCTTCA versus GATA64G07-F TTTCCTAGTAGCTCAAGTAAAGAGG

Matches = 10

Score = 7

NCTCTTTNCTTNA

est. tm = less than zero

DeltaG @37 degrees = -2.33 kcal/mole

3'-GGAGAAATGAACTCGATGATCCTTT-5'

x||||||x|||x|

5'-GCCAAGCACTCTTTTCTTCA-3'

GATA88F09-F TACTTGGGATGCTAAGGTGG versus AGAT060-R TACCATGCCAAGGACATCAA

Matches = 11

Score = 8

TANCATNCCAAGNA

est. tm = less than 0 oC

DeltaG @37 degrees = -1.32 kcal/mole

5'-TACCATGCCAAGGACATCAA-3'

||x|||x|||||x|

3'-GGTGGAATCGTAGGGTTCAT-5'

GATA88F09-F TACTTGGGATGCTAAGGTGG versus ATA12D05-R CACCTCAGCCTCTTTGGTAG

Matches = 13

Score = 7

CACCTNAGCNTCNNNNGTA

est. tm = 11.5 oC

DeltaG @37 degrees = -3.16 kcal/mole

5'-CACCTCAGCCTCTTTGGTAG-3'

|||||x|||x||xxxx|||

3'-GGTGGAATCGTAGGGTTCAT-5'

GATA88F09-F TACTTGGGATGCTAAGGTGG versus ATA45G06-R GCCTCTTGTCATCCCAAGTA

Matches = 15

Score = 10

NCNNCTTNNCATCCCAAGTA

est. tm = 28.4 oC

DeltaG @37 degrees = -6.76 kcal/mole

5'-GCCTCTTGTCATCCCAAGTA-3'

x|xx|||xx|||||||||||

3'-GGTGGAATCGTAGGGTTCAT-5'

GATA88F09-F TACTTGGGATGCTAAGGTGG versus ATA45G06-R GCCTCTTGTCATCCCAAGTA

Matches = 15

Score = 10

TACTTGGGATGNNAAGNNGN

est. tm = 29.7 oC

DeltaG @37 degrees = -7.16 kcal/mole

3'-ATGAACCCTACTGTTCTCCG-5'

|||||||||||xx|||xx|x

5'-TACTTGGGATGCTAAGGTGG-3'

GATA88F09-F TACTTGGGATGCTAAGGTGG versus GATG011-R CCACCACGGTATCATCCAAT

Matches = 12

Score = 7

NTNGGATGNTANNGTGG

est. tm = 8.3 oC

DeltaG @37 degrees = -3.06 kcal/mole

3'-TAACCTACTATGGCACCACC-5'

x|x|||||x||xx||||

5'-TACTTGGGATGCTAAGGTGG-3'

ATA31G11N-F GCTCCTGCGTACTGAGATA versus ATA29C07-R CCAGTACGCAGATGGTCCTA

Matches = 11

Score = 7

NCAGTACGCAGNNGN

est. tm = 31.4 oC

DeltaG @37 degrees = -7.97 kcal/mole

5'-CCAGTACGCAGATGGTCCTA-3'

x||||||||||xx|x

3'-ATAGAGTCATGCGTCCTCG-5'

ATA31G11N-F GCTCCTGCGTACTGAGATA versus ATA4E02-F TACTCAGGAGGCAGAGATGG

Matches = 9

Score = 7

TACNCAGGAGN

est. tm = 12.0 oC

DeltaG @37 degrees = -4.70 kcal/mole

5'-TACTCAGGAGGCAGAGATGG-3'

|||x||||||x

3'-ATAGAGTCATGCGTCCTCG-5'

ATA31G11N-F GCTCCTGCGTACTGAGATA versus ATTT030-F GGGTCCATTAGTTGAGTATGCAG

Matches = 11

Score = 7

CTGCNTACTNANNTA

est. tm = less than zero

DeltaG @37 degrees = -1.09 kcal/mole

3'-GACGTATGAGTTGATTACCTGGG-5'

||||x||||x|xx||

5'-GCTCCTGCGTACTGAGATA-3'

UT1772-F ATGAGGCTGGCAGACTCG versus GATA70E11-F GGCAGCCTAATAGTTCCGAT

Matches = 9

Score = 7

GNCAGCCTNAT

est. tm = less than 0 oC

DeltaG @37 degrees = -3.07 kcal/mole

5'-GGCAGCCTAATAGTTCCGAT-3'

|x||||||x||

3'-GCTCAGACGGTCGGAGTA-5'

GATA70E11-F GGCAGCCTAATAGTTCCGAT versus GATA188F04-F AACAGAACCAATAGGCTATCTATC

Matches = 14

Score = 8

ANCNGAACNANTAGGCTNNC

est. tm = less than 0 oC

DeltaG @37 degrees = -0.99 kcal/mole

5'-AACAGAACCAATAGGCTATCTATC-3'

|x|x||||x|x||||||xx|

3'-TAGCCTTGATAATCCGACGG-5'

GATA70E11-F GGCAGCCTAATAGTTCCGAT versus GATA25A04-R GTGCATTATGGGGACCATTA

Matches = 10

Score = 7

TAATNGTNCCNAT

est. tm = less than zero

DeltaG @37 degrees = greater than zero

3'-ATTACCAGGGGTATTACGTG-5'

||||x||x||x||

5'-GGCAGCCTAATAGTTCCGAT-3'

ATA5A04N-F TGCCACTGACTTCATTGCTA versus GATA52B03-F GAGCAATGATCTCATTTGCA

Matches = 15

Score = 10

NAGCAATGANNTCANTNGCA

est. tm = 30.4 oC

DeltaG @37 degrees = -7.45 kcal/mole

5'-GAGCAATGATCTCATTTGCA-3'

x||||||||xx|||x|x|||

3'-ATCGTTACTTCAGTCACCGT-5'

ATA5A04N-F TGCCACTGACTTCATTGCTA versus GATA52B03-F GAGCAATGATCTCATTTGCA

Matches = 15

Score = 10

TGCNANTGANNTCATTGCTN

est. tm = 31.8 oC

DeltaG @37 degrees = -7.85 kcal/mole

3'-ACGTTTACTCTAGTAACGAG-5'

|||x|x|||xx||||||||x

5'-TGCCACTGACTTCATTGCTA-3'

ATA5A04N-F TGCCACTGACTTCATTGCTA versus GATA193A07-R AGCCTGTGGCATCTTGTTAG

Matches = 9

Score = 7

AGNCNGTGGCA

est. tm = 3.1 oC

DeltaG @37 degrees = -3.77 kcal/mole

5'-AGCCTGTGGCATCTTGTTAG-3'

||x|x||||||

3'-ATCGTTACTTCAGTCACCGT-5'

ATA24F10-F TCCTTTGTCAGTCATGCTCA versus GATA70E11-R AGTTTGCAGTGAGCATGGTT

Matches = 9

Score = 7

ANNCATGCTCA

est. tm = 9.2 oC

DeltaG @37 degrees = -4.13 kcal/mole

3'-TTGGTACGAGTGACGTTTGA-5'

|xx||||||||

5'-TCCTTTGTCAGTCATGCTCA-3'

ATA24F10-F TCCTTTGTCAGTCATGCTCA versus GATA21D04-F TAGGTTCTGGGCATGTCTGT

Matches = 10

Score = 7

NCAGNCATGCNCA

est. tm = 11.2 oC

DeltaG @37 degrees = -4.34 kcal/mole

3'-TGTCTGTACGGGTCTTGGAT-5'

x|||x|||||x||

5'-TCCTTTGTCAGTCATGCTCA-3'

GATA49C09N-F GCAACAGAGCAAGACTGTC versus ATA24F10-F TCCTTTGTCAGTCATGCTCA

Matches = 11

Score = 8

NGAGCANGACTGNC

est. tm = 20.6 oC

DeltaG @37 degrees = -5.70 kcal/mole

3'-ACTCGTACTGACTGTTTCCT-5'

x|||||x|||||x|

5'-GCAACAGAGCAAGACTGTC-3'

ATA24F10-F TCCTTTGTCAGTCATGCTCA versus GATA165G02N-R CTGTCACAGGACTTTTCAGCC

Matches = 9

Score = 7

CTGNCANAGGA

est. tm = less than 0 oC

DeltaG @37 degrees = -2.74 kcal/mole

5'-CTGTCACAGGACTTTTCAGCC-3'

|||x||x||||

3'-ACTCGTACTGACTGTTTCCT-5'

UT721-F TTGGTCTCCTCTGATGGGT versus GATA87G01-F CAGTGGACACTAAACACAATCC

Matches = 10

Score = 7

CAGNGGANACNAA

est. tm = less than 0 oC

DeltaG @37 degrees = -1.50 kcal/mole

5'-CAGTGGACACTAAACACAATCC-3'

|||x|||x||x||

3'-TGGGTAGTCTCCTCTGGTT-5'

GATA31D10-F GTGGGACCTTGTGATTGTGT versus GATA87G01-F CAGTGGACACTAAACACAATCC

Matches = 8

Score = 7

NGATTGTGT

est. tm = 14.3 oC

DeltaG @37 degrees = -5.07 kcal/mole

3'-CCTAACACAAATCACAGGTGAC-5'

x||||||||

5'-GTGGGACCTTGTGATTGTGT-3'

ATA33B03Z-R TAGTATCCACTTCCTGGGGT versus GATA87G01-F CAGTGGACACTAAACACAATCC

Matches = 10

Score = 8

NAGTGGANACTA

est. tm = 18.4 oC

DeltaG @37 degrees = -5.47 kcal/mole

5'-CAGTGGACACTAAACACAATCC-3'

x||||||x||||

3'-TGGGGTCCTTCACCTATGAT-5'

GATA63F09-R CTGTCTAGTGTCCTGAGCTGC versus GATA87G01-F CAGTGGACACTAAACACAATCC

Matches = 12

Score = 7

CNNNGGACACTANACAN

est. tm = 19.0 oC

DeltaG @37 degrees = -4.95 kcal/mole

5'-CAGTGGACACTAAACACAATCC-3'

|xxx||||||||x|||x

3'-CGTCGAGTCCTGTGATCTGTC-5'

GATA145D10N-R TTGAGCCCAGAAGTTTGAG versus GATA115E01N-F CCTCCTAGCTCCTCAAGCTT

Matches = 8

Score = 7

AAGNTTGAG

est. tm = less than zero

DeltaG @37 degrees = -2.45 kcal/mole

3'-TTCGAACTCCTCGATCCTCC-5'

|||x|||||

5'-TTGAGCCCAGAAGTTTGAG-3'

GATA115E01N-F CCTCCTAGCTCCTCAAGCTT versus MFD455-AAT052-R GATGAGCCAGGAAGCCATAA

Matches = 11

Score = 8

GANGAGCNAGGANG

est. tm = 7.9 oC

DeltaG @37 degrees = -3.50 kcal/mole

5'-GATGAGCCAGGAAGCCATAA-3'

||x||||x||||x|

3'-TTCGAACTCCTCGATCCTCC-5'

GATA72G11N-R CAAAATTAGCTGGGTATTGTCTAG versus GATA64A09-F CCCTAGCTAATGTTAAAATATCACG

Matches = 11

Score = 7

NCCNAGCTAATNTTN

est. tm = 15.5 oC

DeltaG @37 degrees = -4.71 kcal/mole

5'-CCCTAGCTAATGTTAAAATATCACG-3'

x||x|||||||x||x

3'-GATCTGTTATGGGTCGATTAAAAC-5'

GATA64A09-F CCCTAGCTAATGTTAAAATATCACG versus GATA124E07-R ATATTCTTATATTCCATATGGCACA

Matches = 14

Score = 7

ATATTNTNANATTNNNTANGG

est. tm = less than 0 oC

DeltaG @37 degrees = > 0 kcal/mole

5'-ATATTCTTATATTCCATATGGCACA-3'

|||||x|x|x|||xxx||x||

3'-GCACTATAAAATTGTAATCGATCCC-5'

GATA64A09-F CCCTAGCTAATGTTAAAATATCACG versus GATA138B05-F TGGAAATCTTAAGAATATCTAGGTG

Matches = 16

Score = 8

NNGANATNTTAANANTANCTAGGN

est. tm = 4.8 oC

DeltaG @37 degrees = -0.85 kcal/mole

5'-TGGAAATCTTAAGAATATCTAGGTG-3'

xx||x||x||||x|x||x|||||x

3'-GCACTATAAAATTGTAATCGATCCC-5'

GATA64D03-F ACATTTCCAAGGGCTACACA versus GATA64A09-F CCCTAGCTAATGTTAAAATATCACG

Matches = 10

Score = 7

CCCTNGNNAATGT

est. tm = 2.7 oC

DeltaG @37 degrees = -2.89 kcal/mole

5'-CCCTAGCTAATGTTAAAATATCACG-3'

||||x|xx|||||

3'-ACACATCGGGAACCTTTACA-5'

GATA48D07-R TGTAACAAGGGCTATGGGAA versus GATA64A09-F CCCTAGCTAATGTTAAAATATCACG

Matches = 12

Score = 7

CCNTAGCNNNTGTTANA

est. tm = 2.0 oC

DeltaG @37 degrees = -1.68 kcal/mole

5'-CCCTAGCTAATGTTAAAATATCACG-3'

||x||||xxx|||||x|

3'-AAGGGTATCGGGAACAATGT-5'

ATA29C03-F GACTCTGCTAAGCACATTTCC versus GATA28D01-R TTTGAAGATCTGTGAAATGTGC

Matches = 9

Score = 8

GCACATTTCN

est. tm = 26.5 oC

DeltaG @37 degrees = -7.04 kcal/mole

3'-CGTGTAAAGTGTCTAGAAGTTT-5'

|||||||||x

5'-GACTCTGCTAAGCACATTTCC-3'

ATA29C03-F GACTCTGCTAAGCACATTTCC versus ATA21A03-F TGCTTACCATAATCAACATTGA

Matches = 11

Score = 8

TGCTTANCANANTC

est. tm = 0.9 oC

DeltaG @37 degrees = -2.23 kcal/mole

5'-TGCTTACCATAATCAACATTGA-3'

||||||x||x|x||

3'-CCTTTACACGAATCGTCTCAG-5'

UT1772-F ATGAGGCTGGCAGACTCG versus ATA29C03-F GACTCTGCTAAGCACATTTCC

Matches = 12

Score = 7

GANTCTGCNANNCNCAT

est. tm = less than 0 oC

DeltaG @37 degrees = -1.16 kcal/mole

5'-GACTCTGCTAAGCACATTTCC-3'

||x|||||x|xx|x|||

3'-GCTCAGACGGTCGGAGTA-5'

ATGT006Z-R CTGCACAGCAGAGTGAGACC versus ATA29C03-F GACTCTGCTAAGCACATTTCC

Matches = 11

Score = 7

NACTCTGCTNNGCAN

est. tm = 33.8 oC

DeltaG @37 degrees = -8.59 kcal/mole

5'-GACTCTGCTAAGCACATTTCC-3'

x||||||||xx|||x

3'-CCAGAGTGAGACGACACGTC-5'

GGAA23C05N-F GGAATAAGTGCAGTGCTTGG versus ATA31G11N-R GCACAGTACTTCTCCCTCCA

Matches = 12

Score = 8

GCACNGNACTTNTNCC

est. tm = 4.5 oC

DeltaG @37 degrees = -2.69 kcal/mole

5'-GCACAGTACTTCTCCCTCCA-3'

||||x|x||||x|x||

3'-GGTTCGTGACGTGAATAAGG-5'

GGAA23C05N-F GGAATAAGTGCAGTGCTTGG versus GAAT1A4N-R CCCAAGGGCAGAAATTATTA

Matches = 13

Score = 7

NAATAANTNCNGNNCTTGG

est. tm = less than zero

DeltaG @37 degrees = -0.37 kcal/mole

3'-ATTATTAAAGACGGGAACCC-5'

x|||||x|x|x|xx|||||

5'-GGAATAAGTGCAGTGCTTGG-3'

GGAA17G05-F GGGTGACAGAGCAAAATTCT versus GATA7C06-R TAGGATTTTACTATATTCCCCAGG

Matches = 14

Score = 8

AGNATTTTNCTNTNTNNCCC

est. tm = less than zero

DeltaG @37 degrees = -0.12 kcal/mole

5'-TAGGATTTTACTATATTCCCCAGG-3'

||x|||||x||x|x|xx|||

3'-TCTTAAAACGAGACAGTGGG-5'

GATA23F06-F TACATGGCAGCAGGCATATA versus GATA23F06-F TACATGGCAGCAGGCATATA

Matches = 14

Score = 8

TANATGNCNGCNGNCATNTA

est. tm = less than 0 oC

DeltaG @37 degrees = > 0 kcal/mole

5'-TACATGGCAGCAGGCATATA-3'

||x|||x|x||x|x|||x||

3'-ATATACGGACGACGGTACAT-5'

GATA23F06-F TACATGGCAGCAGGCATATA versus GATA23F06-F TACATGGCAGCAGGCATATA

Matches = 14

Score = 8

TANATGNCNGCNGNCATNTA

est. tm = less than zero

DeltaG @37 degrees = greater than zero

3'-ATATACGGACGACGGTACAT-5'

||x|||x|x||x|x|||x||

5'-TACATGGCAGCAGGCATATA-3'

GATA23F06-F TACATGGCAGCAGGCATATA versus ATCC001-F TGCCCTGTATTCTGTGTAGCA

Matches = 8

Score = 7

TGCCNTGTA

est. tm = 4.4 oC

DeltaG @37 degrees = -4.04 kcal/mole

5'-TGCCCTGTATTCTGTGTAGCA-3'

||||x||||

3'-ATATACGGACGACGGTACAT-5'

ATA34E08N-F TGCACCACTTCATATTTCCA versus GATA23F05-F ATGGTATTAGGAGATGGGGC

Matches = 13

Score = 7

GCNCCANNTCNTANTNCCA

est. tm = less than zero

DeltaG @37 degrees = -0.97 kcal/mole

3'-CGGGGTAGAGGATTATGGTA-5'

||x|||xx||x||x|x|||

5'-TGCACCACTTCATATTTCCA-3'

ATA34E08N-F TGCACCACTTCATATTTCCA versus AGAT144-R ATCCCAGATGGAAACATGGA

Matches = 10

Score = 8

TNCATNTTTCCA

est. tm = 1.2 oC

DeltaG @37 degrees = -2.73 kcal/mole

3'-AGGTACAAAGGTAGACCCTA-5'

|x|||x||||||

5'-TGCACCACTTCATATTTCCA-3'

GATA30D09N-R AGCCTCTGTGCAGATCCTC versus ATA1B07-F GGACAGATGCTTCCAGAAAA

Matches = 9

Score = 7

GNACAGANGCT

est. tm = 0.9 oC

DeltaG @37 degrees = -3.14 kcal/mole

5'-GGACAGATGCTTCCAGAAAA-3'

|x|||||x|||

3'-CTCCTAGACGTGTCTCCGA-5'

ATA1B07-F GGACAGATGCTTCCAGAAAA versus GATA11C06N-R AGCGTTTGTGTGTGCATCTGT

Matches = 13

Score = 8

ACAGATGCNNNCANAAAN

est. tm = 23.8 oC

DeltaG @37 degrees = -5.87 kcal/mole

3'-TGTCTACGTGTGTGTTTGCGA-5'

||||||||xxx||x|||x

5'-GGACAGATGCTTCCAGAAAA-3'

ATA9B04N-F ACCCGTAATCTGTCTCTCCC versus GATA23F08-R TATATTTCTTGGGAAAGATAGATGG

Matches = 11

Score = 7

NNATCTNTCTNTCCC

est. tm = 13.3 oC

DeltaG @37 degrees = -4.26 kcal/mole

3'-GGTAGATAGAAAGGGTTCTTTATAT-5'

xx||||x|||x||||

5'-ACCCGTAATCTGTCTCTCCC-3'

ATA9B04N-F ACCCGTAATCTGTCTCTCCC versus GGAA22G01-F ACAAAAGCTGGCAAAGACAG

Matches = 9

Score = 7

CTGTCTNTNCC

est. tm = less than zero

DeltaG @37 degrees = -2.80 kcal/mole

3'-GACAGAAACGGTCGAAAACA-5'

||||||x|x||

5'-ACCCGTAATCTGTCTCTCCC-3'

ATA9B04N-F ACCCGTAATCTGTCTCTCCC versus GATA63A03N-F GTGGATAGACACATGACAGATAGG

Matches = 14

Score = 8

NGGANAGACANATNACNGNT

est. tm = 2.8 oC

DeltaG @37 degrees = -1.93 kcal/mole

5'-GTGGATAGACACATGACAGATAGG-3'

x|||x|||||x||x||x|x|

3'-CCCTCTCTGTCTAATGCCCA-5'

ATA9B04N-F ACCCGTAATCTGTCTCTCCC versus MFD466-TTA001-R GCCTGGGCAAAGAGAGAGTA

Matches = 11

Score = 7

TANTCTNTCTNTNCC

est. tm = less than zero

DeltaG @37 degrees = greater than zero

3'-ATGAGAGAGAAACGGGTCCG-5'

||x|||x|||x|x||

5'-ACCCGTAATCTGTCTCTCCC-3'

GATA12F04-F AGCCATCTGGGCTTAGAGAT versus TTTA028-R GGCACCTTTAATCCCAGCTA

Matches = 12

Score = 7

NANCTGGGNTTANAGNT

est. tm = less than zero

DeltaG @37 degrees = -1.49 kcal/mole

3'-ATCGACCCTAATTTCCACGG-5'

x|x|||||x|||x||x|

5'-AGCCATCTGGGCTTAGAGAT-3'

GATA12F04-F AGCCATCTGGGCTTAGAGAT versus GATA134B03-R GCTGCTTCCCTAAACCTAGA

Matches = 11

Score = 7

TCTNGGNTTAGNGAN

est. tm = less than zero

DeltaG @37 degrees = -2.19 kcal/mole

3'-AGATCCAAATCCCTTCGTCG-5'

|||x||x||||x||x

5'-AGCCATCTGGGCTTAGAGAT-3'

GATA12F04-F AGCCATCTGGGCTTAGAGAT versus AGAT144-R ATCCCAGATGGAAACATGGA

Matches = 10

Score = 7

ANCCCAGATGGNN

est. tm = 22.6 oC

DeltaG @37 degrees = -6.39 kcal/mole

5'-ATCCCAGATGGAAACATGGA-3'

|x|||||||||xx

3'-TAGAGATTCGGGTCTACCGA-5'

GATA90D07N-F CTGAGGTGGGAGGATCAGTT versus AATA058-F CCCATCTCAGGAAGGGAAAC

Matches = 9

Score = 8

CCCANCTCAG

est. tm = 16.1 oC

DeltaG @37 degrees = -5.31 kcal/mole

5'-CCCATCTCAGGAAGGGAAAC-3'

||||x|||||

3'-TTGACTAGGAGGGTGGAGTC-5'

GATA90D07N-F CTGAGGTGGGAGGATCAGTT versus ATA12D05-R CACCTCAGCCTCTTTGGTAG

Matches = 8

Score = 8

CACCTCAG

est. tm = 19.2 oC

DeltaG @37 degrees = -5.90 kcal/mole

5'-CACCTCAGCCTCTTTGGTAG-3'

||||||||

3'-TTGACTAGGAGGGTGGAGTC-5'

GATA12F04-R TATAGGCACATGCCACTGTG versus GATA28D01-F AGTAGAGAACAAAACACTGTGGC

Matches = 8

Score = 7

GCCACNGTG

est. tm = 12.6 oC

DeltaG @37 degrees = -5.02 kcal/mole

3'-CGGTGTCACAAAACAAGAGATGA-5'

|||||x|||

5'-TATAGGCACATGCCACTGTG-3'

GATA28D01-F AGTAGAGAACAAAACACTGTGGC versus GGAA3C07-R TTCTCTACATATTTACTGCCAACA

Matches = 8

Score = 7

TTCTCTACN

est. tm = 12.0 oC

DeltaG @37 degrees = -4.70 kcal/mole

5'-TTCTCTACATATTTACTGCCAACA-3'

||||||||x

3'-CGGTGTCACAAAACAAGAGATGA-5'

GATA23E06-F AGCCATCAACTAGCTTTCCC versus GATA23F08-R TATATTTCTTGGGAAAGATAGATGG

Matches = 12

Score = 9

NCANCTANCTTTCCC

est. tm = 19.7 oC

DeltaG @37 degrees = -5.24 kcal/mole

3'-GGTAGATAGAAAGGGTTCTTTATAT-5'

x||x|||x|||||||

5'-AGCCATCAACTAGCTTTCCC-3'

GATA23E06-F AGCCATCAACTAGCTTTCCC versus GATA21C12-R CCCATTGGAAACAGAGTTGA

Matches = 11

Score = 7

TCAACTNNNTTTCCN

est. tm = 19.6 oC

DeltaG @37 degrees = -5.25 kcal/mole

3'-AGTTGAGACAAAGGTTACCC-5'

||||||xxx|||||x

5'-AGCCATCAACTAGCTTTCCC-3'

GATA117D01N-F TATCCTATGGAAGCCATCA versus AAT269-F GTCGAATGATGGCTTTCCTG

Matches = 11

Score = 8

NANGNAAGCCATCA

est. tm = 18.0 oC

DeltaG @37 degrees = -5.30 kcal/mole

3'-GTCCTTTCGGTAGTAAGCTG-5'

x|x|x|||||||||

5'-TATCCTATGGAAGCCATCA-3'

GATA117D01N-F TATCCTATGGAAGCCATCA versus ATA22E01-R AGGACTGTAGGATTCCAAAGG

Matches = 12

Score = 8

CCTNTGGAANCCNNCA

est. tm = 11.5 oC

DeltaG @37 degrees = -3.92 kcal/mole

3'-GGAAACCTTAGGATGTCAGGA-5'

|||x|||||x||xx||

5'-TATCCTATGGAAGCCATCA-3'

GATA117D01N-F TATCCTATGGAAGCCATCA versus GATA6A05-F CTGCCAGAGAATAGGGTGAA

Matches = 10

Score = 7

CTNCCANAGNATA

est. tm = less than 0 oC

DeltaG @37 degrees = -0.47 kcal/mole

5'-CTGCCAGAGAATAGGGTGAA-3'

||x|||x||x|||

3'-ACTACCGAAGGTATCCTAT-5'

AAC040Z-F ACACGGTGAAACCCTGTCTC versus AAC040Z-F ACACGGTGAAACCCTGTCTC

Matches = 12

Score = 7

ACANGGTNNNACCNTGT

est. tm = 9.6 oC

DeltaG @37 degrees = -3.55 kcal/mole

5'-ACACGGTGAAACCCTGTCTC-3'

|||x|||xxx|||x|||

3'-CTCTGTCCCAAAGTGGCACA-5'

AAC040Z-F ACACGGTGAAACCCTGTCTC versus GATA64A09-R CAGAGTGAGACCCTGTTTCA

Matches = 11

Score = 8

TGAAACNNNGTCTC

est. tm = 16.8 oC

DeltaG @37 degrees = -4.49 kcal/mole

3'-ACTTTGTCCCAGAGTGAGAC-5'

||||||xxx|||||

5'-ACACGGTGAAACCCTGTCTC-3'

GGAA3A07Z-F TCCCATGCCAAAATTCTTAG versus UT5029-F GTTTGGTATTGGAGTTTTCAG

Matches = 10

Score = 7

NTTTGGNATNGGA

est. tm = 5.4 oC

DeltaG @37 degrees = -3.45 kcal/mole

5'-GTTTGGTATTGGAGTTTTCAG-3'

x|||||x||x|||

3'-GATTCTTAAAACCGTACCCT-5'

GATA66B04-F ATGCCCTCTTCTGTCTCTCC versus GATA26D02N-F ATAGACAGGATGGATAGATAGACG

Matches = 10

Score = 7

CNTCTNTCTNTCC

est. tm = less than zero

DeltaG @37 degrees = -1.55 kcal/mole

3'-GCAGATAGATAGGTAGGACAGATA-5'

|x|||x|||x|||

5'-ATGCCCTCTTCTGTCTCTCC-3'

GATA124E07-F CCAGCCTGGCTGTTAGAGTA versus GATA26D02N-F ATAGACAGGATGGATAGATAGACG

Matches = 10

Score = 7

ANAGNCAGGNTGG

est. tm = less than 0 oC

DeltaG @37 degrees = -2.29 kcal/mole

5'-ATAGACAGGATGGATAGATAGACG-3'

|x||x||||x|||

3'-ATGAGATTGTCGGTCCGACC-5'

ATA5A09N-R CACCCCACGTCTAGCTATAG versus GATA26D02N-F ATAGACAGGATGGATAGATAGACG

Matches = 10

Score = 7

CGTCTANCTATNN

est. tm = 13.4 oC

DeltaG @37 degrees = -4.14 kcal/mole

3'-GCAGATAGATAGGTAGGACAGATA-5'

||||||x||||xx

5'-CACCCCACGTCTAGCTATAG-3'

GATA26D02N-F ATAGACAGGATGGATAGATAGACG versus GATA188F04-F AACAGAACCAATAGGCTATCTATC

Matches = 10

Score = 8

GATAGATAGNCN

est. tm = 9.0 oC

DeltaG @37 degrees = -3.39 kcal/mole

3'-CTATCTATCGGATAACCAAGACAA-5'

|||||||||x|x

5'-ATAGACAGGATGGATAGATAGACG-3'

GATA26D02N-F ATAGACAGGATGGATAGATAGACG versus GATA22G05-R AAAACAAATATGGCTCTATCTATCG

Matches = 10

Score = 7

NGATAGATAGANN

est. tm = 18.3 oC

DeltaG @37 degrees = -4.99 kcal/mole

3'-GCTATCTATCTCGGTATAAACAAAA-5'

x||||||||||xx

5'-ATAGACAGGATGGATAGATAGACG-3'

GATA26D02N-F ATAGACAGGATGGATAGATAGACG versus GATA129D11N-R TAGTACTCTACCATCCATCTATCCC

Matches = 11

Score = 8

NGGATAGATNGANG

est. tm = 8.8 oC

DeltaG @37 degrees = -3.29 kcal/mole

3'-CCCTATCTACCTACCATCTCATGAT-5'

x||||||||x||x|

5'-ATAGACAGGATGGATAGATAGACG-3'

GATA26D02N-F ATAGACAGGATGGATAGATAGACG versus AGAT120-R TTGTCTGTCATCTATCTACCCATC

Matches = 14

Score = 12

GATGGNTAGATAGANG

est. tm = 23.4 oC

DeltaG @37 degrees = -5.50 kcal/mole

3'-CTACCCATCTATCTACTGTCTGTT-5'

|||||x||||||||x|

5'-ATAGACAGGATGGATAGATAGACG-3'

GATA21F03-R CCTGCCTGCCTATCTATCTG versus GATA26D02N-F ATAGACAGGATGGATAGATAGACG

Matches = 10

Score = 7

ATAGNCAGGNNGG

est. tm = less than 0 oC

DeltaG @37 degrees = -2.30 kcal/mole

5'-ATAGACAGGATGGATAGATAGACG-3'

||||x||||xx||

3'-GTCTATCTATCCGTCCGTCC-5'

GATA85A04N-F CCTCACACAATGTTGTAAGGG versus GATA85A04N-F CCTCACACAATGTTGTAAGGG

Matches = 14

Score = 8

CCTNACANNATNNTGTNAGG

est. tm = 11.0 oC

DeltaG @37 degrees = -2.96 kcal/mole

5'-CCTCACACAATGTTGTAAGGG-3'

|||x|||xx||xx|||x|||

3'-GGGAATGTTGTAACACACTCC-5'

GATA104-F CCTCCATAATTGTGTGAGCC versus GATA85A04N-F CCTCACACAATGTTGTAAGGG

Matches = 14

Score = 9

NCTCACACAATNNTGNANG

est. tm = 20.6 oC

DeltaG @37 degrees = -4.92 kcal/mole

5'-CCTCACACAATGTTGTAAGGG-3'

x||||||||||xx||x|x|

3'-CCGAGTGTGTTAATACCTCC-5'

TCTA015-F GAATTGTGTGAGCCGGTTTC versus GATA85A04N-F CCTCACACAATGTTGTAAGGG

Matches = 10

Score = 7

NCTCACACAATNN

est. tm = 28.5 oC

DeltaG @37 degrees = -7.32 kcal/mole

5'-CCTCACACAATGTTGTAAGGG-3'

x||||||||||xx

3'-CTTTGGCCGAGTGTGTTAAG-5'

ATA19H08-R GCATTGTGGGATGAGGTATG versus GATA85A04N-F CCTCACACAATGTTGTAAGGG

Matches = 10

Score = 7

CNTCNCACAATGN

est. tm = 8.2 oC

DeltaG @37 degrees = -3.61 kcal/mole

5'-CCTCACACAATGTTGTAAGGG-3'

|x||x|||||||x

3'-GTATGGAGTAGGGTGTTACG-5'

GATA85A04N-F CCTCACACAATGTTGTAAGGG versus AAT107-R CATTCTGAGAGGAAGGCAGAA

Matches = 10

Score = 8

CATTNTGNGAGG

est. tm = 5.4 oC

DeltaG @37 degrees = -3.12 kcal/mole

5'-CATTCTGAGAGGAAGGCAGAA-3'

||||x||x||||

3'-GGGAATGTTGTAACACACTCC-5'

GATA32F05-F ATTTCACGTACTTGGCAAGC versus AGAT060-R TACCATGCCAAGGACATCAA

Matches = 13

Score = 8

TTNANGTNCTTGGCANGN

est. tm = 12.8 oC

DeltaG @37 degrees = -4.06 kcal/mole

3'-AACTACAGGAACCGTACCAT-5'

||x|x||x|||||||x|x

5'-ATTTCACGTACTTGGCAAGC-3'

GATA32F05-F ATTTCACGTACTTGGCAAGC versus GATA68F07-F ATTGCTTCCCCTTTACCTGA

Matches = 12

Score = 7

TCANGTANNNGGNAAGC

est. tm = 5.4 oC

DeltaG @37 degrees = -2.40 kcal/mole

3'-AGTCCATTTCCCCTTCGTTA-5'

|||x|||xxx||x||||

5'-ATTTCACGTACTTGGCAAGC-3'

GATA32F05-F ATTTCACGTACTTGGCAAGC versus GATA89G08Z-R AAGCATGTGAAAGGCATTGT

Matches = 10

Score = 7

AAGNANGTGAAAN

est. tm = 4.3 oC

DeltaG @37 degrees = -3.07 kcal/mole

5'-AAGCATGTGAAAGGCATTGT-3'

|||x|x||||||x

3'-CGAACGGTTCATGCACTTTA-5'

AAAAT002-F AGGTTGCAGTGAGCCAAGAT versus ATA10H11-F GGTGACAGAGACTCTTGTCTCA

Matches = 9

Score = 7

TGAGNCAAGAN

est. tm = 12.0 oC

DeltaG @37 degrees = -4.61 kcal/mole

3'-ACTCTGTTCTCAGAGACAGTGG-5'

||||x|||||x

5'-AGGTTGCAGTGAGCCAAGAT-3'

AAAAT002-F AGGTTGCAGTGAGCCAAGAT versus GATA70E01-F CCCACTACAACTTCAGGTAGA

Matches = 10

Score = 7

CNCACTNCAACNT

est. tm = less than 0 oC

DeltaG @37 degrees = -1.27 kcal/mole

5'-CCCACTACAACTTCAGGTAGA-3'

|x||||x||||x|

3'-TAGAACCGAGTGACGTTGGA-5'

AAAAT002-F AGGTTGCAGTGAGCCAAGAT versus GATA22F11NZ-R TCTCTCTTGCTCCACTGCAA

Matches = 13

Score = 9

TTGCAGTGNNNCAAGAN

est. tm = 33.7 oC

DeltaG @37 degrees = -8.43 kcal/mole

3'-AACGTCACCTCGTTCTCTCT-5'

||||||||xxx|||||x

5'-AGGTTGCAGTGAGCCAAGAT-3'

AAAAT002-F AGGTTGCAGTGAGCCAAGAT versus AATA036-R ACTGACTGCAGCCTTGACCT

Matches = 11

Score = 8

NCTNACTGCANCCT

est. tm = 21.8 oC

DeltaG @37 degrees = -6.13 kcal/mole

5'-ACTGACTGCAGCCTTGACCT-3'

x||x||||||x|||

3'-TAGAACCGAGTGACGTTGGA-5'

ATA5A09N-F GTGGGCCACAAAGCAAGACT versus ATA5A09N-F GTGGGCCACAAAGCAAGACT

Matches = 8

Score = 7

GTGGNCCAC

est. tm = 9.7 oC

DeltaG @37 degrees = -4.61 kcal/mole

5'-GTGGGCCACAAAGCAAGACT-3'

||||x||||

3'-TCAGAACGAAACACCGGGTG-5'

ATA5A09N-F GTGGGCCACAAAGCAAGACT versus GATA178G09-R TCTTAGTTTATGGGCCACCA

Matches = 14

Score = 10

TCTTNNTTTNTGGNCCAC

est. tm = 20.4 oC

DeltaG @37 degrees = -5.01 kcal/mole

5'-TCTTAGTTTATGGGCCACCA-3'

||||xx|||x|||x||||

3'-TCAGAACGAAACACCGGGTG-5'

ATA5A09N-F GTGGGCCACAAAGCAAGACT versus GATA30G01-R AATGAGGTCTTACTTTGTTGCC

Matches = 14

Score = 11

GGCNACAAAGNAAGACN

est. tm = 35.1 oC

DeltaG @37 degrees = -8.81 kcal/mole

3'-CCGTTGTTTCATTCTGGAGTAA-5'

|||x||||||x|||||x

5'-GTGGGCCACAAAGCAAGACT-3'

GATA64F08-F AGGGATCTTCAGAGAAACAGG versus GATA124C08N-R ATGTGTGTGCATCTGTCTCTCTCA

Matches = 10

Score = 7

TNAGAGANACAGN

est. tm = 8.4 oC

DeltaG @37 degrees = -3.92 kcal/mole

3'-ACTCTCTCTGTCTACGTGTGTGTA-5'

|x|||||x||||x

5'-AGGGATCTTCAGAGAAACAGG-3'

GATA64F08-F AGGGATCTTCAGAGAAACAGG versus GATA11A11-R TCTGGAAAACCCTAATTCTCC

Matches = 10

Score = 7

TCTGNANANCCCT

est. tm = less than 0 oC

DeltaG @37 degrees = -2.09 kcal/mole

5'-TCTGGAAAACCCTAATTCTCC-3'

||||x|x|x||||

3'-GGACAAAGAGACTTCTAGGGA-5'

GATA64A09-R CAGAGTGAGACCCTGTTTCA versus GATA64F08-F AGGGATCTTCAGAGAAACAGG

Matches = 8

Score = 7

CCTGTTTCN

est. tm = 18.9 oC

DeltaG @37 degrees = -5.87 kcal/mole

3'-GGACAAAGAGACTTCTAGGGA-5'

||||||||x

5'-CAGAGTGAGACCCTGTTTCA-3'

GATA64F08-F AGGGATCTTCAGAGAAACAGG versus GATA28D01-R TTTGAAGATCTGTGAAATGTGC

Matches = 10

Score = 7

TNTGAAGATCNNT

est. tm = less than 0 oC

DeltaG @37 degrees = -1.66 kcal/mole

5'-TTTGAAGATCTGTGAAATGTGC-3'

|x||||||||xx|

3'-GGACAAAGAGACTTCTAGGGA-5'

GATA84E11-R CACACATGCTGTGTCTCTCA versus GATA64F08-F AGGGATCTTCAGAGAAACAGG

Matches = 10

Score = 7

NCTGTNTCTCTNA

est. tm = 6.3 oC

DeltaG @37 degrees = -3.52 kcal/mole

3'-GGACAAAGAGACTTCTAGGGA-5'

x||||x|||||x|

5'-CACACATGCTGTGTCTCTCA-3'

GATA137H02N-R TCTGAGGATTCCTCCTTCCT versus GATA64F08-F AGGGATCTTCAGAGAAACAGG

Matches = 11

Score = 9

AGGNATCNTCAGA

est. tm = 11.7 oC

DeltaG @37 degrees = -4.16 kcal/mole

5'-AGGGATCTTCAGAGAAACAGG-3'

|||x|||x|||||

3'-TCCTTCCTCCTTAGGAGTCT-5'

AGAT060-F CATGTAAGATTTTGCTGCCAGA versus GATA43H03N-F GGCATAAAAATAGTACAGCAAGC

Matches = 13

Score = 7

GGCANNAAAATNNTACANN

est. tm = 19.5 oC

DeltaG @37 degrees = -4.63 kcal/mole

5'-GGCATAAAAATAGTACAGCAAGC-3'

||||xx|||||xx||||xx

3'-AGACCGTCGTTTTAGAATGTAC-5'

GATA43H03N-F GGCATAAAAATAGTACAGCAAGC versus GATA72E05-R AATCAGTGCTTTCTGTACTATTGG

Matches = 14

Score = 11

NNAATAGTACAGNAAGC

est. tm = 31.3 oC

DeltaG @37 degrees = -7.60 kcal/mole

3'-GGTTATCATGTCTTTCGTGACTAA-5'

xx||||||||||x||||

5'-GGCATAAAAATAGTACAGCAAGC-3'

GATA51B02-F CATGGATGCAGAATTCACAG versus GATA28D01-R TTTGAAGATCTGTGAAATGTGC

Matches = 11

Score = 9

GCANANTTCACAG

est. tm = 19.1 oC

DeltaG @37 degrees = -5.29 kcal/mole

3'-CGTGTAAAGTGTCTAGAAGTTT-5'

|||x|x|||||||

5'-CATGGATGCAGAATTCACAG-3'

GATA51B02-F CATGGATGCAGAATTCACAG versus GATA6B09-F TTGCATCCATACGGAAAGTC

Matches = 9

Score = 7

NTGCATCCATN

est. tm = 30.7 oC

DeltaG @37 degrees = -8.00 kcal/mole

5'-TTGCATCCATACGGAAAGTC-3'

x|||||||||x

3'-GACACTTAAGACGTAGGTAC-5'

GATA51B02-F CATGGATGCAGAATTCACAG versus GATA64H04-R TCTTCATACATGCTTTATCATGC

Matches = 10

Score = 8

TCTNCATNCATG

est. tm = 1.5 oC

DeltaG @37 degrees = -2.55 kcal/mole

5'-TCTTCATACATGCTTTATCATGC-3'

|||x|||x||||

3'-GACACTTAAGACGTAGGTAC-5'

AGAT113Z-F GGCTCCTGAAAGATTAAAGAAGG versus ATA77F05-F GTTTTTACCTTCATGAATCTCTCC

Matches = 13

Score = 9

NGANAGATTNANGAAGG

est. tm = 14.4 oC

DeltaG @37 degrees = -3.90 kcal/mole

3'-CCTCTCTAAGTACTTCCATTTTTG-5'

x||x|||||x|x|||||

5'-GGCTCCTGAAAGATTAAAGAAGG-3'

ATA77F05-F GTTTTTACCTTCATGAATCTCTCC versus GATA28D11-R TAAAAAGAATGAAGGTAAAAATGTG

Matches = 15

Score = 8

NNANANNNATGAAGGTAAAAAN

est. tm = 23.9 oC

DeltaG @37 degrees = -5.29 kcal/mole

5'-TAAAAAGAATGAAGGTAAAAATGTG-3'

xx|x|xxx|||||||||||||x

3'-CCTCTCTAAGTACTTCCATTTTTG-5'

ATA29G03Z-F TTTAACTTACTGGCGCAGAT versus GATA193A07-F AGTCAGTCAAAGGCCTGATG

Matches = 9

Score = 7

AGTNAGTNAAA

est. tm = less than 0 oC

DeltaG @37 degrees = -1.56 kcal/mole

5'-AGTCAGTCAAAGGCCTGATG-3'

|||x|||x|||

3'-TAGACGCGGTCATTCAATTT-5'

GGAA30H04-F ATTCTTCTCCCAAGAATGCC versus GGAA30H04-F ATTCTTCTCCCAAGAATGCC

Matches = 12

Score = 7

ATTCTTNNNNNAAGAAT

est. tm = 8.6 oC

DeltaG @37 degrees = -2.17 kcal/mole

5'-ATTCTTCTCCCAAGAATGCC-3'

||||||xxxxx||||||

3'-CCGTAAGAACCCTCTTCTTA-5'

GGAA30H04-F ATTCTTCTCCCAAGAATGCC versus ATA55A11N-F AGAAGAATCACTTGGACCCA

Matches = 8

Score = 8

AGAAGAAT

est. tm = 6.1 oC

DeltaG @37 degrees = -3.80 kcal/mole

5'-AGAAGAATCACTTGGACCCA-3'

||||||||

3'-CCGTAAGAACCCTCTTCTTA-5'

GGAA30H04-F ATTCTTCTCCCAAGAATGCC versus AAAAC001-R CCTTTGGAGAAAACTGAACTCG

Matches = 11

Score = 7

NCTTNGGAGAANANT

est. tm = less than 0 oC

DeltaG @37 degrees = -2.21 kcal/mole

5'-CCTTTGGAGAAAACTGAACTCG-3'

x|||x||||||x|x|

3'-CCGTAAGAACCCTCTTCTTA-5'

GGAA30H04-F ATTCTTCTCCCAAGAATGCC versus GACAG001-R GGGGGAAGTATTTGCAGTCA

Matches = 9

Score = 7

GGGNGAAGNAT

est. tm = less than 0 oC

DeltaG @37 degrees = -2.25 kcal/mole

5'-GGGGGAAGTATTTGCAGTCA-3'

|||x||||x||

3'-CCGTAAGAACCCTCTTCTTA-5'

GGAA30H04-F ATTCTTCTCCCAAGAATGCC versus ATA19H08-R GCATTGTGGGATGAGGTATG

Matches = 13

Score = 7

GCATTNTNGGNNGANGNAT

est. tm = less than 0 oC

DeltaG @37 degrees = > 0 kcal/mole

5'-GCATTGTGGGATGAGGTATG-3'

|||||x|x||xx||x|x||

3'-CCGTAAGAACCCTCTTCTTA-5'

GATA193A07-F AGTCAGTCAAAGGCCTGATG versus GATA64G07-R AGACTTGGACTGAATTACACTGC

Matches = 11

Score = 7

NGNCTTNGACTGANT

est. tm = 0.4 oC

DeltaG @37 degrees = -2.28 kcal/mole

5'-AGACTTGGACTGAATTACACTGC-3'

x|x|||x||||||x|

3'-GTAGTCCGGAAACTGACTGA-5'

GATA193A07-F AGTCAGTCAAAGGCCTGATG versus GATA87E02N-R TTGATTGACTGCACTTTTCA

Matches = 9

Score = 8

TTGANTGACT

est. tm = 8.4 oC

DeltaG @37 degrees = -4.03 kcal/mole

5'-TTGATTGACTGCACTTTTCA-3'

||||x|||||

3'-GTAGTCCGGAAACTGACTGA-5'

GATA193A07-F AGTCAGTCAAAGGCCTGATG versus ATGG002-R CCTACCTTCTCCAGGCCTTT

Matches = 10

Score = 8

AAAGGCCTGNNG

est. tm = 20.2 oC

DeltaG @37 degrees = -5.78 kcal/mole

3'-TTTCCGGACCTCTTCCATCC-5'

|||||||||xx|

5'-AGTCAGTCAAAGGCCTGATG-3'

GATA193A07-F AGTCAGTCAAAGGCCTGATG versus AATA036-R ACTGACTGCAGCCTTGACCT

Matches = 7

Score = 7

ACTGACT

est. tm = 4.9 oC

DeltaG @37 degrees = -4.23 kcal/mole

5'-ACTGACTGCAGCCTTGACCT-3'

|||||||

3'-GTAGTCCGGAAACTGACTGA-5'

GATA168F06-F ACAATTCCAGAAACTTCCCC versus GATA73D10N-R AGTAAATGGAATTGCTTGTTACC

Matches = 11

Score = 7

AGTNNNTGGAATTGN

est. tm = 19.5 oC

DeltaG @37 degrees = -5.25 kcal/mole

5'-AGTAAATGGAATTGCTTGTTACC-3'

|||xxx||||||||x

3'-CCCCTTCAAAGACCTTAACA-5'

GATA168F06-F ACAATTCCAGAAACTTCCCC versus TCTA015-F GAATTGTGTGAGCCGGTTTC

Matches = 7

Score = 7

GAATTGT

est. tm = less than 0 oC

DeltaG @37 degrees = -3.16 kcal/mole

5'-GAATTGTGTGAGCCGGTTTC-3'

|||||||

3'-CCCCTTCAAAGACCTTAACA-5'

GATA168F06-F ACAATTCCAGAAACTTCCCC versus GACAG001-R GGGGGAAGTATTTGCAGTCA

Matches = 13

Score = 7

NNANTNCANANACTTCCCC

est. tm = 9.5 oC

DeltaG @37 degrees = -3.30 kcal/mole

3'-ACTGACGTTTATGAAGGGGG-5'

xx|x|x||x|x||||||||

5'-ACAATTCCAGAAACTTCCCC-3'

GATA168F06-F ACAATTCCAGAAACTTCCCC versus GATA71C09-R TTGAATTGTTCTGGTACCTCTG

Matches = 8

Score = 7

TNGAATTGT

est. tm = less than 0 oC

DeltaG @37 degrees = -2.14 kcal/mole

5'-TTGAATTGTTCTGGTACCTCTG-3'

|x|||||||

3'-CCCCTTCAAAGACCTTAACA-5'

ATA43A10Z-F AAGCACAGAACTGTTTGGG versus ATT198z-F CGTTTCTGTGCCTTAGTTTGC

Matches = 10

Score = 7

CNNTTCTGTGCNT

est. tm = 6.7 oC

DeltaG @37 degrees = -3.37 kcal/mole

5'-CGTTTCTGTGCCTTAGTTTGC-3'

|xx||||||||x|

3'-GGGTTTGTCAAGACACGAA-5'

ATT198z-F CGTTTCTGTGCCTTAGTTTGC versus ATA47D07-R TCAGATGACAGACAAACTCAGG

Matches = 9

Score = 7

CCTNAGTTTGN

est. tm = 13.9 oC

DeltaG @37 degrees = -4.88 kcal/mole

3'-GGACTCAAACAGACAGTAGACT-5'

|||x||||||x

5'-CGTTTCTGTGCCTTAGTTTGC-3'

ATT198z-F CGTTTCTGTGCCTTAGTTTGC versus ATA6C09-R AAAACTCAAGCTCAGAAAGGC

Matches = 15

Score = 10

NAAACTNANGCNCAGAAANG

est. tm = 19.2 oC

DeltaG @37 degrees = -4.50 kcal/mole

5'-AAAACTCAAGCTCAGAAAGGC-3'

x|||||x|x||x||||||x|

3'-CGTTTGATTCCGTGTCTTTGC-5'

ATT198z-F CGTTTCTGTGCCTTAGTTTGC versus ATA29C03-R GCACAGAAACAGGAAGTATGC

Matches = 10

Score = 9

GCACAGAAACN

est. tm = 34.0 oC

DeltaG @37 degrees = -8.62 kcal/mole

5'-GCACAGAAACAGGAAGTATGC-3'

||||||||||x

3'-CGTTTGATTCCGTGTCTTTGC-5'

ATT198z-F CGTTTCTGTGCCTTAGTTTGC versus GATA42A03-R TGTTATAGCAGCAATAGAAAACTAA

Matches = 8

Score = 7

TTAGTTTNC

est. tm = less than zero

DeltaG @37 degrees = -1.45 kcal/mole

3'-AATCAAAAGATAACGACGATATTGT-5'

|||||||x|

5'-CGTTTCTGTGCCTTAGTTTGC-3'

GATA21C12-F AAACAATCAAAGGCCCAGG versus ATT198z-F CGTTTCTGTGCCTTAGTTTGC

Matches = 12

Score = 7

NCAANCNAAGGCNCAGN

est. tm = 18.2 oC

DeltaG @37 degrees = -5.20 kcal/mole

3'-CGTTTGATTCCGTGTCTTTGC-5'

x|||x|x|||||x|||x

5'-AAACAATCAAAGGCCCAGG-3'

ATA6C09-R AAAACTCAAGCTCAGAAAGGC versus GATA88H02N-F TGAGTTTTTCCTATTGAGAGTCC

Matches = 8

Score = 8

TGAGTTTT

est. tm = 9.2 oC

DeltaG @37 degrees = -4.25 kcal/mole

5'-TGAGTTTTTCCTATTGAGAGTCC-3'

||||||||

3'-CGGAAAGACTCGAACTCAAAA-5'

GATA47F05-R AACAGCAAAAAGACACACAGC versus GATA88H02N-F TGAGTTTTTCCTATTGAGAGTCC

Matches = 11

Score = 7

TGNNTTTTTNCTNTT

est. tm = less than 0 oC

DeltaG @37 degrees = > 0 kcal/mole

5'-TGAGTTTTTCCTATTGAGAGTCC-3'

||xx|||||x||x||

3'-CGACACACAGAAAAACGACAA-5'

GATA50G06-F ATACCTGGAGTCCTTGGTCC versus GGAA8G07-R CCCTGGACTCATGGTACTTG

Matches = 12

Score = 7

CCNNGGACTCNNGGTAN

est. tm = 21.1 oC

DeltaG @37 degrees = -5.55 kcal/mole

5'-CCCTGGACTCATGGTACTTG-3'

||xx||||||xx||||x

3'-CCTGGTTCCTGAGGTCCATA-5'

GATA85D02-F TGTGCATCCTCTATGTCCCT versus GGAT3H10-F GGATGGATGGACATAATGGA

Matches = 11

Score = 8

TCCNNTATGTCCNT

est. tm = 8.3 oC

DeltaG @37 degrees = -3.47 kcal/mole

3'-AGGTAATACAGGTAGGTAGG-5'

|||xx|||||||x|

5'-TGTGCATCCTCTATGTCCCT-3'

ATA24A08-F GCAGCACTTGGCAAATACTC versus sRA-R CCTTGTCAGCGTTTATTTGCC

Matches = 9

Score = 7

GGCAAATANNC

est. tm = 5.9 oC

DeltaG @37 degrees = -3.18 kcal/mole

3'-CCGTTTATTTGCGACTGTTCC-5'

||||||||xx|

5'-GCAGCACTTGGCAAATACTC-3'

GATA197B10-F AGGAAAGAAACAAGTGGGCT versus GATA66B04-F ATGCCCTCTTCTGTCTCTCC

Matches = 14

Score = 9

GGANAGANANAAGNGGGCN

est. tm = 23.2 oC

DeltaG @37 degrees = -6.02 kcal/mole

3'-CCTCTCTGTCTTCTCCCGTA-5'

|||x|||x|x|||x||||x

5'-AGGAAAGAAACAAGTGGGCT-3'

GATA197B10-F AGGAAAGAAACAAGTGGGCT versus GGAA9D03-R TTCTTTCCTTACTAAGTTGAGAACG

Matches = 9

Score = 9

TTCTTTCCT

est. tm = 17.9 oC

DeltaG @37 degrees = -5.49 kcal/mole

5'-TTCTTTCCTTACTAAGTTGAGAACG-3'

|||||||||

3'-TCGGGTGAACAAAGAAAGGA-5'

GATA197B10-F AGGAAAGAAACAAGTGGGCT versus GGAA9D03-R TTCTTTCCTTACTAAGTTGAGAACG

Matches = 10

Score = 7

TTNTTTCNTTNCT

est. tm = less than 0 oC

DeltaG @37 degrees = > 0 kcal/mole

5'-TTCTTTCCTTACTAAGTTGAGAACG-3'

||x||||x||x||

3'-TCGGGTGAACAAAGAAAGGA-5'

GATA197B10-F AGGAAAGAAACAAGTGGGCT versus GATA29B01-F GCGAAGGCCATTAATTTCTT

Matches = 12

Score = 8

AAGAAANNANTGGNCT

est. tm = 2.2 oC

DeltaG @37 degrees = -2.06 kcal/mole

3'-TTCTTTAATTACCGGAAGCG-5'

||||||xx|x|||x||

5'-AGGAAAGAAACAAGTGGGCT-3'

GATA197B10-F AGGAAAGAAACAAGTGGGCT versus GGAA29H03N-R AGTTGACTCTTTCCCCAACTA

Matches = 11

Score = 7

ANTTGNNTCTTTCCN

est. tm = 11.0 oC

DeltaG @37 degrees = -3.80 kcal/mole

5'-AGTTGACTCTTTCCCCAACTA-3'

|x|||xx|||||||x

3'-TCGGGTGAACAAAGAAAGGA-5'

ATA3A07-F GTCTGTAACCTAGGCAGGCA versus GATA44F10-F TTCCAGCCTAGGTAGCAGTG

Matches = 14

Score = 8

TNCCNGCCTAGGTNNCAGNN

est. tm = 25.6 oC

DeltaG @37 degrees = -6.43 kcal/mole

5'-TTCCAGCCTAGGTAGCAGTG-3'

|x||x||||||||xx|||xx

3'-ACGGACGGATCCAATGTCTG-5'

ATA3A07-F GTCTGTAACCTAGGCAGGCA versus GATA44F10-F TTCCAGCCTAGGTAGCAGTG

Matches = 14

Score = 8

NNCTGNNACCTAGGCNGGNA

est. tm = 24.0 oC

DeltaG @37 degrees = -6.03 kcal/mole

3'-GTGACGATGGATCCGACCTT-5'

xx|||xx||||||||x||x|

5'-GTCTGTAACCTAGGCAGGCA-3'

ATA3A07-F GTCTGTAACCTAGGCAGGCA versus GTTTT001-R AGCCTGGGTGACAGAGTGAA

Matches = 12

Score = 8

NGCCTNGGTNACAGAN

est. tm = 33.1 oC

DeltaG @37 degrees = -8.44 kcal/mole

5'-AGCCTGGGTGACAGAGTGAA-3'

x||||x|||x|||||x

3'-ACGGACGGATCCAATGTCTG-5'

ATA3A07-F GTCTGTAACCTAGGCAGGCA versus GATA21F03-R CCTGCCTGCCTATCTATCTG

Matches = 13

Score = 8

CNGNNANNTAGGCAGGCA

est. tm = 19.6 oC

DeltaG @37 degrees = -5.15 kcal/mole

3'-GTCTATCTATCCGTCCGTCC-5'

|x|xx|xx||||||||||

5'-GTCTGTAACCTAGGCAGGCA-3'

ATT001-F GCCATGCAGGAAGGAGTAGA versus GATA66D01-R TAATTCAAATCTTTCCTGTCAGG

Matches = 13

Score = 7

CCNNNCAGGAANGANTNGA

est. tm = 1.5 oC

DeltaG @37 degrees = -1.62 kcal/mole

3'-GGACTGTCCTTTCTAAACTTAAT-5'

||xxx||||||x||x|x||

5'-GCCATGCAGGAAGGAGTAGA-3'

ATT001-F GCCATGCAGGAAGGAGTAGA versus GATA137H02N-R TCTGAGGATTCCTCCTTCCT

Matches = 10

Score = 7

AGGAAGGAGNANN

est. tm = 19.2 oC

DeltaG @37 degrees = -5.67 kcal/mole

3'-TCCTTCCTCCTTAGGAGTCT-5'

|||||||||x|xx

5'-GCCATGCAGGAAGGAGTAGA-3'

GGAA3G05-F CAGGCTGAATGACAGAACAA versus GATA117D01N-R GATTGATCTGTCTGTCCGTC

Matches = 13

Score = 8

GNCNGANNGACAGANCAA

est. tm = 1.9 oC

DeltaG @37 degrees = -1.56 kcal/mole

3'-CTGCCTGTCTGTCTAGTTAG-5'

|x|x||xx||||||x|||

5'-CAGGCTGAATGACAGAACAA-3'

GATA22F09N-F GTTCAAGCATGGGTGGATAG versus GATA73H09N-F CCAGTCTAGACACCCAGGAT

Matches = 11

Score = 7

ANCNTGGGTGNNTAG

est. tm = less than zero

DeltaG @37 degrees = -2.09 kcal/mole

3'-TAGGACCCACAGATCTGACC-5'

|x|x||||||xx|||

5'-GTTCAAGCATGGGTGGATAG-3'

GATA22F09N-F GTTCAAGCATGGGTGGATAG versus GGAT3H10-R CACCTTTTCATCTGTCCACC

Matches = 8

Score = 7

GGTGGANAG

est. tm = 7.5 oC

DeltaG @37 degrees = -4.30 kcal/mole

3'-CCACCTGTCTACTTTTCCAC-5'

||||||x||

5'-GTTCAAGCATGGGTGGATAG-3'

GATA22F09N-F GTTCAAGCATGGGTGGATAG versus GATA14E09-R GTCATAATATCTGCCAATGATTG

Matches = 12

Score = 7

CAANCATNGGNNGATAN

est. tm = 3.8 oC

DeltaG @37 degrees = -2.06 kcal/mole

3'-GTTAGTAACCGTCTATAATACTG-5'

|||x|||x||xx||||x

5'-GTTCAAGCATGGGTGGATAG-3'

GATA22F09N-F GTTCAAGCATGGGTGGATAG versus ATA21A03-R TGCATCCACCTTTGCTATAA

Matches = 13

Score = 7

TTNNAGCANNGGTGGATNN

est. tm = 25.5 oC

DeltaG @37 degrees = -6.38 kcal/mole

3'-AATATCGTTTCCACCTACGT-5'

||xx||||xx|||||||xx

5'-GTTCAAGCATGGGTGGATAG-3'

GATA22F09N-F GTTCAAGCATGGGTGGATAG versus GATA64H04-R TCTTCATACATGCTTTATCATGC

Matches = 13

Score = 7

TNTNCANNCATGCTTNANC

est. tm = less than 0 oC

DeltaG @37 degrees = -0.04 kcal/mole

5'-TCTTCATACATGCTTTATCATGC-3'

|x|x||xx|||||||x|x|

3'-GATAGGTGGGTACGAACTTG-5'

GATA22F09N-F GTTCAAGCATGGGTGGATAG versus AGAT120-R TTGTCTGTCATCTATCTACCCATC

Matches = 11

Score = 9

NATGGGTNGATAG

est. tm = 23.0 oC

DeltaG @37 degrees = -6.08 kcal/mole

3'-CTACCCATCTATCTACTGTCTGTT-5'

x||||||x|||||

5'-GTTCAAGCATGGGTGGATAG-3'

GATA22F09N-F GTTCAAGCATGGGTGGATAG versus GGAT3F08-R TATCCATCCATCCATCAACC

Matches = 15

Score = 11

TATCCANCCATNCNTNAAC

est. tm = 15.4 oC

DeltaG @37 degrees = -3.75 kcal/mole

5'-TATCCATCCATCCATCAACC-3'

||||||x||||x|x|x|||

3'-GATAGGTGGGTACGAACTTG-5'

ATACC001-F ATGTTTCATCCCGAAGGACA versus GATA52A04-F TTTGGGATAAAAGGTATTTTGC

Matches = 11

Score = 7

TTNGGGATNAAANNT

est. tm = less than 0 oC

DeltaG @37 degrees = -1.01 kcal/mole

5'-TTTGGGATAAAAGGTATTTTGC-3'

||x|||||x|||xx|

3'-ACAGGAAGCCCTACTTTGTA-5'

ATACC001-F ATGTTTCATCCCGAAGGACA versus GATA52A04-R TTTGGGATAAAAGGTATTTTGC

Matches = 11

Score = 7

TTNGGGATNAAANNT

est. tm = less than 0 oC

DeltaG @37 degrees = -1.01 kcal/mole

5'-TTTGGGATAAAAGGTATTTTGC-3'

||x|||||x|||xx|

3'-ACAGGAAGCCCTACTTTGTA-5'

GATA158H04-F ACATACAGCACAGGCCAAAT versus ATCC001-F TGCCCTGTATTCTGTGTAGCA

Matches = 12

Score = 7

TGNCCTGTNNTNTNTGT

est. tm = less than 0 oC

DeltaG @37 degrees = -1.56 kcal/mole

5'-TGCCCTGTATTCTGTGTAGCA-3'

||x|||||xx|x|x|||

3'-TAAACCGGACACGACATACA-5'

ATA78D02N-F GGCAAGAGTTTTCCCATTTT versus GATA164A09-R CTCAGTTCAAGGAAATGGGA

Matches = 8

Score = 7

TCCCATTTN

est. tm = 17.4 oC

DeltaG @37 degrees = -5.77 kcal/mole

3'-AGGGTAAAGGAACTTGACTC-5'

||||||||x

5'-GGCAAGAGTTTTCCCATTTT-3'

GGAA9D03-F TGGCATGCAATTGTAGTCTC versus GATA6E05-F ATTGCATGGCAACTCTTCTC

Matches = 10

Score = 9

ATTGCATGNCA

est. tm = 17.5 oC

DeltaG @37 degrees = -5.28 kcal/mole

5'-ATTGCATGGCAACTCTTCTC-3'

||||||||x||

3'-CTCTGATGTTAACGTACGGT-5'

GGAA9D03-F TGGCATGCAATTGTAGTCTC versus GATA131D09-R AGACTGCAGTGAGATGCCAT

Matches = 14

Score = 9

AGACTNCANTNNNATGCCA

est. tm = 21.1 oC

DeltaG @37 degrees = -5.25 kcal/mole

5'-AGACTGCAGTGAGATGCCAT-3'

|||||x||x|xxx||||||

3'-CTCTGATGTTAACGTACGGT-5'

AAT245-F GCCAAGGCAGGAGGATTACT versus TTTA062-F AGCCTCCTACCTTGCCTTCT

Matches = 13

Score = 10

ANCCTCCTNCCTTGNC

est. tm = 20.1 oC

DeltaG @37 degrees = -5.44 kcal/mole

5'-AGCCTCCTACCTTGCCTTCT-3'

|x||||||x|||||x|

3'-TCATTAGGAGGACGGAACCG-5'

AAT245-F GCCAAGGCAGGAGGATTACT versus GATA137H02N-R TCTGAGGATTCCTCCTTCCT

Matches = 13

Score = 10

AGGNAGGAGGANTNCT

est. tm = 19.8 oC

DeltaG @37 degrees = -5.50 kcal/mole

3'-TCCTTCCTCCTTAGGAGTCT-5'

|||x|||||||x|x||

5'-GCCAAGGCAGGAGGATTACT-3'

ATA43A10Z-F AAGCACAGAACTGTTTGGG versus AAT269-R CCCAGTGCCCATACACTTTT

Matches = 10

Score = 7

ANAANTGTNTGGG

est. tm = less than zero

DeltaG @37 degrees = -2.19 kcal/mole

3'-TTTTCACATACCCGTGACCC-5'

|x||x|||x||||

5'-AAGCACAGAACTGTTTGGG-3'

ATA43A10Z-F AAGCACAGAACTGTTTGGG versus GGAT1A4-R ATAGTTTTGTGCTTATTGACATGA

Matches = 12

Score = 10

ANAGTTNTGTGCTT

est. tm = 22.1 oC

DeltaG @37 degrees = -5.86 kcal/mole

5'-ATAGTTTTGTGCTTATTGACATGA-3'

|x||||x|||||||

3'-GGGTTTGTCAAGACACGAA-5'

ATA43A10Z-F AAGCACAGAACTGTTTGGG versus GATA48E02-R CAGATTTCTGCTTTCCCAGA

Matches = 10

Score = 7

CAGNTNTNTGCTT

est. tm = less than 0 oC

DeltaG @37 degrees = -1.89 kcal/mole

5'-CAGATTTCTGCTTTCCCAGA-3'

|||x|x|x|||||

3'-GGGTTTGTCAAGACACGAA-5'

TTCA006-F TCCCCACGTAAGCATTTCTC versus GATA6C01-F TCTAGGATGTTTTTAGAGAAAGGC

Matches = 8

Score = 7

GCNTTTCTC

est. tm = 3.0 oC

DeltaG @37 degrees = -3.31 kcal/mole

3'-CGGAAAGAGATTTTTGTAGGATCT-5'

||x||||||

5'-TCCCCACGTAAGCATTTCTC-3'

TTCA006-F TCCCCACGTAAGCATTTCTC versus GATA49D12N-R AGATAGAGGGAAAGGCATATGTG

Matches = 12

Score = 8

CACNTANGCNTTTCNC

est. tm = less than zero

DeltaG @37 degrees = -1.04 kcal/mole

3'-GTGTATACGGAAAGGGAGATAGA-5'

|||x||x||x||||x|

5'-TCCCCACGTAAGCATTTCTC-3'

ATA5A04N-R TTCAGTCTTGATCTAGTGCTCC versus GATA178F11Z-F TTAAGAATGAAATGATCTAATTCCG

Matches = 9

Score = 7

TNAAGANTGAA

est. tm = less than 0 oC

DeltaG @37 degrees = -1.45 kcal/mole

5'-TTAAGAATGAAATGATCTAATTCCG-3'

|x||||x||||

3'-CCTCGTGATCTAGTTCTGACTT-5'

GGAA2A03-F CCTGGGCAACAGAATAAGAT versus GATA178F11Z-F TTAAGAATGAAATGATCTAATTCCG

Matches = 9

Score = 7

CNGAATNAGAT

est. tm = less than zero

DeltaG @37 degrees = -0.79 kcal/mole

3'-GCCTTAATCTAGTAAAGTAAGAATT-5'

|x||||x||||

5'-CCTGGGCAACAGAATAAGAT-3'

GATA189C06-R GGAAGCCAAATGTTGAATTG versus AGAT060-F CATGTAAGATTTTGCTGCCAGA

Matches = 13

Score = 7

NATNNAANATTTNGCTNCC

est. tm = 1.4 oC

DeltaG @37 degrees = -1.42 kcal/mole

5'-CATGTAAGATTTTGCTGCCAGA-3'

x||xx||x||||x|||x||

3'-GTTAAGTTGTAAACCGAAGG-5'

GATA11A06-F TTTCCAGTGGAAACCAAACT versus GATA11A06-F TTTCCAGTGGAAACCAAACT

Matches = 12

Score = 11

TTTCCANTGGAAA

est. tm = 28.2 oC

DeltaG @37 degrees = -7.15 kcal/mole

5'-TTTCCAGTGGAAACCAAACT-3'

||||||x||||||

3'-TCAAACCAAAGGTGACCTTT-5'

GATA11A06-F TTTCCAGTGGAAACCAAACT versus GATA2A12-F TGTGTTTGGGTTTCCTCTGT

Matches = 12

Score = 7

NCAGNGGAAACCNAANN

est. tm = 22.3 oC

DeltaG @37 degrees = -5.83 kcal/mole

3'-TGTCTCCTTTGGGTTTGTGT-5'

x|||x|||||||x||xx

5'-TTTCCAGTGGAAACCAAACT-3'

GATA11A06-F TTTCCAGTGGAAACCAAACT versus GATA4H03-R TCCAATGGAAAGAAATGGAG

Matches = 10

Score = 9

TCCANTGGAAA

est. tm = 19.1 oC

DeltaG @37 degrees = -5.68 kcal/mole

5'-TCCAATGGAAAGAAATGGAG-3'

||||x||||||

3'-TCAAACCAAAGGTGACCTTT-5'

GATA11A06-F TTTCCAGTGGAAACCAAACT versus GATA2H09-F TTGCCACTGAAAATCATATCC

Matches = 11

Score = 9

TTNCCACTGNAAA

est. tm = 11.4 oC

DeltaG @37 degrees = -4.02 kcal/mole

5'-TTGCCACTGAAAATCATATCC-3'

||x||||||x|||

3'-TCAAACCAAAGGTGACCTTT-5'

GATA11A06-F TTTCCAGTGGAAACCAAACT versus GATA21C12-R CCCATTGGAAACAGAGTTGA

Matches = 9

Score = 7

NCCANTGGAAA

est. tm = 13.7 oC

DeltaG @37 degrees = -5.00 kcal/mole

5'-CCCATTGGAAACAGAGTTGA-3'

x|||x||||||

3'-TCAAACCAAAGGTGACCTTT-5'

GATA13-F TCATGTGACAAAAGCCACAC versus GATA29A05-F TTTTGTTTCTTGATCTGGGC

Matches = 10

Score = 7

TTTTGTNNCNTGA

est. tm = less than 0 oC

DeltaG @37 degrees = -1.82 kcal/mole

5'-TTTTGTTTCTTGATCTGGGC-3'

||||||xx|x|||

3'-CACACCGAAAACAGTGTACT-5'

GATA13-F TCATGTGACAAAAGCCACAC versus GATA165G02N-R CTGTCACAGGACTTTTCAGCC

Matches = 9

Score = 7

NTGTCACANGA

est. tm = 14.4 oC

DeltaG @37 degrees = -4.99 kcal/mole

5'-CTGTCACAGGACTTTTCAGCC-3'

x|||||||x||

3'-CACACCGAAAACAGTGTACT-5'

ATA23G05-F AGCTGGAGAGGGATAGCATT versus GATA23D03N-R ATTCTTTGTCTCCCCAGTTG

Matches = 13

Score = 7

ATNCTNTNNCTCNCCAGNT

est. tm = less than 0 oC

DeltaG @37 degrees = > 0 kcal/mole

5'-ATTCTTTGTCTCCCCAGTTG-3'

||x||x|xx|||x||||x|

3'-TTACGATAGGGAGAGGTCGA-5'

GATA7E12-F TCAAATTTTTAAGTCTCACCAGG versus GATA131D09-F AAAAATCTGACTCTATTCAAATGTT

Matches = 9

Score = 8

AAAAATNTGA

est. tm = less than 0 oC

DeltaG @37 degrees = -2.44 kcal/mole

5'-AAAAATCTGACTCTATTCAAATGTT-3'

||||||x|||

3'-GGACCACTCTGAATTTTTAAACT-5'

GATA74E02Z-R TGAGCCTTTAGACTTGGACCA versus GATA7E12-F TCAAATTTTTAAGTCTCACCAGG

Matches = 13

Score = 8

TCNAANTNTNAAGNCTCA

est. tm = less than 0 oC

DeltaG @37 degrees = > 0 kcal/mole

5'-TCAAATTTTTAAGTCTCACCAGG-3'

||x||x|x|x|||x||||

3'-ACCAGGTTCAGATTTCCGAGT-5'

GATA177C03N-F CTCTCTTCATCCACCATTGG versus UT1355Z-F AGGATGGATAAATAGAACATAGGTAGA

Matches = 12

Score = 7

ANGNTGGATNAANAGAN

est. tm = less than 0 oC

DeltaG @37 degrees = -1.68 kcal/mole

5'-AGGATGGATAAATAGAACATAGGTAGA-3'

|x|x|||||x||x|||x

3'-GGTTACCACCTACTTCTCTC-5'

GATA21G05-F AGGCTGTGGTGAGCTATGAC versus GATA72H07-R AGCTCACCTCCTCCAAGAAG

Matches = 11

Score = 7

AGCTCACCNCNNCCN

est. tm = 22.3 oC

DeltaG @37 degrees = -6.24 kcal/mole

5'-AGCTCACCTCCTCCAAGAAG-3'

||||||||x|xx||x

3'-CAGTATCGAGTGGTGTCGGA-5'

GATA21G05-F AGGCTGTGGTGAGCTATGAC versus ATA12D05-R CACCTCAGCCTCTTTGGTAG

Matches = 10

Score = 9

CACCNCAGCCT

est. tm = 27.5 oC

DeltaG @37 degrees = -7.34 kcal/mole

5'-CACCTCAGCCTCTTTGGTAG-3'

||||x||||||

3'-CAGTATCGAGTGGTGTCGGA-5'

GATA66B04-F ATGCCCTCTTCTGTCTCTCC versus GATA13G11-R GGGTTCTGCAGAGAAACAGA

Matches = 9

Score = 7

TCTGTNTCTCN

est. tm = 13.5 oC

DeltaG @37 degrees = -4.91 kcal/mole

3'-AGACAAAGAGACGTCTTGGG-5'

|||||x||||x

5'-ATGCCCTCTTCTGTCTCTCC-3'

GATA66B04-F ATGCCCTCTTCTGTCTCTCC versus GATA68F07-R GACAGGAGACAGAATGTTATAAGTT

Matches = 11

Score = 7

GACAGNAGANNGNAT

est. tm = less than 0 oC

DeltaG @37 degrees = -1.17 kcal/mole

5'-GACAGGAGACAGAATGTTATAAGTT-3'

|||||x|||xx|x||

3'-CCTCTCTGTCTTCTCCCGTA-5'

GATA66B04-F ATGCCCTCTTCTGTCTCTCC versus GATA7G10-R GCCCAAAAAGACAGACAGAA

Matches = 10

Score = 8

TTCTGTCTNTCN

est. tm = 19.5 oC

DeltaG @37 degrees = -5.64 kcal/mole

3'-AAGACAGACAGAAAAACCCG-5'

||||||||x||x

5'-ATGCCCTCTTCTGTCTCTCC-3'

Mfd235-F ACTTTCTTGCAGTCTGTGGC versus ATTT019-R TTCATGGCCACAGAATTCAC

Matches = 11

Score = 8

NTGNANTCTGTGGC

est. tm = 23.7 oC

DeltaG @37 degrees = -6.39 kcal/mole

3'-CACTTAAGACACCGGTACTT-5'

x||x|x||||||||

5'-ACTTTCTTGCAGTCTGTGGC-3'

Mfd235-F ACTTTCTTGCAGTCTGTGGC versus GATA32B03-R AGGTATGGTGCCACACACTT

Matches = 9

Score = 7

NAGTNTGTGGC

est. tm = 21.6 oC

DeltaG @37 degrees = -6.31 kcal/mole

3'-TTCACACACCGTGGTATGGA-5'

x|||x||||||

5'-ACTTTCTTGCAGTCTGTGGC-3'

Mfd232-F AGAGTGAGATTCCACCTTTC versus ATT015-R TCACACTCTGGGGACTGTTG

Matches = 8

Score = 7

TCNCACTCT

est. tm = less than 0 oC

DeltaG @37 degrees = -3.13 kcal/mole

5'-TCACACTCTGGGGACTGTTG-3'

||x||||||

3'-CTTTCCACCTTAGAGTGAGA-5'

GATA145D10N-R TTGAGCCCAGAAGTTTGAG versus Mfd238-F TTCTGAGCACAACCAATCCT

Matches = 10

Score = 8

TTCTGNGCNCAA

est. tm = 6.4 oC

DeltaG @37 degrees = -3.55 kcal/mole

5'-TTCTGAGCACAACCAATCCT-3'

|||||x||x|||

3'-GAGTTTGAAGACCCGAGTT-5'

Mfd238-F TTCTGAGCACAACCAATCCT versus GATA13G11-R GGGTTCTGCAGAGAAACAGA

Matches = 11

Score = 7

NGGTTNTGCNNAGAA

est. tm = 15.7 oC

DeltaG @37 degrees = -4.75 kcal/mole

5'-GGGTTCTGCAGAGAAACAGA-3'

x||||x|||xx||||

3'-TCCTAACCAACACGAGTCTT-5'

Mfd238-F TTCTGAGCACAACCAATCCT versus GATA2F11-R AAGCAAAGAGGATTGAAAGTG

Matches = 10

Score = 7

CACNNNCAATCCT

est. tm = 11.2 oC

DeltaG @37 degrees = -3.83 kcal/mole

3'-GTGAAAGTTAGGAGAAACGAA-5'

|||xxx|||||||

5'-TTCTGAGCACAACCAATCCT-3'

GATA115E01N-R CAGACAGATTCCTGTGGT versus GATA51D03-F AGCCTCCATAACCACATGAA

Matches = 9

Score = 8

TTCNTGTGGT

est. tm = 11.9 oC

DeltaG @37 degrees = -4.71 kcal/mole

3'-AAGTACACCAATACCTCCGA-5'

|||x||||||

5'-CAGACAGATTCCTGTGGT-3'

GATA51D03-F AGCCTCCATAACCACATGAA versus GATA27A12-F GTGGCTTTGGAGGAACACTA

Matches = 11

Score = 7

GTGGNTNTGGAGGNN

est. tm = 21.8 oC

DeltaG @37 degrees = -6.07 kcal/mole

5'-GTGGCTTTGGAGGAACACTA-3'

||||x|x||||||xx

3'-AAGTACACCAATACCTCCGA-5'

GATA51D03-F AGCCTCCATAACCACATGAA versus GGAA5C04Z-F GAGCTTAAGGAGGCCAAGGT

Matches = 11

Score = 7

GNGNTTANGGAGGCN

est. tm = 8.3 oC

DeltaG @37 degrees = -3.71 kcal/mole

5'-GAGCTTAAGGAGGCCAAGGT-3'

|x|x|||x||||||x

3'-AAGTACACCAATACCTCCGA-5'

GATA64A09-R CAGAGTGAGACCCTGTTTCA versus GATA129B03N-F GTGTTCTCCAGTGAAACAGAGC

Matches = 9

Score = 7

NCNCTGTTTCA

est. tm = 9.4 oC

DeltaG @37 degrees = -4.08 kcal/mole

3'-CGAGACAAAGTGACCTCTTGTG-5'

x|x||||||||

5'-CAGAGTGAGACCCTGTTTCA-3'

GATA4H01-F AAACCTCTCTTTGATTGGGG versus GATA129B03N-F GTGTTCTCCAGTGAAACAGAGC

Matches = 12

Score = 7

NCTCTNTTTNANTGGNG

est. tm = less than zero

DeltaG @37 degrees = -1.45 kcal/mole

3'-CGAGACAAAGTGACCTCTTGTG-5'

x||||x|||x|x|||x|

5'-AAACCTCTCTTTGATTGGGG-3'

GATA25A04-F TAGCACTTGAGCACACATGG versus GATA129B03N-F GTGTTCTCCAGTGAAACAGAGC

Matches = 12

Score = 8

GTGTNCTCNAGTGNNA

est. tm = 8.4 oC

DeltaG @37 degrees = -3.07 kcal/mole

5'-GTGTTCTCCAGTGAAACAGAGC-3'

||||x|||x||||xx|

3'-GGTACACACGAGTTCACGAT-5'

GATA45B10N-F GTGGTGAACACCAATAAATGG versus GATA129B03N-F GTGTTCTCCAGTGAAACAGAGC

Matches = 9

Score = 7

GTGTTCNCCAN

est. tm = 17.5 oC

DeltaG @37 degrees = -5.52 kcal/mole

5'-GTGTTCTCCAGTGAAACAGAGC-3'

||||||x|||x

3'-GGTAAATAACCACAAGTGGTG-5'

GATA2A12-F TGTGTTTGGGTTTCCTCTGT versus GATA42A03-F CCAAAGACAAGTTTGTTTATCTG

Matches = 8

Score = 7

CCAAANACA

est. tm = 1.1 oC

DeltaG @37 degrees = -3.30 kcal/mole

5'-CCAAAGACAAGTTTGTTTATCTG-3'

|||||x|||

3'-TGTCTCCTTTGGGTTTGTGT-5'

GATA13G11-R GGGTTCTGCAGAGAAACAGA versus GATA42A03-F CCAAAGACAAGTTTGTTTATCTG

Matches = 10

Score = 8

CAGANAAACANA

est. tm = 3.5 oC

DeltaG @37 degrees = -2.83 kcal/mole

3'-GTCTATTTGTTTGAACAGAAACC-5'

||||x|||||x|

5'-GGGTTCTGCAGAGAAACAGA-3'

GATA4H01-F AAACCTCTCTTTGATTGGGG versus GATA42A03-F CCAAAGACAAGTTTGTTTATCTG

Matches = 11

Score = 8

NCAAAGANANGTTT

est. tm = 9.4 oC

DeltaG @37 degrees = -3.41 kcal/mole

5'-CCAAAGACAAGTTTGTTTATCTG-3'

x||||||x|x||||

3'-GGGGTTAGTTTCTCTCCAAA-5'

AAT269-F GTCGAATGATGGCTTTCCTG versus GATA11A11-R TCTGGAAAACCCTAATTCTCC

Matches = 14

Score = 8

GNNGAATNANGGNTTTCCNG

est. tm = less than zero

DeltaG @37 degrees = -0.24 kcal/mole

3'-CCTCTTAATCCCAAAAGGTCT-5'

|xx||||x|x||x|||||x|

5'-GTCGAATGATGGCTTTCCTG-3'

AAAT072-R ACTCCACCCAGGAAGTCCA versus AAT269-F GTCGAATGATGGCTTTCCTG

Matches = 9

Score = 7

CAGGAANNCCA

est. tm = 10.3 oC

DeltaG @37 degrees = -4.30 kcal/mole

3'-GTCCTTTCGGTAGTAAGCTG-5'

||||||xx|||

5'-ACTCCACCCAGGAAGTCCA-3'

AAT269-F GTCGAATGATGGCTTTCCTG versus Mfd232-R GAAACACATCATTTACCCAC

Matches = 12

Score = 7

GAAANNCATCATTNNNC

est. tm = 5.8 oC

DeltaG @37 degrees = -1.62 kcal/mole

5'-GAAACACATCATTTACCCAC-3'

||||xx|||||||xxx|

3'-GTCCTTTCGGTAGTAAGCTG-5'

AAT269-F GTCGAATGATGGCTTTCCTG versus GATA64D02-F TATTTCAAAGGCAGCAAAGC

Matches = 8

Score = 7

GCTTTNCTG

est. tm = 3.5 oC

DeltaG @37 degrees = -3.43 kcal/mole

3'-CGAAACGACGGAAACTTTAT-5'

|||||x|||

5'-GTCGAATGATGGCTTTCCTG-3'

GATA158H04-R CCAGTCTTCCGTCACTATGC versus UT254-F TCTCAGTGAAGGTAGACAGGA

Matches = 14

Score = 8

NCNNAGTGANGGNAGACNGG

est. tm = 16.0 oC

DeltaG @37 degrees = -4.23 kcal/mole

5'-TCTCAGTGAAGGTAGACAGGA-3'

x|xx|||||x||x||||x||

3'-CGTATCACTGCCTTCTGACC-5'

UT254-F TCTCAGTGAAGGTAGACAGGA versus GATA121A08N-F GTTAACAGACTATTACCTGCCTACC

Matches = 9

Score = 7

GGTAGNCAGGN

est. tm = 15.6 oC

DeltaG @37 degrees = -5.27 kcal/mole

3'-CCATCCGTCCATTATCAGACAATTG-5'

|||||x||||x

5'-TCTCAGTGAAGGTAGACAGGA-3'

UT254-F TCTCAGTGAAGGTAGACAGGA versus MFD427-AAAT028-R GGTTTCCTAACTCTTTTCCCTGA

Matches = 13

Score = 7

TCAGNGAANNNAGNNAGGA

est. tm = 6.8 oC

DeltaG @37 degrees = -2.30 kcal/mole

3'-AGTCCCTTTTCTCAATCCTTTGG-5'

||||x|||xxx||xx||||

5'-TCTCAGTGAAGGTAGACAGGA-3'

GATA64D03-R CCTCACTGAGTCATGTTGCA versus UT254-F TCTCAGTGAAGGTAGACAGGA

Matches = 9

Score = 7

NCTCAGTGANG

est. tm = 13.4 oC

DeltaG @37 degrees = -4.71 kcal/mole

5'-TCTCAGTGAAGGTAGACAGGA-3'

x||||||||x|

3'-ACGTTGTACTGAGTCACTCC-5'

GGAA3C07-F ATGTACATGTGTCTGGGAAGG versus GGAA3C07-F ATGTACATGTGTCTGGGAAGG

Matches = 8

Score = 8

ATGTACAT

est. tm = 8.7 oC

DeltaG @37 degrees = -3.42 kcal/mole

5'-ATGTACATGTGTCTGGGAAGG-3'

||||||||

3'-GGAAGGGTCTGTGTACATGTA-5'

GATA4E11-R CAGACACAAATGCACACACA versus GGAA3C07-F ATGTACATGTGTCTGGGAAGG

Matches = 11

Score = 7

NTGNANNTGTGTCTG

est. tm = 15.7 oC

DeltaG @37 degrees = -4.56 kcal/mole

5'-ATGTACATGTGTCTGGGAAGG-3'

x||x|xx||||||||

3'-ACACACACGTAAACACAGAC-5'

GGAA3C07-F ATGTACATGTGTCTGGGAAGG versus GATA91H06-F ACACAGATGTGCATCTATCTCG

Matches = 11

Score = 8

ANACANATGTNCAT

est. tm = less than 0 oC

DeltaG @37 degrees = -1.83 kcal/mole

5'-ACACAGATGTGCATCTATCTCG-3'

|x|||x||||x|||

3'-GGAAGGGTCTGTGTACATGTA-5'

GATA27A12-R TGGCACATGTACACCAGAAC versus GGAA3C07-F ATGTACATGTGTCTGGGAAGG

Matches = 11

Score = 8

NTGTACATGTGNCN

est. tm = 26.9 oC

DeltaG @37 degrees = -6.92 kcal/mole

5'-ATGTACATGTGTCTGGGAAGG-3'

x||||||||||x|x

3'-CAAGACCACATGTACACGGT-5'

GATA48E02-R CAGATTTCTGCTTTCCCAGA versus GGAA3C07-F ATGTACATGTGTCTGGGAAGG

Matches = 9

Score = 8

CNTTCCCAGA

est. tm = 12.9 oC

DeltaG @37 degrees = -4.84 kcal/mole

3'-GGAAGGGTCTGTGTACATGTA-5'

|x||||||||

5'-CAGATTTCTGCTTTCCCAGA-3'

PAH-R AATCATAAGTGTTCCCAGAC versus GGAA3C07-F ATGTACATGTGTCTGGGAAGG

Matches = 9

Score = 7

NNTTCCCAGAC

est. tm = 24.3 oC

DeltaG @37 degrees = -6.64 kcal/mole

3'-GGAAGGGTCTGTGTACATGTA-5'

xx|||||||||

5'-AATCATAAGTGTTCCCAGAC-3'

GGAA3C07-F ATGTACATGTGTCTGGGAAGG versus ATA29A06N-R ACCACACACAGCTACTTTTGC

Matches = 12

Score = 7

NCCANACACANNTACNT

est. tm = 9.4 oC

DeltaG @37 degrees = -3.35 kcal/mole

5'-ACCACACACAGCTACTTTTGC-3'

x|||x|||||xx|||x|

3'-GGAAGGGTCTGTGTACATGTA-5'

GATA3E10-R GGGGGAAAAAGAACACTGTA versus ATA27F01-F GAGTTTGAAAATAAAGTGTTCTGC

Matches = 10

Score = 7

NNAGAACACTNTA

est. tm = 11.7 oC

DeltaG @37 degrees = -3.98 kcal/mole

3'-CGTCTTGTGAAATAAAAGTTTGAG-5'

xx||||||||x||

5'-GGGGGAAAAAGAACACTGTA-3'

AATA058-R GGGAGGACATTGCAGAAAAC versus ATA27F01-F GAGTTTGAAAATAAAGTGTTCTGC

Matches = 8

Score = 7

GCAGAANAC

est. tm = 6.4 oC

DeltaG @37 degrees = -3.89 kcal/mole

3'-CGTCTTGTGAAATAAAAGTTTGAG-5'

||||||x||

5'-GGGAGGACATTGCAGAAAAC-3'

AGAT120-R TTGTCTGTCATCTATCTACCCATC versus UT1355Z-F AGGATGGATAAATAGAACATAGGTAGA

Matches = 16

Score = 8

GATGGNTANATAGANNANAGNNAN

est. tm = 5.3 oC

DeltaG @37 degrees = -0.90 kcal/mole

5'-AGGATGGATAAATAGAACATAGGTAGA-3'

|||||x||x|||||xx|x||xx|x

3'-CTACCCATCTATCTACTGTCTGTT-5'

GGAT3F08-R TATCCATCCATCCATCAACC versus UT1355Z-F AGGATGGATAAATAGAACATAGGTAGA

Matches = 9

Score = 8

NGGATGGATA

est. tm = 19.7 oC

DeltaG @37 degrees = -5.84 kcal/mole

5'-AGGATGGATAAATAGAACATAGGTAGA-3'

x|||||||||

3'-CCAACTACCTACCTACCTAT-5'

GGAT3F08-R TATCCATCCATCCATCAACC versus UT1355Z-F AGGATGGATAAATAGAACATAGGTAGA

Matches = 11

Score = 8

NGGATGGATNNATA

est. tm = 16.9 oC

DeltaG @37 degrees = -4.79 kcal/mole

5'-AGGATGGATAAATAGAACATAGGTAGA-3'

x||||||||xx|||

3'-CCAACTACCTACCTACCTAT-5'

GATA198B05N-F GGAGCCAATTCACCTAAT versus GATA23F05-F ATGGTATTAGGAGATGGGGC

Matches = 11

Score = 7

GCCNNNTCNCCTAAT

est. tm = 7.9 oC

DeltaG @37 degrees = -3.15 kcal/mole

3'-CGGGGTAGAGGATTATGGTA-5'

|||xxx||x||||||

5'-GGAGCCAATTCACCTAAT-3'

ATTT019-F GCTGCCACTTTCCCTTTTAC versus GATA8C04-R TAAAATAGAAAGTGCCCCTCC

Matches = 13

Score = 7

TAAAANNGAAAGTGNCNNN

est. tm = 12.1 oC

DeltaG @37 degrees = -2.81 kcal/mole

5'-TAAAATAGAAAGTGCCCCTCC-3'

|||||xx|||||||x|xxx

3'-CATTTTCCCTTTCACCGTCG-5'

GATA2A12-F TGTGTTTGGGTTTCCTCTGT versus GATA11B12-F AACAAAACAAAACAAAACAAACA

Matches = 14

Score = 8

ACANANNAAANCNAAACANA

est. tm = less than zero

DeltaG @37 degrees = greater than zero

5'-AACAAAACAAAACAAAACAAACA-3'

|||x|xx|||x|x|||||x|

3'-TGTCTCCTTTGGGTTTGTGT-5'

GATA29A05-F TTTTGTTTCTTGATCTGGGC versus GATA11B12-F AACAAAACAAAACAAAACAAACA

Matches = 7

Score = 7

AACAAAA

est. tm = less than 0 oC

DeltaG @37 degrees = -2.94 kcal/mole

5'-AACAAAACAAAACAAAACAAACA-3'

|||||||

3'-CGGGTCTAGTTCTTTGTTTT-5'

GATA71C09-R TTGAATTGTTCTGGTACCTCTG versus GATA11B12-F AACAAAACAAAACAAAACAAACA

Matches = 11

Score = 7

ANCANAACAANNCAA

est. tm = less than 0 oC

DeltaG @37 degrees = -1.00 kcal/mole

5'-AACAAAACAAAACAAAACAAACA-3'

|x||x|||||xx|||

3'-GTCTCCATGGTCTTGTTAAGTT-5'

UT7136-F AGGAGGCAGAGGTTACAGTA versus GATA5B02-R CAGACATTCTTTATTCTTTACCTCC

Matches = 13

Score = 7

GGAGGNANAGNNTANAGNA

est. tm = less than zero

DeltaG @37 degrees = greater than zero

3'-CCTCCATTTCTTATTTCTTACAGAC-5'

|||||x|x||xx||x||x|

5'-AGGAGGCAGAGGTTACAGTA-3'

UT7136-F AGGAGGCAGAGGTTACAGTA versus ATA12D05-R CACCTCAGCCTCTTTGGTAG

Matches = 11

Score = 8

NACCTCNGCCTCNT

est. tm = 22.9 oC

DeltaG @37 degrees = -6.38 kcal/mole

5'-CACCTCAGCCTCTTTGGTAG-3'

x|||||x|||||x|

3'-ATGACATTGGAGACGGAGGA-5'

UT7136-F AGGAGGCAGAGGTTACAGTA versus GATA71C09-R TTGAATTGTTCTGGTACCTCTG

Matches = 11

Score = 8

CAGAGGTNNCAGNA

est. tm = 13.1 oC

DeltaG @37 degrees = -4.24 kcal/mole

3'-GTCTCCATGGTCTTGTTAAGTT-5'

|||||||xx|||x|

5'-AGGAGGCAGAGGTTACAGTA-3'

UT7136-F AGGAGGCAGAGGTTACAGTA versus GATA185H04N-R ATATTTCAATATTGTAACCAGTCC

Matches = 11

Score = 7

GNANNGGTTACANTA

est. tm = less than zero

DeltaG @37 degrees = -0.58 kcal/mole

3'-CCTGACCAATGTTATAACTTTATA-5'

|x|xx|||||||x||

5'-AGGAGGCAGAGGTTACAGTA-3'

GATA2A12-F TGTGTTTGGGTTTCCTCTGT versus ATA47D07-R TCAGATGACAGACAAACTCAGG

Matches = 14

Score = 8

NCAGANGANANNCAAACNCA

est. tm = 9.8 oC

DeltaG @37 degrees = -2.72 kcal/mole

5'-TCAGATGACAGACAAACTCAGG-3'

x||||x||x|xx|||||x||

3'-TGTCTCCTTTGGGTTTGTGT-5'

GATA2A12-F TGTGTTTGGGTTTCCTCTGT versus ATA24F10-R GTTACATAGGAAGCCCGGAT

Matches = 12

Score = 7

NTNNGGGNTTCCTNTGT

est. tm = 12.6 oC

DeltaG @37 degrees = -4.20 kcal/mole

3'-TAGGCCCGAAGGATACATTG-5'

x|xx|||x|||||x|||

5'-TGTGTTTGGGTTTCCTCTGT-3'

GATA2A12-F TGTGTTTGGGTTTCCTCTGT versus GATA3F01-R CTGAGGTATCAAAAACTCAGAGG

Matches = 13

Score = 7

CNGAGGNANCNNAAACNCA

est. tm = less than 0 oC

DeltaG @37 degrees = > 0 kcal/mole

5'-CTGAGGTATCAAAAACTCAGAGG-3'

|x||||x|x|xx||||x||

3'-TGTCTCCTTTGGGTTTGTGT-5'

GATA2A12-F TGTGTTTGGGTTTCCTCTGT versus GATA46A12-R AAAGAGTAAACTCAATGAAAGATGC

Matches = 14

Score = 8

ANAGAGNAAACNCAANNANA

est. tm = less than 0 oC

DeltaG @37 degrees = > 0 kcal/mole

5'-AAAGAGTAAACTCAATGAAAGATGC-3'

|x||||x||||x|||xx|x|

3'-TGTCTCCTTTGGGTTTGTGT-5'

GATA52B03-F GAGCAATGATCTCATTTGCA versus AGAT060-R TACCATGCCAAGGACATCAA

Matches = 11

Score = 7

NTGATNTCNTTNGCA

est. tm = 3.7 oC

DeltaG @37 degrees = -2.82 kcal/mole

3'-AACTACAGGAACCGTACCAT-5'

x||||x||x||x|||

5'-GAGCAATGATCTCATTTGCA-3'

GATA52B03-F GAGCAATGATCTCATTTGCA versus TATC043-F GCCATCCTCCTGCAAATAAG

Matches = 9

Score = 8

CTNATTTGCA

est. tm = 9.9 oC

DeltaG @37 degrees = -4.13 kcal/mole

3'-GAATAAACGTCCTCCTACCG-5'

||x|||||||

5'-GAGCAATGATCTCATTTGCA-3'

AAAT072-R ACTCCACCCAGGAAGTCCA versus GATA175D03-F TGGAGTCTCTGGGTGAAGAG

Matches = 14

Score = 9

TGGANTNNCTGGGTGNAGN

est. tm = 28.7 oC

DeltaG @37 degrees = -7.23 kcal/mole

5'-TGGAGTCTCTGGGTGAAGAG-3'

||||x|xx|||||||x||x

3'-ACCTGAAGGACCCACCTCA-5'

GATA175D03-F TGGAGTCTCTGGGTGAAGAG versus TTCA004-R CCCAGAGCCTAAATCTGTGC

Matches = 10

Score = 7

CCCAGAGNCTNNA

est. tm = 5.5 oC

DeltaG @37 degrees = -3.44 kcal/mole

5'-CCCAGAGCCTAAATCTGTGC-3'

|||||||x||xx|

3'-GAGAAGTGGGTCTCTGAGGT-5'

GATA175D03-F TGGAGTCTCTGGGTGAAGAG versus GATA84C01-F CAGACTCCAGAAAACAGAACC

Matches = 8

Score = 7

NAGACTCCA

est. tm = 18.8 oC

DeltaG @37 degrees = -5.98 kcal/mole

5'-CAGACTCCAGAAAACAGAACC-3'

x||||||||

3'-GAGAAGTGGGTCTCTGAGGT-5'

GATA175D03-F TGGAGTCTCTGGGTGAAGAG versus MFD427-AAAT028-R GGTTTCCTAACTCTTTTCCCTGA

Matches = 10

Score = 7

TCNGGGNNAAGAG

est. tm = 3.4 oC

DeltaG @37 degrees = -3.02 kcal/mole

3'-AGTCCCTTTTCTCAATCCTTTGG-5'

||x|||xx|||||

5'-TGGAGTCTCTGGGTGAAGAG-3'

GATA124E07-F CCAGCCTGGCTGTTAGAGTA versus GATA124E07-F CCAGCCTGGCTGTTAGAGTA

Matches = 8

Score = 7

CCAGNCTGG

est. tm = 7.3 oC

DeltaG @37 degrees = -4.28 kcal/mole

5'-CCAGCCTGGCTGTTAGAGTA-3'

||||x||||

3'-ATGAGATTGTCGGTCCGACC-5'

GATA124E07-F CCAGCCTGGCTGTTAGAGTA versus GATA124E07-F CCAGCCTGGCTGTTAGAGTA

Matches = 10

Score = 7

NCAGCCNGGCTGN

est. tm = 36.0 oC

DeltaG @37 degrees = -9.16 kcal/mole

5'-CCAGCCTGGCTGTTAGAGTA-3'

x|||||x|||||x

3'-ATGAGATTGTCGGTCCGACC-5'

AAT193-F CACAACAGCGAAACTCCATC versus GGAA6D03N-R CTCAGATGGAGATTCCCTCC

Matches = 12

Score = 8

NNAGNGAANCTCCATC

est. tm = 17.3 oC

DeltaG @37 degrees = -4.62 kcal/mole

3'-CCTCCCTTAGAGGTAGACTC-5'

xx||x|||x|||||||

5'-CACAACAGCGAAACTCCATC-3'

AAT193-F CACAACAGCGAAACTCCATC versus AAT013-F GCTGTGGTGAGCTGTGATTG

Matches = 8

Score = 7

GCTGTNGTG

est. tm = 9.7 oC

DeltaG @37 degrees = -4.47 kcal/mole

5'-GCTGTGGTGAGCTGTGATTG-3'

|||||x|||

3'-CTACCTCAAAGCGACAACAC-5'

GATA7D12-R ACCTAAATGTTCATCAAAAGAGG versus GATA31F01-F TTGGTACTTAATAAACCCTCTTTT

Matches = 8

Score = 8

AAAAGAGG

est. tm = 11.0 oC

DeltaG @37 degrees = -4.51 kcal/mole

3'-TTTTCTCCCAAATAATTCATGGTT-5'

||||||||

5'-ACCTAAATGTTCATCAAAAGAGG-3'

GATA164A09-F AGAGCCCATGGAGCTATCTT versus GATA23F06-R GAGTAAACAAGATTGCTAGATAGGC

Matches = 13

Score = 9

GCCNATNNAGCNATCTT

est. tm = 17.0 oC

DeltaG @37 degrees = -4.56 kcal/mole

3'-CGGATAGATCGTTAGAACAAATGAG-5'

|||x||xx|||x|||||

5'-AGAGCCCATGGAGCTATCTT-3'

GATA85D02-R GCTAAGATGGCGCCATTG versus GATA164A09-F AGAGCCCATGGAGCTATCTT

Matches = 12

Score = 9

AAGATNGCNCCATNG

est. tm = 9.6 oC

DeltaG @37 degrees = -3.46 kcal/mole

3'-TTCTATCGAGGTACCCGAGA-5'

|||||x||x||||x|

5'-GCTAAGATGGCGCCATTG-3'

ATCT003-F GGCCTCCAGCTTACAGACAG versus ATA26D07-R GGCCCTGTGTAGAAGCTGTA

Matches = 12

Score = 8

TNCAGCTTNNANACAG

est. tm = 9.9 oC

DeltaG @37 degrees = -3.38 kcal/mole

3'-ATGTCGAAGATGTGTCCCGG-5'

|x||||||xx|x||||

5'-GGCCTCCAGCTTACAGACAG-3'

CTAT014-F TTTGTGGGGAGCCCTAGAC versus ATA5A04N-R TTCAGTCTTGATCTAGTGCTCC

Matches = 10

Score = 8

GGAGCNCTAGAN

est. tm = 23.3 oC

DeltaG @37 degrees = -6.40 kcal/mole

3'-CCTCGTGATCTAGTTCTGACTT-5'

|||||x|||||x

5'-TTTGTGGGGAGCCCTAGAC-3'

CTAT014-F TTTGTGGGGAGCCCTAGAC versus GATA187D09N-R CCACAAATACATTTCCCTGA

Matches = 7

Score = 7

CCACAAA

est. tm = 6.5 oC

DeltaG @37 degrees = -4.26 kcal/mole

5'-CCACAAATACATTTCCCTGA-3'

|||||||

3'-CAGATCCCGAGGGGTGTTT-5'

TTTA062-F AGCCTCCTACCTTGCCTTCT versus AAT193-R GCAAGGATGCAGAAGGAAAG

Matches = 9

Score = 8

CTTNCCTTCT

est. tm = 7.4 oC

DeltaG @37 degrees = -3.82 kcal/mole

3'-GAAAGGAAGACGTAGGAACG-5'

|||x||||||

5'-AGCCTCCTACCTTGCCTTCT-3'

TTTA062-F AGCCTCCTACCTTGCCTTCT versus GATA68A03-F TGATTACTCTGAGGAAGAAGGC

Matches = 7

Score = 7

GCCTTCT

est. tm = 10.7 oC

DeltaG @37 degrees = -5.00 kcal/mole

3'-CGGAAGAAGGAGTCTCATTAGT-5'

|||||||

5'-AGCCTCCTACCTTGCCTTCT-3'

TTTA062-F AGCCTCCTACCTTGCCTTCT versus GGAA2F11N-F AAGATACACAGGAAGAAAGAAAGG

Matches = 9

Score = 7

CCTTNCNTTCT

est. tm = less than zero

DeltaG @37 degrees = -1.85 kcal/mole

3'-GGAAAGAAAGAAGGACACATAGAA-5'

||||x|x||||

5'-AGCCTCCTACCTTGCCTTCT-3'

TTTA062-F AGCCTCCTACCTTGCCTTCT versus GATA31E08-F AGGGGAGAAGGCTAGAATGA

Matches = 10

Score = 7

ANGGNAGNAGGCT

est. tm = less than 0 oC

DeltaG @37 degrees = -2.83 kcal/mole

5'-AGGGGAGAAGGCTAGAATGA-3'

|x||x||x|||||

3'-TCTTCCGTTCCATCCTCCGA-5'

TTTA062-F AGCCTCCTACCTTGCCTTCT versus GATA6B09-R ACATCTGAGACTTGTAGTAGAAGGC

Matches = 7

Score = 7

GCCTTCT

est. tm = 10.7 oC

DeltaG @37 degrees = -5.00 kcal/mole

3'-CGGAAGATGATGTTCAGAGTCTACA-5'

|||||||

5'-AGCCTCCTACCTTGCCTTCT-3'

GATA64H04-F GATGATAGAGATGGCACATGA versus GATA30F10A-F CCAACTCTCATCTGTATTATCTATG

Matches = 14

Score = 7

NCANNTNNCATCTNTATNATC

est. tm = 0.3 oC

DeltaG @37 degrees = -0.37 kcal/mole

5'-CCAACTCTCATCTGTATTATCTATG-3'

x||xx|xx|||||x|||x|||

3'-AGTACACGGTAGAGATAGTAG-5'

GATA30F10A-F CCAACTCTCATCTGTATTATCTATG versus GATA6B09-R ACATCTGAGACTTGTAGTAGAAGGC

Matches = 11

Score = 7

ACANNTGAGANTTGN

est. tm = 13.8 oC

DeltaG @37 degrees = -4.31 kcal/mole

5'-ACATCTGAGACTTGTAGTAGAAGGC-3'

|||xx|||||x|||x

3'-GTATCTATTATGTCTACTCTCAACC-5'

GATA81D05-R CTCAAGTCCCAAAAATGAGG versus GATA31E10-F TATATTTTACACATTTTTGGGCC

Matches = 12

Score = 9

GNCCCAAAAATGNGN

est. tm = 21.0 oC

DeltaG @37 degrees = -5.52 kcal/mole

3'-CCGGGTTTTTACACATTTTATAT-5'

|x||||||||||x|x

5'-CTCAAGTCCCAAAAATGAGG-3'

GATA8C04-R TAAAATAGAAAGTGCCCCTCC versus GATA31E10-F TATATTTTACACATTTTTGGGCC

Matches = 8

Score = 7

TNTATTTTA

est. tm = less than 0 oC

DeltaG @37 degrees = -0.12 kcal/mole

5'-TATATTTTACACATTTTTGGGCC-3'

|x|||||||

3'-CCTCCCCGTGAAAGATAAAAT-5'

CATC015-R TCCAACAGTCCCTGGAACAC versus ATA22E01-R AGGACTGTAGGATTCCAAAGG

Matches = 10

Score = 8

NGGACTGTNGGA

est. tm = 24.4 oC

DeltaG @37 degrees = -6.73 kcal/mole

5'-AGGACTGTAGGATTCCAAAGG-3'

x|||||||x|||

3'-CACAAGGTCCCTGACAACCT-5'

CATC015-R TCCAACAGTCCCTGGAACAC versus GATA84E11-F TGTTGGAAGACTTCTCAGCC

Matches = 7

Score = 7

TGTTGGA

est. tm = 6.7 oC

DeltaG @37 degrees = -4.50 kcal/mole

5'-TGTTGGAAGACTTCTCAGCC-3'

|||||||

3'-CACAAGGTCCCTGACAACCT-5'

CATC015-R TCCAACAGTCCCTGGAACAC versus GATA48D07-R TGTAACAAGGGCTATGGGAA

Matches = 13

Score = 7

TGTNNCANGGNCTNTNGGA

est. tm = less than 0 oC

DeltaG @37 degrees = -0.83 kcal/mole

5'-TGTAACAAGGGCTATGGGAA-3'

|||xx||x||x||x|x|||

3'-CACAAGGTCCCTGACAACCT-5'

CATC015-R TCCAACAGTCCCTGGAACAC versus GGAA2A03-R TAGGTTTTTAAGGAACAGGTGG

Matches = 13

Score = 7

CCANCNGTNCCTNNAANAC

est. tm = less than zero

DeltaG @37 degrees = -0.64 kcal/mole

3'-GGTGGACAAGGAATTTTTGGAT-5'

|||x|x||x|||xx||x||

5'-TCCAACAGTCCCTGGAACAC-3'

GATA27E01-R AAGGAGGAAAGCTTTTTGGA versus GATA72H07-R AGCTCACCTCCTCCAAGAAG

Matches = 8

Score = 7

CTTNTTGGA

est. tm = less than zero

DeltaG @37 degrees = -2.99 kcal/mole

3'-GAAGAACCTCCTCCACTCGA-5'

|||x|||||

5'-AAGGAGGAAAGCTTTTTGGA-3'

GATA27E01-R AAGGAGGAAAGCTTTTTGGA versus GATA72H07-R AGCTCACCTCCTCCAAGAAG

Matches = 10

Score = 7

AGCTNNCCTCCTN

est. tm = 25.0 oC

DeltaG @37 degrees = -6.86 kcal/mole

5'-AGCTCACCTCCTCCAAGAAG-3'

||||xx||||||x

3'-AGGTTTTTCGAAAGGAGGAA-5'

GATA21D04-F TAGGTTCTGGGCATGTCTGT versus ATA47D07-R TCAGATGACAGACAAACTCAGG

Matches = 11

Score = 7

NCTGNGNNTGTCTGT

est. tm = 13.7 oC

DeltaG @37 degrees = -4.32 kcal/mole

3'-GGACTCAAACAGACAGTAGACT-5'

x|||x|xx|||||||

5'-TAGGTTCTGGGCATGTCTGT-3'

ATA47D07-R TCAGATGACAGACAAACTCAGG versus AGAT120-R TTGTCTGTCATCTATCTACCCATC

Matches = 13

Score = 11

TTGTCTGTCATCTNN

est. tm = 39.2 oC

DeltaG @37 degrees = -10.04 kcal/mole

5'-TTGTCTGTCATCTATCTACCCATC-3'

|||||||||||||xx

3'-GGACTCAAACAGACAGTAGACT-5'

ATA78D02N-R GGCAAGAGAACTCACGTAA versus GATA129H04-R GGTCTCTTACCTGGCAGACA

Matches = 9

Score = 7

GNTCTCTTNCC

est. tm = less than 0 oC

DeltaG @37 degrees = -2.21 kcal/mole

5'-GGTCTCTTACCTGGCAGACA-3'

|x||||||x||

3'-AATGCACTCAAGAGAACGG-5'

GATA129H04-R GGTCTCTTACCTGGCAGACA versus GATA177C03N-R GCTGTAAGAGACCTGTGTTG

Matches = 10

Score = 7

NNNGTAAGAGACC

est. tm = 21.8 oC

DeltaG @37 degrees = -5.72 kcal/mole

5'-GCTGTAAGAGACCTGTGTTG-3'

xxx||||||||||

3'-ACAGACGGTCCATTCTCTGG-5'

GATA129H04-R GGTCTCTTACCTGGCAGACA versus GATA12H10-F ATGTAGACTGCTAACAGTGTCTGC

Matches = 7

Score = 7

GCAGACA

est. tm = 12.8 oC

DeltaG @37 degrees = -5.24 kcal/mole

3'-CGTCTGTGACAATCGTCAGATGTA-5'

|||||||

5'-GGTCTCTTACCTGGCAGACA-3'

GATA129H04-R GGTCTCTTACCTGGCAGACA versus GATA71H05-R GACATTGTCAGTGTCAGCCA

Matches = 8

Score = 7

TGGCNGACA

est. tm = 9.0 oC

DeltaG @37 degrees = -4.76 kcal/mole

3'-ACCGACTGTGACTGTTACAG-5'

||||x||||

5'-GGTCTCTTACCTGGCAGACA-3'

GATA109-R GACCCTGTCTCAAAAAAAACA versus GATA6C01-F TCTAGGATGTTTTTAGAGAAAGGC

Matches = 13

Score = 7

NCCTNTCTCNAAAAANANN

est. tm = 13.8 oC

DeltaG @37 degrees = -3.74 kcal/mole

3'-CGGAAAGAGATTTTTGTAGGATCT-5'

x|||x||||x|||||x|xx

5'-GACCCTGTCTCAAAAAAAACA-3'

GATA109-R GACCCTGTCTCAAAAAAAACA versus GATA81B01-R AAGACAGTGTCTAAGCTGTCACA

Matches = 9

Score = 7

NAGACAGNGTC

est. tm = 13.3 oC

DeltaG @37 degrees = -4.70 kcal/mole

5'-AAGACAGTGTCTAAGCTGTCACA-3'

x||||||x|||

3'-ACAAAAAAAACTCTGTCCCAG-5'

GATA4E11-R CAGACACAAATGCACACACA versus GATA124C08N-R ATGTGTGTGCATCTGTCTCTCTCA

Matches = 17

Score = 14

TGTGTGTGCATNTGTNTCTN

est. tm = 46.6 oC

DeltaG @37 degrees = -12.82 kcal/mole

5'-ATGTGTGTGCATCTGTCTCTCTCA-3'

|||||||||||x|||x|||x

3'-ACACACACGTAAACACAGAC-5'

GATA124C08N-R ATGTGTGTGCATCTGTCTCTCTCA versus GATA23F08-R TATATTTCTTGGGAAAGATAGATGG

Matches = 12

Score = 8

NCATCTNTCTNTCNCA

est. tm = 8.2 oC

DeltaG @37 degrees = -3.18 kcal/mole

3'-GGTAGATAGAAAGGGTTCTTTATAT-5'

x|||||x|||x||x||

5'-ATGTGTGTGCATCTGTCTCTCTCA-3'

GATA13G11-R GGGTTCTGCAGAGAAACAGA versus GATA124C08N-R ATGTGTGTGCATCTGTCTCTCTCA

Matches = 10

Score = 7

NNAGAGANACAGA

est. tm = 15.7 oC

DeltaG @37 degrees = -4.83 kcal/mole

3'-ACTCTCTCTGTCTACGTGTGTGTA-5'

xx|||||x|||||

5'-GGGTTCTGCAGAGAAACAGA-3'

GATA198B05N-R GAGAGACAGAACCTATAGCATGC versus GATA124C08N-R ATGTGTGTGCATCTGTCTCTCTCA

Matches = 14

Score = 7

ATGNNNNNGNNTCTGTCTCTC

est. tm = 17.2 oC

DeltaG @37 degrees = -3.66 kcal/mole

5'-ATGTGTGTGCATCTGTCTCTCTCA-3'

|||xxxxx|xx||||||||||

3'-CGTACGATATCCAAGACAGAGAG-5'

GATA165G02N-F CAGGATTTTTCAGAAAGACA versus GATA124C08N-R ATGTGTGTGCATCTGTCTCTCTCA

Matches = 9

Score = 7

TNAGANAGACA

est. tm = less than zero

DeltaG @37 degrees = -2.16 kcal/mole

3'-ACTCTCTCTGTCTACGTGTGTGTA-5'

|x|||x|||||

5'-CAGGATTTTTCAGAAAGACA-3'

GATA22G12-R GGGTGACAGAGTGAGATGTG versus GATA124C08N-R ATGTGTGTGCATCTGTCTCTCTCA

Matches = 12

Score = 7

TGANAGAGNNAGATGNN

est. tm = 15.1 oC

DeltaG @37 degrees = -4.19 kcal/mole

3'-ACTCTCTCTGTCTACGTGTGTGTA-5'

|||x||||xx|||||xx

5'-GGGTGACAGAGTGAGATGTG-3'

GATA84E11-R CACACATGCTGTGTCTCTCA versus GATA124C08N-R ATGTGTGTGCATCTGTCTCTCTCA

Matches = 7

Score = 7

ATGTGTG

est. tm = 6.3 oC

DeltaG @37 degrees = -4.19 kcal/mole

5'-ATGTGTGTGCATCTGTCTCTCTCA-3'

|||||||

3'-ACTCTCTGTGTCGTACACAC-5'

ATA25E07-R TTTTGGATTCGAGGTTACCA versus GATA24D12-R ACCCAGGATTGTGCTAACCT

Matches = 8

Score = 7

AGGTTANCA

est. tm = less than zero

DeltaG @37 degrees = -2.65 kcal/mole

3'-TCCAATCGTGTTAGGACCCA-5'

||||||x||

5'-TTTTGGATTCGAGGTTACCA-3'

ATA25E07-R TTTTGGATTCGAGGTTACCA versus GATA81D05-R CTCAAGTCCCAAAAATGAGG

Matches = 10

Score = 7

CTCNANTCCNAAA

est. tm = less than 0 oC

DeltaG @37 degrees = -0.92 kcal/mole

5'-CTCAAGTCCCAAAAATGAGG-3'

|||x|x|||x|||

3'-ACCATTGGAGCTTAGGTTTT-5'

GGAA5F09-R ACCATGGTACTCAGCAGTGC versus GGAA5F09-R ACCATGGTACTCAGCAGTGC

Matches = 8

Score = 8

ACCATGGT

est. tm = 20.7 oC

DeltaG @37 degrees = -5.61 kcal/mole

5'-ACCATGGTACTCAGCAGTGC-3'

||||||||

3'-CGTGACGACTCATGGTACCA-5'

UT721-F TTGGTCTCCTCTGATGGGT versus TATC028-R AGCACCAACCACCATAGGAG

Matches = 11

Score = 8

CTCCTNTGNTGGNT

est. tm = 5.4 oC

DeltaG @37 degrees = -3.33 kcal/mole

3'-GAGGATACCACCAACCACGA-5'

|||||x||x|||x|

5'-TTGGTCTCCTCTGATGGGT-3'

TATC028-R AGCACCAACCACCATAGGAG versus GATA87E02N-F GTTGTTGCTGGGCTTAGAAA

Matches = 8

Score = 7

GTTGNTGCT

est. tm = 5.7 oC

DeltaG @37 degrees = -3.98 kcal/mole

5'-GTTGTTGCTGGGCTTAGAAA-3'

||||x||||

3'-GAGGATACCACCAACCACGA-5'

GATA7C01-R AAAAAGAGTGTGGGCAACTG versus Mfd232-R GAAACACATCATTTACCCAC

Matches = 9

Score = 7

GTGGGNAANTG

est. tm = 1.9 oC

DeltaG @37 degrees = -3.21 kcal/mole

3'-CACCCATTTACTACACAAAG-5'

|||||x||x||

5'-AAAAAGAGTGTGGGCAACTG-3'

GATA7C01-R AAAAAGAGTGTGGGCAACTG versus AAT269-R CCCAGTGCCCATACACTTTT

Matches = 14

Score = 9

AAAAGNGTNTGGGCANNNG

est. tm = 21.5 oC

DeltaG @37 degrees = -5.25 kcal/mole

3'-TTTTCACATACCCGTGACCC-5'

|||||x||x||||||xxx|

5'-AAAAAGAGTGTGGGCAACTG-3'

GATA7C01-R AAAAAGAGTGTGGGCAACTG versus ATA27F01-R CCCCACCCCTTTTAGTTTTA

Matches = 10

Score = 7

CCNCACNCNTTTT

est. tm = less than 0 oC

DeltaG @37 degrees = -0.93 kcal/mole

5'-CCCCACCCCTTTTAGTTTTA-3'

||x|||x|x||||

3'-GTCAACGGGTGTGAGAAAAA-5'

GATA7C01-R AAAAAGAGTGTGGGCAACTG versus SDF1-R GAACAGGCAAAGATGCCCACTCTC

Matches = 12

Score = 9

GAGNGTGGGCANCTN

est. tm = 32.0 oC

DeltaG @37 degrees = -8.16 kcal/mole

3'-CTCTCACCCGTAGAAACGGACAAG-5'

|||x|||||||x||x

5'-AAAAAGAGTGTGGGCAACTG-3'

GATA124F08-R GAGAAAGAAGCCCCAAGAAC versus GATA8A05-F TGGTTCTGCTTTTTCTCTCC

Matches = 11

Score = 7

TGGNNCTNCTTTNTC

est. tm = less than 0 oC

DeltaG @37 degrees = -1.39 kcal/mole

5'-TGGTTCTGCTTTTTCTCTCC-3'

|||xx||x||||x||

3'-CAAGAACCCCGAAGAAAGAG-5'

GATA124F08-R GAGAAAGAAGCCCCAAGAAC versus ATA41E04-F TGTGATTCAGTAGGTCTTGGG

Matches = 8

Score = 7

CCCAAGANC

est. tm = 5.0 oC

DeltaG @37 degrees = -3.86 kcal/mole

3'-GGGTTCTGGATGACTTAGTGT-5'

|||||||x|

5'-GAGAAAGAAGCCCCAAGAAC-3'

GATA124F08-R GAGAAAGAAGCCCCAAGAAC versus GATA152F05-R TTCTTTGTCTGTGTGCGTGT

Matches = 8

Score = 7

TTCTTTNTC

est. tm = less than 0 oC

DeltaG @37 degrees = -2.03 kcal/mole

5'-TTCTTTGTCTGTGTGCGTGT-3'

||||||x||

3'-CAAGAACCCCGAAGAAAGAG-5'

GATA64D02-F TATTTCAAAGGCAGCAAAGC versus GATA22D12-R TTTGATGAGCTTGAACTAGGG

Matches = 13

Score = 8

TTTGNTGNNNTTGAANTA

est. tm = 2.9 oC

DeltaG @37 degrees = -1.22 kcal/mole

5'-TTTGATGAGCTTGAACTAGGG-3'

||||x||xxx|||||x||

3'-CGAAACGACGGAAACTTTAT-5'

GATA11E09-R CATCCTTCCTGGTCCCTAGT versus GATA22D12-R TTTGATGAGCTTGAACTAGGG

Matches = 7

Score = 7

CCCTAGT

est. tm = 5.5 oC

DeltaG @37 degrees = -4.31 kcal/mole

3'-GGGATCAAGTTCGAGTAGTTT-5'

|||||||

5'-CATCCTTCCTGGTCCCTAGT-3'

TTTA049-R GGGTGACAGAGCAAGACTCC versus GATA73E11-F TTGGTGGTGTCATCCTCTTT

Matches = 11

Score = 7

ANAGAGNANGACNCC

est. tm = less than zero

DeltaG @37 degrees = -0.67 kcal/mole

3'-TTTCTCCTACTGTGGTGGTT-5'

|x||||x|x|||x||

5'-GGGTGACAGAGCAAGACTCC-3'

TTTA049-R GGGTGACAGAGCAAGACTCC versus GATA30G01-R AATGAGGTCTTACTTTGTTGCC

Matches = 13

Score = 7

GGNNACANAGNAAGACNNC

est. tm = 1.9 oC

DeltaG @37 degrees = -1.41 kcal/mole

3'-CCGTTGTTTCATTCTGGAGTAA-5'

||xx|||x||x|||||xx|

5'-GGGTGACAGAGCAAGACTCC-3'

ATA29A06N-R ACCACACACAGCTACTTTTGC versus GATA72G11N-R CAAAATTAGCTGGGTATTGTCTAG

Matches = 16

Score = 12

CAAAANTAGCTGNGTNTNGT

est. tm = 22.2 oC

DeltaG @37 degrees = -5.04 kcal/mole

5'-CAAAATTAGCTGGGTATTGTCTAG-3'

|||||x||||||x||x|x||

3'-CGTTTTCATCGACACACACCA-5'

GATA8F07-R GAACAGGATGGGGAAAACTT versus AAAAC001-F CCCCGAAATTTACACCATCA

Matches = 11

Score = 7

NGATGGNGNAAANTT

est. tm = less than zero

DeltaG @37 degrees = -1.67 kcal/mole

3'-ACTACCACATTTAAAGCCCC-5'

x|||||x|x|||x||

5'-GAACAGGATGGGGAAAACTT-3'

GATA8F07-R GAACAGGATGGGGAAAACTT versus GATA43H01-F TAAAGGTTTATCCATGCTGTAGC

Matches = 14

Score = 8

AAGNTTTNNCCATNCTGTNN

est. tm = 16.6 oC

DeltaG @37 degrees = -4.04 kcal/mole

5'-TAAAGGTTTATCCATGCTGTAGC-3'

|||x|||xx||||x||||xx

3'-TTCAAAAGGGGTAGGACAAG-5'

ATA47C04N-R AACATATCCTTCCCCTTCCA versus GTTTT001-F GGGAGGGAGTAGGAGGTGTT

Matches = 14

Score = 8

NGGANGGNGNAGGANNTGTT

est. tm = 15.5 oC

DeltaG @37 degrees = -4.27 kcal/mole

5'-GGGAGGGAGTAGGAGGTGTT-3'

x|||x||x|x||||xx||||

3'-ACCTTCCCCTTCCTATACAA-5'

ATA47C04N-R AACATATCCTTCCCCTTCCA versus GTTTT001-F GGGAGGGAGTAGGAGGTGTT

Matches = 14

Score = 8

AACANNTCCTNCNCCNTCCN

est. tm = 17.2 oC

DeltaG @37 degrees = -4.67 kcal/mole

3'-TTGTGGAGGATGAGGGAGGG-5'

||||xx||||x|x||x|||x

5'-AACATATCCTTCCCCTTCCA-3'

GATA128C02N-R AAGGAACTGTTAGGGGCCT versus ATA47C04N-R AACATATCCTTCCCCTTCCA

Matches = 9

Score = 7

AACANNTCCTT

est. tm = 4.8 oC

DeltaG @37 degrees = -3.42 kcal/mole

5'-AACATATCCTTCCCCTTCCA-3'

||||xx|||||

3'-TCCGGGGATTGTCAAGGAA-5'

GATA66D01-R TAATTCAAATCTTTCCTGTCAGG versus GATA66D01-R TAATTCAAATCTTTCCTGTCAGG

Matches = 8

Score = 7

CCTGNCAGG

est. tm = 7.3 oC

DeltaG @37 degrees = -4.28 kcal/mole

3'-GGACTGTCCTTTCTAAACTTAAT-5'

||||x||||

5'-TAATTCAAATCTTTCCTGTCAGG-3'

GATA88G05-R GAGTTTTATTGGCCAAAGCA versus ATA6C09-R AAAACTCAAGCTCAGAAAGGC

Matches = 7

Score = 7

AAAACTC

est. tm = less than 0 oC

DeltaG @37 degrees = -3.13 kcal/mole

5'-AAAACTCAAGCTCAGAAAGGC-3'

|||||||

3'-ACGAAACCGGTTATTTTGAG-5'

ATA78D02N-R GGCAAGAGAACTCACGTAA versus GATA88G05-R GAGTTTTATTGGCCAAAGCA

Matches = 10

Score = 7

GAGTTNTNTTGNC

est. tm = less than 0 oC

DeltaG @37 degrees = -0.75 kcal/mole

5'-GAGTTTTATTGGCCAAAGCA-3'

|||||x|x|||x|

3'-AATGCACTCAAGAGAACGG-5'

GATA88G05-R GAGTTTTATTGGCCAAAGCA versus GATA2H09-F TTGCCACTGAAAATCATATCC

Matches = 11

Score = 7

TNGCCANTNAAANTC

est. tm = less than 0 oC

DeltaG @37 degrees = -1.05 kcal/mole

5'-TTGCCACTGAAAATCATATCC-3'

|x||||x|x|||x||

3'-ACGAAACCGGTTATTTTGAG-5'

GATA88G05-R GAGTTTTATTGGCCAAAGCA versus GGAA3F06-R CCAAATAAGACTCAGGACGC

Matches = 10

Score = 7

NCNAATAANACTC

est. tm = less than 0 oC

DeltaG @37 degrees = -1.72 kcal/mole

5'-CCAAATAAGACTCAGGACGC-3'

x|x|||||x||||

3'-ACGAAACCGGTTATTTTGAG-5'

GATA88G05-R GAGTTTTATTGGCCAAAGCA versus GATA73E11-R CTCTTAACTGATTTGGCCGA

Matches = 10

Score = 8

TNGGCCAAANCA

est. tm = 11.5 oC

DeltaG @37 degrees = -4.60 kcal/mole

3'-AGCCGGTTTAGTCAATTCTC-5'

|x|||||||x||

5'-GAGTTTTATTGGCCAAAGCA-3'

GATA4E11-R CAGACACAAATGCACACACA versus GATA50F11-F ATACATTTATATTTGCATCTGTGTG

Matches = 13

Score = 8

NACACANATGCANANANA

est. tm = 11.8 oC

DeltaG @37 degrees = -3.76 kcal/mole

3'-GTGTGTCTACGTTTATATTTACATA-5'

x|||||x|||||x|x|x|

5'-CAGACACAAATGCACACACA-3'

GATA4E11-R CAGACACAAATGCACACACA versus GATA152F05-R TTCTTTGTCTGTGTGCGTGT

Matches = 10

Score = 7

ANANGCACACANA

est. tm = less than zero

DeltaG @37 degrees = -2.60 kcal/mole

3'-TGTGCGTGTGTCTGTTTCTT-5'

|x|x|||||||x|

5'-CAGACACAAATGCACACACA-3'

GATA4E11-R CAGACACAAATGCACACACA versus GATA11C06N-R AGCGTTTGTGTGTGCATCTGT

Matches = 11

Score = 8

NGCNTTTGTGTNTG

est. tm = 19.7 oC

DeltaG @37 degrees = -5.44 kcal/mole

5'-AGCGTTTGTGTGTGCATCTGT-3'

x||x|||||||x||

3'-ACACACACGTAAACACAGAC-5'

GATA4E11-R CAGACACAAATGCACACACA versus GATA11C06N-R AGCGTTTGTGTGTGCATCTGT

Matches = 14

Score = 13

ACANATGCACACACA

est. tm = 42.3 oC

DeltaG @37 degrees = -11.00 kcal/mole

3'-TGTCTACGTGTGTGTTTGCGA-5'

|||x|||||||||||

5'-CAGACACAAATGCACACACA-3'

GATA4E11-R CAGACACAAATGCACACACA versus GATA165B12-R TTAAAATCATTTTCACTGTGTATGC

Matches = 8

Score = 7

GCANACACA

est. tm = 9.6 oC

DeltaG @37 degrees = -4.59 kcal/mole

3'-CGTATGTGTCACTTTTACTAAAATT-5'

|||x|||||

5'-CAGACACAAATGCACACACA-3'

GATA4D07-R CTCCATGATCCAGTCACCTC versus GATA68H04-R CCTGGATCATGAATTGCTAT

Matches = 11

Score = 8

NCTGGATCATGNAN

est. tm = 27.6 oC

DeltaG @37 degrees = -7.13 kcal/mole

5'-CCTGGATCATGAATTGCTAT-3'

x||||||||||x|x

3'-CTCCACTGACCTAGTACCTC-5'

GATA4D07-R CTCCATGATCCAGTCACCTC versus GGAA7G08NZ-R CTGGGCAATGGAGTGAGACT

Matches = 10

Score = 7

CTGGNNNATGGAG

est. tm = 14.8 oC

DeltaG @37 degrees = -4.54 kcal/mole

5'-CTGGGCAATGGAGTGAGACT-3'

||||xxx||||||

3'-CTCCACTGACCTAGTACCTC-5'

ATA27H09-R GAGCAGGATTTGTAACCCTG versus ATA27H09-R GAGCAGGATTTGTAACCCTG

Matches = 12

Score = 7

CAGGNTTNNNAANCCTG

est. tm = 6.0 oC

DeltaG @37 degrees = -2.46 kcal/mole

3'-GTCCCAATGTTTAGGACGAG-5'

||||x||xxx||x||||

5'-GAGCAGGATTTGTAACCCTG-3'

ATA27H09-R GAGCAGGATTTGTAACCCTG versus ATT077-F CACTGCCCCAGTGATACAAA

Matches = 10

Score = 8

TTTGTANCNCTG

est. tm = less than zero

DeltaG @37 degrees = -2.11 kcal/mole

3'-AAACATAGTGACCCCGTCAC-5'

||||||x|x|||

5'-GAGCAGGATTTGTAACCCTG-3'

ATA27H09-R GAGCAGGATTTGTAACCCTG versus GATA6E05-R GTTCTTCAGGGAAACAGAACC

Matches = 11

Score = 7

GGNTNTGTNNCCCTG

est. tm = 6.8 oC

DeltaG @37 degrees = -3.39 kcal/mole

3'-CCAAGACAAAGGGACTTCTTG-5'

||x|x|||xx|||||

5'-GAGCAGGATTTGTAACCCTG-3'

GATA7F05-R CTTACCTGGGTCTCCAGCTT versus GATA65C03N-R TAAGAACAAGTAAAAAAAGCTGG

Matches = 7

Score = 7

CCAGCTT

est. tm = 11.6 oC

DeltaG @37 degrees = -5.14 kcal/mole

3'-GGTCGAAAAAAATGAACAAGAAT-5'

|||||||

5'-CTTACCTGGGTCTCCAGCTT-3'

GATA29A05-F TTTTGTTTCTTGATCTGGGC versus GATA65C03N-R TAAGAACAAGTAAAAAAAGCTGG

Matches = 13

Score = 8

NNAGANCAAGNAANAAAA

est. tm = 7.7 oC

DeltaG @37 degrees = -2.33 kcal/mole

5'-TAAGAACAAGTAAAAAAAGCTGG-3'

xx|||x||||x||x||||

3'-CGGGTCTAGTTCTTTGTTTT-5'

GATA29F06Z-R ACACCTGCCTTTCTTTCCTG versus GATA65C03N-R TAAGAACAAGTAAAAAAAGCTGG

Matches = 12

Score = 7

CCNGCNTTTNTTNCNTG

est. tm = less than zero

DeltaG @37 degrees = greater than zero

3'-GGTCGAAAAAAATGAACAAGAAT-5'

||x||x|||x||x|x||

5'-ACACCTGCCTTTCTTTCCTG-3'

GATA65C03N-R TAAGAACAAGTAAAAAAAGCTGG versus GATA144D04-R ATCTTTCTGTACTTGCAGTGAGG

Matches = 14

Score = 7

ANCTTTNTNTACTTGNNNTNA

est. tm = less than 0 oC

DeltaG @37 degrees = > 0 kcal/mole

5'-ATCTTTCTGTACTTGCAGTGAGG-3'

|x||||x|x||||||xxx|x|

3'-GGTCGAAAAAAATGAACAAGAAT-5'

GATA30E06-R GGGATGGATGGAAAAGATTC versus GATA6B09-F TTGCATCCATACGGAAAGTC

Matches = 10

Score = 7

TTNCATCCATNCN

est. tm = 5.0 oC

DeltaG @37 degrees = -3.34 kcal/mole

5'-TTGCATCCATACGGAAAGTC-3'

||x|||||||x|x

3'-CTTAGAAAAGGTAGGTAGGG-5'

GATA30E06-R GGGATGGATGGAAAAGATTC versus GATA23B01N-R TTCCTAAGCATGAATTTTTACC

Matches = 9

Score = 7

GGNAAANATTC

est. tm = less than zero

DeltaG @37 degrees = -1.23 kcal/mole

3'-CCATTTTTAAGTACGAATCCTT-5'

||x|||x||||

5'-GGGATGGATGGAAAAGATTC-3'

GATA30E06-R GGGATGGATGGAAAAGATTC versus GGAT3F08-R TATCCATCCATCCATCAACC

Matches = 12

Score = 10

TNTCCATCCATCCN

est. tm = 34.4 oC

DeltaG @37 degrees = -8.73 kcal/mole

5'-TATCCATCCATCCATCAACC-3'

|x|||||||||||x

3'-CTTAGAAAAGGTAGGTAGGG-5'

GATA30E06-R GGGATGGATGGAAAAGATTC versus ATA28C05-R CCATCCCCTAAACCTCTCAT

Matches = 7

Score = 7

CCATCCC

est. tm = 12.2 oC

DeltaG @37 degrees = -5.22 kcal/mole

5'-CCATCCCCTAAACCTCTCAT-3'

|||||||

3'-CTTAGAAAAGGTAGGTAGGG-5'

GATA23D03N-R ATTCTTTGTCTCCCCAGTTG versus GATA3E10-R GGGGGAAAAAGAACACTGTA

Matches = 11

Score = 8

GGGNGANAAAGAAN

est. tm = 16.5 oC

DeltaG @37 degrees = -4.91 kcal/mole

5'-GGGGGAAAAAGAACACTGTA-3'

|||x||x||||||x

3'-GTTGACCCCTCTGTTTCTTA-5'

GATA23D03N-R ATTCTTTGTCTCCCCAGTTG versus ATA10H11-F GGTGACAGAGACTCTTGTCTCA

Matches = 10

Score = 7

GGNGACANAGANT

est. tm = less than 0 oC

DeltaG @37 degrees = -1.80 kcal/mole

5'-GGTGACAGAGACTCTTGTCTCA-3'

||x||||x|||x|

3'-GTTGACCCCTCTGTTTCTTA-5'

GATA23D03N-R ATTCTTTGTCTCCCCAGTTG versus GGAA3F06-F CAGAACAAACAAATGGGGAG

Matches = 10

Score = 9

CTCCCCANTTG

est. tm = 24.1 oC

DeltaG @37 degrees = -6.59 kcal/mole

3'-GAGGGGTAAACAAACAAGAC-5'

|||||||x|||

5'-ATTCTTTGTCTCCCCAGTTG-3'

GATA23D03N-R ATTCTTTGTCTCCCCAGTTG versus GTAT1A05-R TTGGTGACAAAGAAAGTCTCC

Matches = 11

Score = 7

NNGGNGACAAAGAAN

est. tm = 24.2 oC

DeltaG @37 degrees = -6.28 kcal/mole

5'-TTGGTGACAAAGAAAGTCTCC-3'

xx||x|||||||||x

3'-GTTGACCCCTCTGTTTCTTA-5'

ATT015-R TCACACTCTGGGGACTGTTG versus GATA23A02-R GACAGCAGACTGTGAGACTTC

Matches = 11

Score = 7

GNCNNCAGANTGTGA

est. tm = less than 0 oC

DeltaG @37 degrees = -1.93 kcal/mole

5'-GACAGCAGACTGTGAGACTTC-3'

|x|xx||||x|||||

3'-GTTGTCAGGGGTCTCACACT-5'

GATA158H04-R CCAGTCTTCCGTCACTATGC versus GATA23A02-R GACAGCAGACTGTGAGACTTC

Matches = 10

Score = 7

GACNGNAGACTGN

est. tm = 10.7 oC

DeltaG @37 degrees = -4.14 kcal/mole

5'-GACAGCAGACTGTGAGACTTC-3'

|||x|x||||||x

3'-CGTATCACTGCCTTCTGACC-5'

AGAT021-R TCCTGAATGAGGGGACACTT versus GATA28F03-F TTCAGGAGTTTAGCTTTCTATGC

Matches = 7

Score = 7

TTCAGGA

est. tm = 4.4 oC

DeltaG @37 degrees = -4.19 kcal/mole

5'-TTCAGGAGTTTAGCTTTCTATGC-3'

|||||||

3'-TTCACAGGGGAGTAAGTCCT-5'

GATA29B01-R AATATGGAACCAGCCCAAAT versus GATA73D01-R GATACCATATTCAACATGAAGAGG

Matches = 9

Score = 7

GNTNCCATATT

est. tm = less than 0 oC

DeltaG @37 degrees = -0.75 kcal/mole

5'-GATACCATATTCAACATGAAGAGG-3'

|x|x|||||||

3'-TAAACCCGACCAAGGTATAA-5'

GATA8B05-R CACTGTGATTTGCTGTTGGA versus GATA72H07-F AAAGCACAGTCCACACTCCT

Matches = 9

Score = 7

AAANCACAGTN

est. tm = 12.2 oC

DeltaG @37 degrees = -4.62 kcal/mole

5'-AAAGCACAGTCCACACTCCT-3'

|||x||||||x

3'-AGGTTGTCGTTTAGTGTCAC-5'

GATA8B05-R CACTGTGATTTGCTGTTGGA versus ATGT006Z-R CTGCACAGCAGAGTGAGACC

Matches = 11

Score = 7

CNGCANANCANAGTG

est. tm = less than 0 oC

DeltaG @37 degrees = -1.59 kcal/mole

5'-CTGCACAGCAGAGTGAGACC-3'

|x|||x|x||x||||

3'-AGGTTGTCGTTTAGTGTCAC-5'

GATA8B05-R CACTGTGATTTGCTGTTGGA versus GATA188F04-R TACAGTAAATCACTTGGTAGGAGA

Matches = 12

Score = 7

NACAGNAAATCACNNNG

est. tm = 13.5 oC

DeltaG @37 degrees = -3.58 kcal/mole

5'-TACAGTAAATCACTTGGTAGGAGA-3'

x||||x|||||||xxx|

3'-AGGTTGTCGTTTAGTGTCAC-5'

GATA24H01N-R CATAATTGCTTGGGCAATTC versus GATA6F06-R ACCCAATTATGGTGTTGTTACC

Matches = 9

Score = 7

ANNCAATTATG

est. tm = less than 0 oC

DeltaG @37 degrees = -1.40 kcal/mole

5'-ACCCAATTATGGTGTTGTTACC-3'

|xx||||||||

3'-CTTAACGGGTTCGTTAATAC-5'

ATA2A03-R ACACCATCATGGCGCATG versus GATA6F06-R ACCCAATTATGGTGTTGTTACC

Matches = 11

Score = 7

NCNCNATNATGGTGT

est. tm = 1.2 oC

DeltaG @37 degrees = -2.55 kcal/mole

5'-ACCCAATTATGGTGTTGTTACC-3'

x|x|x||x|||||||

3'-GTACGCGGTACTACCACA-5'

GATA6F06-R ACCCAATTATGGTGTTGTTACC versus GATA81D12-R TAATGTACCTGGTACCAAAAACA

Matches = 10

Score = 7

TGNTNTTGNTACC

est. tm = less than zero

DeltaG @37 degrees = -0.95 kcal/mole

3'-ACAAAAACCATGGTCCATGTAAT-5'

||x|x|||x||||

5'-ACCCAATTATGGTGTTGTTACC-3'

GATA68H04-F ACAAGAACAGCATGGGGTAA versus GATA6F06-R ACCCAATTATGGTGTTGTTACC

Matches = 13

Score = 8

ACCCNATNNTGNTNTTGT

est. tm = 3.2 oC

DeltaG @37 degrees = -2.25 kcal/mole

5'-ACCCAATTATGGTGTTGTTACC-3'

||||x||xx||x|x||||

3'-AATGGGGTACGACAAGAACA-5'

GATA104-F CCTCCATAATTGTGTGAGCC versus GATA6F06-R ACCCAATTATGGTGTTGTTACC

Matches = 12

Score = 9

ACNCAATTATGGNGN

est. tm = 16.3 oC

DeltaG @37 degrees = -4.52 kcal/mole

5'-ACCCAATTATGGTGTTGTTACC-3'

||x|||||||||x|x

3'-CCGAGTGTGTTAATACCTCC-5'

UT7544-R CATAATAGGTTTGAGGTATCT versus GATA6F06-R ACCCAATTATGGTGTTGTTACC

Matches = 9

Score = 7

ANCCNATTATG

est. tm = less than 0 oC

DeltaG @37 degrees = -0.75 kcal/mole

5'-ACCCAATTATGGTGTTGTTACC-3'

|x||x||||||

3'-TCTATGGAGTTTGGATAATAC-5'

GATA7F05-R CTTACCTGGGTCTCCAGCTT versus ATA25F04-R AGACCCAGTTGATGCAATGT

Matches = 10

Score = 7

AGACCCAGNTNAN

est. tm = 13.5 oC

DeltaG @37 degrees = -4.97 kcal/mole

5'-AGACCCAGTTGATGCAATGT-3'

||||||||x|x|x

3'-TTCGACCTCTGGGTCCATTC-5'

GATA84B12-R ATGAGGACGGTTGACATCTG versus ACT1A01-F GTCCTCATCTGTAAAACGGG

Matches = 8

Score = 8

GTCCTCAT

est. tm = 15.1 oC

DeltaG @37 degrees = -5.28 kcal/mole

5'-GTCCTCATCTGTAAAACGGG-3'

||||||||

3'-GTCTACAGTTGGCAGGAGTA-5'

GATA84B12-R ATGAGGACGGTTGACATCTG versus GATA27A03-R AGATGCCGCCTGTACTAATG

Matches = 13

Score = 7

AGATGNCNNCNGTNCTNAT

est. tm = less than 0 oC

DeltaG @37 degrees = > 0 kcal/mole

5'-AGATGCCGCCTGTACTAATG-3'

|||||x|xx|x||x||x||

3'-GTCTACAGTTGGCAGGAGTA-5'

ATA34G06-R GTTGTTTGCCCTACAACCTG versus ATA34G06-R GTTGTTTGCCCTACAACCTG

Matches = 12

Score = 7

GTTGTNNGNCNNACAAC

est. tm = 5.2 oC

DeltaG @37 degrees = -2.04 kcal/mole

5'-GTTGTTTGCCCTACAACCTG-3'

|||||xx|x|xx|||||

3'-GTCCAACATCCCGTTTGTTG-5'

GATA3C02-R CTGGCCCCATCTCTCTCTAT versus GATA4H03-R TCCAATGGAAAGAAATGGAG

Matches = 12

Score = 8

CNCCATNTCTNTCNAT

est. tm = less than zero

DeltaG @37 degrees = -0.85 kcal/mole

3'-GAGGTAAAGAAAGGTAACCT-5'

|x||||x|||x||x||

5'-CTGGCCCCATCTCTCTCTAT-3'

GATA3C02-R CTGGCCCCATCTCTCTCTAT versus GATA23F05-F ATGGTATTAGGAGATGGGGC

Matches = 12

Score = 7

GCCCCATCTCNNNNTAN

est. tm = 28.8 oC

DeltaG @37 degrees = -7.21 kcal/mole

3'-CGGGGTAGAGGATTATGGTA-5'

||||||||||xxxx||x

5'-CTGGCCCCATCTCTCTCTAT-3'

GATA3C02-R CTGGCCCCATCTCTCTCTAT versus GATA48D07-F TGGACAACAGAGTGAGATGC

Matches = 11

Score = 8

NCATCTCNCTCTNT

est. tm = 11.5 oC

DeltaG @37 degrees = -3.97 kcal/mole

3'-CGTAGAGTGAGACAACAGGT-5'

x||||||x||||x|

5'-CTGGCCCCATCTCTCTCTAT-3'

GATA3C02-R CTGGCCCCATCTCTCTCTAT versus GATA22G12-R GGGTGACAGAGTGAGATGTG

Matches = 12

Score = 9

CNCATCTCNCTCTNT

est. tm = 6.1 oC

DeltaG @37 degrees = -2.72 kcal/mole

3'-GTGTAGAGTGAGACAGTGGG-5'

|x||||||x||||x|

5'-CTGGCCCCATCTCTCTCTAT-3'

GATA3C02-R CTGGCCCCATCTCTCTCTAT versus AAAT007-R AGGCTCATCCACAGAGATGG

Matches = 11

Score = 8

CCATCTCTNTNNAT

est. tm = 7.4 oC

DeltaG @37 degrees = -3.10 kcal/mole

3'-GGTAGAGACACCTACTCGGA-5'

||||||||x|xx||

5'-CTGGCCCCATCTCTCTCTAT-3'

TTTA040-R GGGTGGAAAGAAGGGCTTTA versus GATA30F10A-R TCTTATCTCCACCCACCAGA

Matches = 11

Score = 8

NCTTNTNTCCACCC

est. tm = 21.0 oC

DeltaG @37 degrees = -5.91 kcal/mole

5'-TCTTATCTCCACCCACCAGA-3'

x|||x|x|||||||

3'-ATTTCGGGAAGAAAGGTGGG-5'

TTTA040-R GGGTGGAAAGAAGGGCTTTA versus GATA30F10-R TCTTATCTCCACCCACCAGA

Matches = 11

Score = 8

NCTTNTNTCCACCC

est. tm = 21.0 oC

DeltaG @37 degrees = -5.91 kcal/mole

5'-TCTTATCTCCACCCACCAGA-3'

x|||x|x|||||||

3'-ATTTCGGGAAGAAAGGTGGG-5'

ATA82B02N-R AGAGGCTGAGGTGAAGGATT versus 4PTEL04-R GGTCTAAATCAATGACCTAAGC

Matches = 12

Score = 8

GCTNAGGTNANNGATT

est. tm = 8.5 oC

DeltaG @37 degrees = -3.19 kcal/mole

3'-CGAATCCAGTAACTAAATCTGG-5'

|||x||||x|xx||||

5'-AGAGGCTGAGGTGAAGGATT-3'

AFMb035xb9-R CGTTCCAACTGTCACCAGC versus ATT015-R TCACACTCTGGGGACTGTTG

Matches = 11

Score = 8

CAACNGTCNCCAGN

est. tm = 19.8 oC

DeltaG @37 degrees = -5.56 kcal/mole

3'-GTTGTCAGGGGTCTCACACT-5'

||||x|||x||||x

5'-CGTTCCAACTGTCACCAGC-3'

ATT015-R TCACACTCTGGGGACTGTTG versus GATA27-R AGTGTGAACATTATTTCATTCTGG

Matches = 7

Score = 7

AGTGTGA

est. tm = 6.3 oC

DeltaG @37 degrees = -4.40 kcal/mole

5'-AGTGTGAACATTATTTCATTCTGG-3'

|||||||

3'-GTTGTCAGGGGTCTCACACT-5'

ATT015-R TCACACTCTGGGGACTGTTG versus GATA64A09-R CAGAGTGAGACCCTGTTTCA

Matches = 9

Score = 8

CAGAGTGNGA

est. tm = 11.0 oC

DeltaG @37 degrees = -4.36 kcal/mole

5'-CAGAGTGAGACCCTGTTTCA-3'

|||||||x||

3'-GTTGTCAGGGGTCTCACACT-5'

ATT015-R TCACACTCTGGGGACTGTTG versus GATA26D02N-R AGTGTGATATGAATAATGAGCTGC

Matches = 7

Score = 7

AGTGTGA

est. tm = 6.3 oC

DeltaG @37 degrees = -4.40 kcal/mole

5'-AGTGTGATATGAATAATGAGCTGC-3'

|||||||

3'-GTTGTCAGGGGTCTCACACT-5'

ATT015-R TCACACTCTGGGGACTGTTG versus ATA26D07-F AGAGTGAGATTCTGTCTCAATTAA

Matches = 8

Score = 7

AGAGTGNGA

est. tm = less than 0 oC

DeltaG @37 degrees = -3.13 kcal/mole

5'-AGAGTGAGATTCTGTCTCAATTAA-3'

||||||x||

3'-GTTGTCAGGGGTCTCACACT-5'

ATA27C07-R GCAACAAACCTGCACATTCT versus GATA107-R GTCTCTGCATTTGCTGGTTT

Matches = 11

Score = 7

AAACCNGCANATNCN

est. tm = 6.4 oC

DeltaG @37 degrees = -3.43 kcal/mole

3'-TTTGGTCGTTTACGTCTCTG-5'

|||||x|||x||x|x

5'-GCAACAAACCTGCACATTCT-3'

ATA27C07-R GCAACAAACCTGCACATTCT versus CTAT014-R CAGCTTTCAAACAGTGCAGGT

Matches = 10

Score = 7

ACCTGCACNNTNT

est. tm = 10.0 oC

DeltaG @37 degrees = -4.26 kcal/mole

3'-TGGACGTGACAAACTTTCGAC-5'

||||||||xx|x|

5'-GCAACAAACCTGCACATTCT-3'

ATA27C07-R GCAACAAACCTGCACATTCT versus GATG011-F CTCAAAGCCTGTGGAGGTCT

Matches = 11

Score = 7

ANACCTNCACANNCT

est. tm = less than zero

DeltaG @37 degrees = -2.35 kcal/mole

3'-TCTGGAGGTGTCCGAAACTC-5'

|x||||x||||xx||

5'-GCAACAAACCTGCACATTCT-3'

ATA27C07-R GCAACAAACCTGCACATTCT versus GATA32B03-R AGGTATGGTGCCACACACTT

Matches = 9

Score = 7

AGGTNTGNTGC

est. tm = 4.8 oC

DeltaG @37 degrees = -3.83 kcal/mole

5'-AGGTATGGTGCCACACACTT-3'

||||x||x|||

3'-TCTTACACGTCCAAACAACG-5'

ATA2A03-R ACACCATCATGGCGCATG versus GATA104-F CCTCCATAATTGTGTGAGCC

Matches = 11

Score = 7

NCNCCATNATNGTGT

est. tm = 1.2 oC

DeltaG @37 degrees = -2.55 kcal/mole

5'-CCTCCATAATTGTGTGAGCC-3'

x|x||||x||x||||

3'-GTACGCGGTACTACCACA-5'

ATA2A03-R ACACCATCATGGCGCATG versus AAAT007-F GCCAACATGGTGAAAACCTAA

Matches = 10

Score = 7

GCCANNATGGTGN

est. tm = 27.0 oC

DeltaG @37 degrees = -7.17 kcal/mole

5'-GCCAACATGGTGAAAACCTAA-3'

||||xx||||||x

3'-GTACGCGGTACTACCACA-5'

GATA62A12-R GCCAGATACATGGCTAAGGA versus GATA90G11-R ATCTGGCAATACTTCGCAAG

Matches = 7

Score = 7

ATCTGGC

est. tm = 10.8 oC

DeltaG @37 degrees = -5.03 kcal/mole

5'-ATCTGGCAATACTTCGCAAG-3'

|||||||

3'-AGGAATCGGTACATAGACCG-5'

GATA107-R GTCTCTGCATTTGCTGGTTT versus GGAA3F06-F CAGAACAAACAAATGGGGAG

Matches = 13

Score = 8

CTCNNCATTTGNTNGTTN

est. tm = 12.3 oC

DeltaG @37 degrees = -3.26 kcal/mole

3'-GAGGGGTAAACAAACAAGAC-5'

|||xx||||||x|x|||x

5'-GTCTCTGCATTTGCTGGTTT-3'

GATA21C12-F AAACAATCAAAGGCCCAGG versus GATA107-R GTCTCTGCATTTGCTGGTTT

Matches = 13

Score = 7

AAACNANCAAANGCNNAGN

est. tm = 4.4 oC

DeltaG @37 degrees = -2.12 kcal/mole

3'-TTTGGTCGTTTACGTCTCTG-5'

||||x|x||||x||xx||x

5'-AAACAATCAAAGGCCCAGG-3'

GATA27G03-R AAGGGATTTTAGGAACTGATACG versus GATA41G07-R AAAATCCTTTCAACAAATAGAAGC

Matches = 9

Score = 8

AAAATCCNTT

est. tm = 1.0 oC

DeltaG @37 degrees = -2.80 kcal/mole

5'-AAAATCCTTTCAACAAATAGAAGC-3'

|||||||x||

3'-GCATAGTCAAGGATTTTAGGGAA-5'

GATA128C02N-F AGACCCCAAAATTACTTGAG versus GATA27G03-R AAGGGATTTTAGGAACTGATACG

Matches = 12

Score = 7

AAGNNATTTTNGGNNCT

est. tm = less than 0 oC

DeltaG @37 degrees = -0.49 kcal/mole

5'-AAGGGATTTTAGGAACTGATACG-3'

|||xx|||||x||xx||

3'-GAGTTCATTAAAACCCCAGA-5'

GATA31A10-F TCTAAACTCCTTTGCACAGTC versus GATA27G03-R AAGGGATTTTAGGAACTGATACG

Matches = 10

Score = 7

AANGGANTTTAGN

est. tm = 1.1 oC

DeltaG @37 degrees = -2.58 kcal/mole

5'-AAGGGATTTTAGGAACTGATACG-3'

||x|||x|||||x

3'-CTGACACGTTTCCTCAAATCT-5'

GATA42H02-R AAAGCCAAAAGATGATGCAA versus GATA29A01-F CTGTGCCTCTATTGCCTCAT

Matches = 8

Score = 7

ATGANGCAA

est. tm = 0.6 oC

DeltaG @37 degrees = -3.36 kcal/mole

3'-TACTCCGTTATCTCCGTGTC-5'

||||x||||

5'-AAAGCCAAAAGATGATGCAA-3'

GATA42H02-R AAAGCCAAAAGATGATGCAA versus GATA73E11-F TTGGTGGTGTCATCCTCTTT

Matches = 10

Score = 7

AAAGANGATGNNA

est. tm = less than zero

DeltaG @37 degrees = -1.36 kcal/mole

3'-TTTCTCCTACTGTGGTGGTT-5'

|||||x||||xx|

5'-AAAGCCAAAAGATGATGCAA-3'

GATA62A04-R TAAGGCATGTCTCGGAGCTA versus GATA5B02-R CAGACATTCTTTATTCTTTACCTCC

Matches = 10

Score = 7

NAGACATNCNTTA

est. tm = less than 0 oC

DeltaG @37 degrees = -2.11 kcal/mole

5'-CAGACATTCTTTATTCTTTACCTCC-3'

x||||||x|x|||

3'-ATCGAGGCTCTGTACGGAAT-5'

GATA145D10N-R TTGAGCCCAGAAGTTTGAG versus GATA46A12-F CTTGTGGGCTGTAGTTTGCT

Matches = 10

Score = 7

CTTNTGGGCTNNA

est. tm = 9.4 oC

DeltaG @37 degrees = -4.08 kcal/mole

5'-CTTGTGGGCTGTAGTTTGCT-3'

|||x||||||xx|

3'-GAGTTTGAAGACCCGAGTT-5'

GATA3E10-R GGGGGAAAAAGAACACTGTA versus GGAA29H03N-R AGTTGACTCTTTCCCCAACTA

Matches = 12

Score = 7

AGTNNNCTNTTTCCCCN

est. tm = 20.1 oC

DeltaG @37 degrees = -5.44 kcal/mole

5'-AGTTGACTCTTTCCCCAACTA-3'

|||xxx||x|||||||x

3'-ATGTCACAAGAAAAAGGGGG-5'

GATA7C06-R TAGGATTTTACTATATTCCCCAGG versus GATA41G07-R AAAATCCTTTCAACAAATAGAAGC

Matches = 8

Score = 7

AAAATCCTN

est. tm = 12.1 oC

DeltaG @37 degrees = -4.79 kcal/mole

5'-AAAATCCTTTCAACAAATAGAAGC-3'

||||||||x

3'-GGACCCCTTATATCATTTTAGGAT-5'

GATA6G12-F AGCCTGAGCAAAACAGTGAA versus GATA7C06-R TAGGATTTTACTATATTCCCCAGG

Matches = 13

Score = 8

CCTGNGNAANANAGTNAA

est. tm = less than zero

DeltaG @37 degrees = -0.28 kcal/mole

3'-GGACCCCTTATATCATTTTAGGAT-5'

||||x|x||x|x|||x||

5'-AGCCTGAGCAAAACAGTGAA-3'

ATA29A06N-F AGGCAACATAGTGAGACCCCA versus GATA7C06-R TAGGATTTTACTATATTCCCCAGG

Matches = 14

Score = 7

TNGGNTNTNACTATNTTNCCN

est. tm = less than 0 oC

DeltaG @37 degrees = > 0 kcal/mole

5'-TAGGATTTTACTATATTCCCCAGG-3'

|x||x|x|x|||||x||x||x

3'-ACCCCAGAGTGATACAACGGA-5'

GGAA2A03-F CCTGGGCAACAGAATAAGAT versus GATA7C06-R TAGGATTTTACTATATTCCCCAGG

Matches = 15

Score = 10

CCTGGGNAANANANTAANAT

est. tm = 6.3 oC

DeltaG @37 degrees = -2.10 kcal/mole

3'-GGACCCCTTATATCATTTTAGGAT-5'

||||||x||x|x|x|||x||

5'-CCTGGGCAACAGAATAAGAT-3'

AAAT007-F GCCAACATGGTGAAAACCTAA versus GATA7C06-R TAGGATTTTACTATATTCCCCAGG

Matches = 14

Score = 8

TAGGNTTTNACNATNTTNNC

est. tm = less than 0 oC

DeltaG @37 degrees = > 0 kcal/mole

5'-TAGGATTTTACTATATTCCCCAGG-3'

||||x|||x||x||x||xx|

3'-AATCCAAAAGTGGTACAACCG-5'

AGAT120-F CTGGGCAACAAAGTGAGACC versus GATA7C06-R TAGGATTTTACTATATTCCCCAGG

Matches = 14

Score = 8

GNTNTNACTNTNTTNCCCAG

est. tm = less than zero

DeltaG @37 degrees = -0.19 kcal/mole

5'-TAGGATTTTACTATATTCCCCAGG-3'

|x|x|x|||x|x||x|||||

3'-CCAGAGTGAAACAACGGGTC-5'

ATA10H11-R CATTCTGGTTGGGGAACATA versus GATA7C06-R TAGGATTTTACTATATTCCCCAGG

Matches = 10

Score = 7

NNTGGGGAANATA

est. tm = 15.1 oC

DeltaG @37 degrees = -4.85 kcal/mole

3'-GGACCCCTTATATCATTTTAGGAT-5'

xx|||||||x|||

5'-CATTCTGGTTGGGGAACATA-3'

GTTTT001-R AGCCTGGGTGACAGAGTGAA versus GATA7C06-R TAGGATTTTACTATATTCCCCAGG

Matches = 13

Score = 8

CCTGGGNNANANAGTNAA

est. tm = 6.9 oC

DeltaG @37 degrees = -2.92 kcal/mole

3'-GGACCCCTTATATCATTTTAGGAT-5'

||||||xx|x|x|||x||

5'-AGCCTGGGTGACAGAGTGAA-3'

TTAT023z-F TGTTGGGCTTCACCATACCT versus GATA67D03-R GTTACAGTACCTATGGTCATGCC

Matches = 11

Score = 7

GGCNTNACCATANNT

est. tm = 1.2 oC

DeltaG @37 degrees = -2.45 kcal/mole

3'-CCGTACTGGTATCCATGACATTG-5'

|||x|x||||||xx|

5'-TGTTGGGCTTCACCATACCT-3'

GATA4G12-R GCCATCTGTACTGTTCCCAG versus GATA67D03-R GTTACAGTACCTATGGTCATGCC

Matches = 12

Score = 7

GNNACAGTACNNATGGN

est. tm = 17.0 oC

DeltaG @37 degrees = -4.51 kcal/mole

5'-GTTACAGTACCTATGGTCATGCC-3'

|xx|||||||xx||||x

3'-GACCCTTGTCATGTCTACCG-5'

GATA52A12-R AAAAGCCTCCAGTGGGATAT versus TTA032Z-R CCTCAAACTTCCCACAGGAG

Matches = 11

Score = 8

CTCCNGTGGGANNT

est. tm = 17.2 oC

DeltaG @37 degrees = -5.18 kcal/mole

3'-GAGGACACCCTTCAAACTCC-5'

||||x||||||xx|

5'-AAAAGCCTCCAGTGGGATAT-3'

GATA52A12-R AAAAGCCTCCAGTGGGATAT versus GATA8G10-R GGCTTTTTCTTCCTTTACCG

Matches = 7

Score = 7

GGCTTTT

est. tm = 7.4 oC

DeltaG @37 degrees = -4.42 kcal/mole

5'-GGCTTTTTCTTCCTTTACCG-3'

|||||||

3'-TATAGGGTGACCTCCGAAAA-5'

GATA52A12-R AAAAGCCTCCAGTGGGATAT versus ATA7D07-F ATCCCACAGGATGCCTATTT

Matches = 14

Score = 10

ATCCCACNGGANGCNTNT

est. tm = 20.0 oC

DeltaG @37 degrees = -5.41 kcal/mole

5'-ATCCCACAGGATGCCTATTT-3'

|||||||x|||x||x|x|

3'-TATAGGGTGACCTCCGAAAA-5'

GATA3H06-R CCTGGGGGTAAGAGGAGATA versus GATA184A08-R GCACCTCTAACCCCCATATT

Matches = 13

Score = 8

NCNCCTCTNACCCCCANN

est. tm = 36.6 oC

DeltaG @37 degrees = -9.28 kcal/mole

5'-GCACCTCTAACCCCCATATT-3'

x|x|||||x|||||||xx

3'-ATAGAGGAGAATGGGGGTCC-5'

GATA3H06-R CCTGGGGGTAAGAGGAGATA versus GATA63D12-R AATATTGACTTTCTCTTGCTACCC

Matches = 11

Score = 7

GGGTANNANGAGANA

est. tm = less than zero

DeltaG @37 degrees = -1.80 kcal/mole

3'-CCCATCGTTCTCTTTCAGTTATAA-5'

|||||xx|x||||x|

5'-CCTGGGGGTAAGAGGAGATA-3'

GATA62A04-R TAAGGCATGTCTCGGAGCTA versus AGC001b-F ATGCCTTATGGCACTGGACT

Matches = 8

Score = 8

ATGCCTTA

est. tm = 12.8 oC

DeltaG @37 degrees = -4.98 kcal/mole

5'-ATGCCTTATGGCACTGGACT-3'

||||||||

3'-ATCGAGGCTCTGTACGGAAT-5'

ATA23A10-R TTCTAGCTTCCCCCTATGCT versus GATA6A05-F CTGCCAGAGAATAGGGTGAA

Matches = 11

Score = 9

TTCNCCCTATNCT

est. tm = 8.0 oC

DeltaG @37 degrees = -3.51 kcal/mole

3'-AAGTGGGATAAGAGACCGTC-5'

|||x||||||x||

5'-TTCTAGCTTCCCCCTATGCT-3'

ATA23A10-R TTCTAGCTTCCCCCTATGCT versus GATA22G12-F AAAGCTAGAAGGAGCTGGCT

Matches = 9

Score = 8

NAAGCTAGAA

est. tm = 20.0 oC

DeltaG @37 degrees = -5.79 kcal/mole

5'-AAAGCTAGAAGGAGCTGGCT-3'

x|||||||||

3'-TCGTATCCCCCTTCGATCTT-5'

ATA23A10-R TTCTAGCTTCCCCCTATGCT versus GATA31E08-F AGGGGAGAAGGCTAGAATGA

Matches = 12

Score = 7

ANNGGNGNANGCTAGAA

est. tm = less than 0 oC

DeltaG @37 degrees = -0.72 kcal/mole

5'-AGGGGAGAAGGCTAGAATGA-3'

|xx||x|x|x|||||||

3'-TCGTATCCCCCTTCGATCTT-5'

GATA13G11-R GGGTTCTGCAGAGAAACAGA versus GATA11A11-R TCTGGAAAACCCTAATTCTCC

Matches = 10

Score = 8

TCTGNANAACCC

est. tm = 8.8 oC

DeltaG @37 degrees = -4.01 kcal/mole

5'-TCTGGAAAACCCTAATTCTCC-3'

||||x|x|||||

3'-AGACAAAGAGACGTCTTGGG-5'

GATA11A11-R TCTGGAAAACCCTAATTCTCC versus GATA8B01-R ATGGATAAATTGAGTTTCCCC

Matches = 13

Score = 7

NGGNAAACNCNANTTNTCC

est. tm = less than zero

DeltaG @37 degrees = -0.75 kcal/mole

3'-CCCCTTTGAGTTAAATAGGTA-5'

x||x||||x|x|x||x|||

5'-TCTGGAAAACCCTAATTCTCC-3'

GATA165G02N-F CAGGATTTTTCAGAAAGACA versus GATA11A11-R TCTGGAAAACCCTAATTCTCC

Matches = 11

Score = 8

TCTGNAAAANCCTN

est. tm = 13.8 oC

DeltaG @37 degrees = -4.45 kcal/mole

5'-TCTGGAAAACCCTAATTCTCC-3'

||||x||||x|||x

3'-ACAGAAAGACTTTTTAGGAC-5'

GATA11A11-R TCTGGAAAACCCTAATTCTCC versus ATA19H08-F TTCCAGAGTATTTGCTTAAGAGG

Matches = 7

Score = 7

TTCCAGA

est. tm = 4.4 oC

DeltaG @37 degrees = -4.19 kcal/mole

5'-TTCCAGAGTATTTGCTTAAGAGG-3'

|||||||

3'-CCTCTTAATCCCAAAAGGTCT-5'

GGAT3F08-F TTTTCCAGAAGCTCAGATCC versus GATA11A11-R TCTGGAAAACCCTAATTCTCC

Matches = 9

Score = 9

TCTGGAAAA

est. tm = 18.9 oC

DeltaG @37 degrees = -5.66 kcal/mole

5'-TCTGGAAAACCCTAATTCTCC-3'

|||||||||

3'-CCTAGACTCGAAGACCTTTT-5'

GATA144D04-F AGCCAGAAGGAGGAGGATTA versus GATA11A11-R TCTGGAAAACCCTAATTCTCC

Matches = 8

Score = 7

GGAGNATTA

est. tm = less than zero

DeltaG @37 degrees = -1.98 kcal/mole

3'-CCTCTTAATCCCAAAAGGTCT-5'

||||x||||

5'-AGCCAGAAGGAGGAGGATTA-3'

GATA48E02-R CAGATTTCTGCTTTCCCAGA versus GATA11A11-R TCTGGAAAACCCTAATTCTCC

Matches = 14

Score = 8

TCTGGNAAANCNNAANTCTN

est. tm = 9.9 oC

DeltaG @37 degrees = -2.88 kcal/mole

5'-TCTGGAAAACCCTAATTCTCC-3'

|||||x|||x|xx||x|||x

3'-AGACCCTTTCGTCTTTAGAC-5'

AAAT072-R ACTCCACCCAGGAAGTCCA versus GATA88F09-R TTGGGTTTCCTGACTTGTGT

Matches = 13

Score = 7

ACNCNANNCAGGAANNCCA

est. tm = 1.5 oC

DeltaG @37 degrees = -1.84 kcal/mole

3'-TGTGTTCAGTCCTTTGGGTT-5'

||x|x|xx||||||xx|||

5'-ACTCCACCCAGGAAGTCCA-3'

AAAT072-R ACTCCACCCAGGAAGTCCA versus GATA87G01-R TAGATTATCTAAATGGTGGATTTCC

Matches = 8

Score = 7

GGAANTCCA

est. tm = 3.7 oC

DeltaG @37 degrees = -3.83 kcal/mole

3'-CCTTTAGGTGGTAAATCTATTAGAT-5'

||||x||||

5'-ACTCCACCCAGGAAGTCCA-3'

AAAT072-R ACTCCACCCAGGAAGTCCA versus ATT023-F CTGGCTGCAGTCTCGTCATA

Matches = 9

Score = 7

CTGGNTGNAGT

est. tm = less than 0 oC

DeltaG @37 degrees = -2.88 kcal/mole

5'-CTGGCTGCAGTCTCGTCATA-3'

||||x||x|||

3'-ACCTGAAGGACCCACCTCA-5'

AAAT072-R ACTCCACCCAGGAAGTCCA versus ATA33B03Z-R TAGTATCCACTTCCTGGGGT

Matches = 11

Score = 7

NNCCCAGGAAGTNNA

est. tm = 24.4 oC

DeltaG @37 degrees = -6.45 kcal/mole

3'-TGGGGTCCTTCACCTATGAT-5'

xx||||||||||xx|

5'-ACTCCACCCAGGAAGTCCA-3'

TTA032Z-R CCTCAAACTTCCCACAGGAG versus GATA116B01N-F ATGGCCTATTGTGGGATCTT

Matches = 11

Score = 7

AANNTCCCACANNAG

est. tm = 11.3 oC

DeltaG @37 degrees = -3.83 kcal/mole

3'-TTCTAGGGTGTTATCCGGTA-5'

||xx|||||||xx||

5'-CCTCAAACTTCCCACAGGAG-3'

ATA50C05-R GCATAATGCACATGCCTGTA versus ATA50C05-R GCATAATGCACATGCCTGTA

Matches = 8

Score = 7

GCATNATGC

est. tm = 8.5 oC

DeltaG @37 degrees = -4.26 kcal/mole

5'-GCATAATGCACATGCCTGTA-3'

||||x||||

3'-ATGTCCGTACACGTAATACG-5'

ATA50C05-R GCATAATGCACATGCCTGTA versus GATA43H03N-R ATTTGAACAGAGGCATGTAC

Matches = 10

Score = 7

GNACATGCCTNTN

est. tm = 15.8 oC

DeltaG @37 degrees = -5.17 kcal/mole

3'-CATGTACGGAGACAAGTTTA-5'

|x||||||||x|x

5'-GCATAATGCACATGCCTGTA-3'

ATA50C05-R GCATAATGCACATGCCTGTA versus GATA25A04-R GTGCATTATGGGGACCATTA

Matches = 10

Score = 9

GTGCATTATGN

est. tm = 28.7 oC

DeltaG @37 degrees = -7.35 kcal/mole

5'-GTGCATTATGGGGACCATTA-3'

||||||||||x

3'-ATGTCCGTACACGTAATACG-5'

ATA50C05-R GCATAATGCACATGCCTGTA versus AAT034-R CTGGGATTACAGGCGTGAGT

Matches = 10

Score = 7

NCNCANGCCTGTA

est. tm = 11.3 oC

DeltaG @37 degrees = -4.43 kcal/mole

3'-TGAGTGCGGACATTAGGGTC-5'

x|x||x|||||||

5'-GCATAATGCACATGCCTGTA-3'

GATA163B10N-R TGGAGACAGCATGTGATTTG versus GATA84E11-R CACACATGCTGTGTCTCTCA

Matches = 12

Score = 7

NNCACATGCTGTNTCNN

est. tm = 32.2 oC

DeltaG @37 degrees = -8.07 kcal/mole

5'-CACACATGCTGTGTCTCTCA-3'

xx||||||||||x||xx

3'-GTTTAGTGTACGACAGAGGT-5'

GATA61E03-R GGTATTTTTTGCCCACATGA versus ATA79C10-R GATGAGTGCAAAAAACCACC

Matches = 13

Score = 7

NATGNGNGCAAAAAANNNC

est. tm = 9.2 oC

DeltaG @37 degrees = -2.38 kcal/mole

5'-GATGAGTGCAAAAAACCACC-3'

x|||x|x||||||||xxx|

3'-AGTACACCCGTTTTTTATGG-5'

GATA11E02N-R AGTGCTAGACTGGGAGAAGA versus GATA6E05-F ATTGCATGGCAACTCTTCTC

Matches = 7

Score = 7

GAGAAGA

est. tm = 2.1 oC

DeltaG @37 degrees = -3.57 kcal/mole

3'-CTCTTCTCAACGGTACGTTA-5'

|||||||

5'-AGTGCTAGACTGGGAGAAGA-3'

GATA11E02N-R AGTGCTAGACTGGGAGAAGA versus GATA25A04-F TAGCACTTGAGCACACATGG

Matches = 7

Score = 7

TAGCACT

est. tm = 5.5 oC

DeltaG @37 degrees = -4.29 kcal/mole

5'-TAGCACTTGAGCACACATGG-3'

|||||||

3'-AGAAGAGGGTCAGATCGTGA-5'

GATA13G11-R GGGTTCTGCAGAGAAACAGA versus ATA28B11-R CGCTCATTTTATCTACCTAACC

Matches = 13

Score = 7

GGTTNNGNAGANAAANNGA

est. tm = less than zero

DeltaG @37 degrees = -0.50 kcal/mole

3'-CCAATCCATCTATTTTACTCGC-5'

||||xx|x|||x|||xx||

5'-GGGTTCTGCAGAGAAACAGA-3'

ATA28B11-R CGCTCATTTTATCTACCTAACC versus GATA43H01-R ACGTGGTACAGGTAGATAAATGG

Matches = 13

Score = 8

CNNTTTATCTACCTNNNC

est. tm = 10.3 oC

DeltaG @37 degrees = -2.26 kcal/mole

3'-GGTAAATAGATGGACATGGTGCA-5'

|xx|||||||||||xxx|

5'-CGCTCATTTTATCTACCTAACC-3'

ATA11D10-R TGTCCAGGAATATCACCACA versus GATA151F03N-F CTGGACAGTCAGTTGGAGCT

Matches = 7

Score = 7

CTGGACA

est. tm = 9.7 oC

DeltaG @37 degrees = -4.84 kcal/mole

5'-CTGGACAGTCAGTTGGAGCT-3'

|||||||

3'-ACACCACTATAAGGACCTGT-5'

GATA23F08-R TATATTTCTTGGGAAAGATAGATGG versus GATA23F08-R TATATTTCTTGGGAAAGATAGATGG

Matches = 14

Score = 8

TATNTTTCNNNNGAAANATA

est. tm = less than 0 oC

DeltaG @37 degrees = > 0 kcal/mole

5'-TATATTTCTTGGGAAAGATAGATGG-3'

|||x||||xxxx||||x|||

3'-GGTAGATAGAAAGGGTTCTTTATAT-5'

GATA5E06-R TGTGCCCACACACATCTATC versus GATA23F08-R TATATTTCTTGGGAAAGATAGATGG

Matches = 8

Score = 7

NCATCTATC

est. tm = 8.0 oC

DeltaG @37 degrees = -3.81 kcal/mole

3'-GGTAGATAGAAAGGGTTCTTTATAT-5'

x||||||||

5'-TGTGCCCACACACATCTATC-3'

GGAA21G11-F TTTTAGGTGGCCACCATCTA versus GATA23F08-R TATATTTCTTGGGAAAGATAGATGG

Matches = 7

Score = 7

CCATCTA

est. tm = 0.3 oC

DeltaG @37 degrees = -3.39 kcal/mole

3'-GGTAGATAGAAAGGGTTCTTTATAT-5'

|||||||

5'-TTTTAGGTGGCCACCATCTA-3'

GATA188F04-F AACAGAACCAATAGGCTATCTATC versus GATA23F08-R TATATTTCTTGGGAAAGATAGATGG

Matches = 8

Score = 7

CNATCTATC

est. tm = less than zero

DeltaG @37 degrees = -1.39 kcal/mole

3'-GGTAGATAGAAAGGGTTCTTTATAT-5'

|x|||||||

5'-AACAGAACCAATAGGCTATCTATC-3'

GATA23F08-R TATATTTCTTGGGAAAGATAGATGG versus GATA129D11N-R TAGTACTCTACCATCCATCTATCCC

Matches = 9

Score = 7

NNGATAGATGG

est. tm = 15.0 oC

DeltaG @37 degrees = -4.68 kcal/mole

3'-CCCTATCTACCTACCATCTCATGAT-5'

xx|||||||||

5'-TATATTTCTTGGGAAAGATAGATGG-3'

GATA23F08-R TATATTTCTTGGGAAAGATAGATGG versus GATA129D11N-R TAGTACTCTACCATCCATCTATCCC

Matches = 13

Score = 11

GGGANAGATNGATGG

est. tm = 27.8 oC

DeltaG @37 degrees = -6.96 kcal/mole

3'-CCCTATCTACCTACCATCTCATGAT-5'

||||x||||x|||||

5'-TATATTTCTTGGGAAAGATAGATGG-3'

GATA21F03-R CCTGCCTGCCTATCTATCTG versus GATA23F08-R TATATTTCTTGGGAAAGATAGATGG

Matches = 9

Score = 7

CNATCTATCTN

est. tm = 4.2 oC

DeltaG @37 degrees = -3.08 kcal/mole

3'-GGTAGATAGAAAGGGTTCTTTATAT-5'

|x||||||||x

5'-CCTGCCTGCCTATCTATCTG-3'

UT1772-R GGGTGCTAGGTGTGCTCA versus GATA184A08-R GCACCTCTAACCCCCATATT

Matches = 11

Score = 7

GCACNNCTANCNCCC

est. tm = 4.9 oC

DeltaG @37 degrees = -2.92 kcal/mole

5'-GCACCTCTAACCCCCATATT-3'

||||xx|||x|x|||

3'-ACTCGTGTGGATCGTGGG-5'

ATA6C09-R AAAACTCAAGCTCAGAAAGGC versus GATA29F06Z-F TCTCTGCCCATTCTGAACTTT

Matches = 11

Score = 7

NAAGNTCAGAANGGN

est. tm = 17.3 oC

DeltaG @37 degrees = -5.10 kcal/mole

3'-TTTCAAGTCTTACCCGTCTCT-5'

x|||x||||||x||x

5'-AAAACTCAAGCTCAGAAAGGC-3'

ATA6C09-R AAAACTCAAGCTCAGAAAGGC versus GATA23B01N-R TTCCTAAGCATGAATTTTTACC

Matches = 14

Score = 10

TTNCTNAGCNTGANTTTT

est. tm = 9.9 oC

DeltaG @37 degrees = -2.92 kcal/mole

5'-TTCCTAAGCATGAATTTTTACC-3'

||x||x|||x|||x||||

3'-CGGAAAGACTCGAACTCAAAA-5'

AAAT007-R AGGCTCATCCACAGAGATGG versus ATA22G07-R TGCTCTGTCTATGGAGTAGCC

Matches = 13

Score = 7

GGCTNNTCCANAGANANNG

est. tm = 8.3 oC

DeltaG @37 degrees = -2.87 kcal/mole

3'-CCGATGAGGTATCTGTCTCGT-5'

||||xx||||x|||x|xx|

5'-AGGCTCATCCACAGAGATGG-3'

GATA119B03-R AACCTTCAGAATGCCATGAG versus GATA22G05-F TCCTGACATTCCTAGGGTGA

Matches = 13

Score = 7

TCNTGNCATTCNNANGGTN

est. tm = 4.8 oC

DeltaG @37 degrees = -2.34 kcal/mole

5'-TCCTGACATTCCTAGGGTGA-3'

||x||x|||||xx|x|||x

3'-GAGTACCGTAAGACTTCCAA-5'

GATA119B03-R AACCTTCAGAATGCCATGAG versus GATA29F06Z-F TCTCTGCCCATTCTGAACTTT

Matches = 14

Score = 8

AANNTTCAGAATGNNNNGAG

est. tm = 16.0 oC

DeltaG @37 degrees = -3.33 kcal/mole

3'-TTTCAAGTCTTACCCGTCTCT-5'

||xx|||||||||xxxx|||

5'-AACCTTCAGAATGCCATGAG-3'

GATA119B03-R AACCTTCAGAATGCCATGAG versus GGAA20G04-R TTCACAAGGTTCCACAAGGT

Matches = 9

Score = 7

TTCNNAAGGTT

est. tm = 2.3 oC

DeltaG @37 degrees = -2.97 kcal/mole

5'-TTCACAAGGTTCCACAAGGT-3'

|||xx||||||

3'-GAGTACCGTAAGACTTCCAA-5'

GATA84E11-F TGTTGGAAGACTTCTCAGCC versus GATA41G07-R AAAATCCTTTCAACAAATAGAAGC

Matches = 11

Score = 7

ANAANNCTTNCAACA

est. tm = less than 0 oC

DeltaG @37 degrees = -0.83 kcal/mole

5'-AAAATCCTTTCAACAAATAGAAGC-3'

|x||xx|||x|||||

3'-CCGACTCTTCAGAAGGTTGT-5'

GATA165G02N-F CAGGATTTTTCAGAAAGACA versus GATA41G07-R AAAATCCTTTCAACAAATAGAAGC

Matches = 8

Score = 7

AAAATCCTN

est. tm = 12.1 oC

DeltaG @37 degrees = -4.79 kcal/mole

5'-AAAATCCTTTCAACAAATAGAAGC-3'

||||||||x

3'-ACAGAAAGACTTTTTAGGAC-5'

GATA41G07-R AAAATCCTTTCAACAAATAGAAGC versus GATA165B12-R TTAAAATCATTTTCACTGTGTATGC

Matches = 10

Score = 7

TTNAAANNATTTT

est. tm = less than 0 oC

DeltaG @37 degrees = -0.05 kcal/mole

5'-TTAAAATCATTTTCACTGTGTATGC-3'

||x|||xx|||||

3'-CGAAGATAAACAACTTTCCTAAAA-5'

GATA13G11-R GGGTTCTGCAGAGAAACAGA versus GATA8A05-F TGGTTCTGCTTTTTCTCTCC

Matches = 10

Score = 7

GNAGAGAAANAGN

est. tm = 5.1 oC

DeltaG @37 degrees = -3.09 kcal/mole

3'-CCTCTCTTTTTCGTCTTGGT-5'

|x|||||||x||x

5'-GGGTTCTGCAGAGAAACAGA-3'

GATA13G11-R GGGTTCTGCAGAGAAACAGA versus GATA176C01-R CTCTATCTCTATCTCTGTCTCTGCC

Matches = 11

Score = 8

NGCAGAGANANAGA

est. tm = 18.3 oC

DeltaG @37 degrees = -5.33 kcal/mole

3'-CCGTCTCTGTCTCTATCTCTATCTC-5'

x|||||||x|x|||

5'-GGGTTCTGCAGAGAAACAGA-3'

GATA24D12-R ACCCAGGATTGTGCTAACCT versus GTTTT001-R AGCCTGGGTGACAGAGTGAA

Matches = 8

Score = 7

ANCCTGGGT

est. tm = 7.0 oC

DeltaG @37 degrees = -4.69 kcal/mole

5'-AGCCTGGGTGACAGAGTGAA-3'

|x|||||||

3'-TCCAATCGTGTTAGGACCCA-5'

GATG011-R CCACCACGGTATCATCCAAT versus GATA73D10N-R AGTAAATGGAATTGCTTGTTACC

Matches = 10

Score = 7

GGTANCANNCAAT

est. tm = less than zero

DeltaG @37 degrees = -1.83 kcal/mole

3'-CCATTGTTCGTTAAGGTAAATGA-5'

||||x||xx||||

5'-CCACCACGGTATCATCCAAT-3'

GATA5D08-R TATGACAGGCATCTGGGAGT versus GATA3F01-F TGTCATAGTTTAGAACGAACTAACG

Matches = 7

Score = 7

TGTCATA

est. tm = less than 0 oC

DeltaG @37 degrees = -3.13 kcal/mole

5'-TGTCATAGTTTAGAACGAACTAACG-3'

|||||||

3'-TGAGGGTCTACGGACAGTAT-5'

GATA5D08-R TATGACAGGCATCTGGGAGT versus GATA63D12-F ACTACTCCAAGGTTCCAGCC

Matches = 12

Score = 7

GNCNGGNANCTNGGAGT

est. tm = less than zero

DeltaG @37 degrees = -0.22 kcal/mole

3'-CCGACCTTGGAACCTCATCA-5'

|x|x||x|x||x|||||

5'-TATGACAGGCATCTGGGAGT-3'

GGAA6D03N-R CTCAGATGGAGATTCCCTCC versus GATA6B09-R ACATCTGAGACTTGTAGTAGAAGGC

Matches = 8

Score = 7

NCATCTGAG

est. tm = 14.9 oC

DeltaG @37 degrees = -5.09 kcal/mole

5'-ACATCTGAGACTTGTAGTAGAAGGC-3'

x||||||||

3'-CCTCCCTTAGAGGTAGACTC-5'

GATA63F08-R CTTGCAGATGGCCTAATTGT versus GATA7G07-R CGTAGCTATAATTAGTTCATTTTCA

Matches = 13

Score = 8

TGNANATGNNCTAATTNT

est. tm = less than zero

DeltaG @37 degrees = greater than zero

3'-ACTTTTACTTGATTAATATCGATGC-5'

||x|x|||xx||||||x|

5'-CTTGCAGATGGCCTAATTGT-3'

GATA63F08-R CTTGCAGATGGCCTAATTGT versus GGAA4B09N-F ACAGAATGAGACCATGTGTCA

Matches = 13

Score = 7

TNNCANATGGNCTNATTNT

est. tm = less than zero

DeltaG @37 degrees = greater than zero

3'-ACTGTGTACCAGAGTAAGACA-5'

|xx||x||||x||x|||x|

5'-CTTGCAGATGGCCTAATTGT-3'

GATA189C06-R GGAAGCCAAATGTTGAATTG versus GATA133A08N-R GAGGGGGCAATTAGACATCT

Matches = 10

Score = 7

ANATGTNNAATTG

est. tm = less than zero

DeltaG @37 degrees = -1.29 kcal/mole

3'-TCTACAGATTAACGGGGGAG-5'

|x||||xx|||||

5'-GGAAGCCAAATGTTGAATTG-3'

MFD442-GTTT002-R TTGGAGCATGACCAAAACCT versus GATA66B04-R GCAGAGAATCTGGACATGCT

Matches = 12

Score = 8

AGCATGNCCANANNCT

est. tm = 10.3 oC

DeltaG @37 degrees = -3.73 kcal/mole

3'-TCGTACAGGTCTAAGAGACG-5'

||||||x|||x|xx||

5'-TTGGAGCATGACCAAAACCT-3'

TTCA004-R CCCAGAGCCTAAATCTGTGC versus AAC040Z-R ACCCCCACCCAGATTTAGAC

Matches = 11

Score = 8

GNCTAAATCTGNGN

est. tm = 8.5 oC

DeltaG @37 degrees = -3.14 kcal/mole

3'-CAGATTTAGACCCACCCCCA-5'

|x|||||||||x|x

5'-CCCAGAGCCTAAATCTGTGC-3'

TTCA004-R CCCAGAGCCTAAATCTGTGC versus GATA21D04-F TAGGTTCTGGGCATGTCTGT

Matches = 10

Score = 9

TAGGNTCTGGG

est. tm = 20.4 oC

DeltaG @37 degrees = -5.93 kcal/mole

5'-TAGGTTCTGGGCATGTCTGT-3'

||||x||||||

3'-CGTGTCTAAATCCGAGACCC-5'

ATT070-F CCTCATTGTCGAGGCAGAAT versus ATAA018Z-R CCCATTATTCTAACCTGACAAGG

Matches = 12

Score = 7

CNTTGTCNNGNNAGAAT

est. tm = less than zero

DeltaG @37 degrees = -0.95 kcal/mole

3'-GGAACAGTCCAATCTTATTACCC-5'

|x|||||xx|xx|||||

5'-CCTCATTGTCGAGGCAGAAT-3'

UT7129-R CATTGCACTACAGGCTGAAT versus GATA137H02N-F ACTGAATAAGCTTGGAATGCA

Matches = 12

Score = 7

TGCANTNCANGCTNANT

est. tm = less than zero

DeltaG @37 degrees = -1.29 kcal/mole

3'-ACGTAAGGTTCGAATAAGTCA-5'

||||x|x||x|||x|x|

5'-CATTGCACTACAGGCTGAAT-3'

UT7129-R CATTGCACTACAGGCTGAAT versus GATA131D09-R AGACTGCAGTGAGATGCCAT

Matches = 12

Score = 8

AGNCTGNAGTGNNATG

est. tm = 5.2 oC

DeltaG @37 degrees = -2.47 kcal/mole

5'-AGACTGCAGTGAGATGCCAT-3'

||x|||x||||xx|||

3'-TAAGTCGGACATCACGTTAC-5'

GATA28D01-R TTTGAAGATCTGTGAAATGTGC versus GATA41A01-R TCAAAGAGATTAAAATGATGATGG

Matches = 11

Score = 7

TCANAGANNTTNAAA

est. tm = less than 0 oC

DeltaG @37 degrees = -0.54 kcal/mole

5'-TCAAAGAGATTAAAATGATGATGG-3'

|||x|||xx||x|||

3'-CGTGTAAAGTGTCTAGAAGTTT-5'

GGAT3F08-R TATCCATCCATCCATCAACC versus GATA8B01-R ATGGATAAATTGAGTTTCCCC

Matches = 7

Score = 7

ATGGATA

est. tm = less than 0 oC

DeltaG @37 degrees = -2.92 kcal/mole

5'-ATGGATAAATTGAGTTTCCCC-3'

|||||||

3'-CCAACTACCTACCTACCTAT-5'

GATA26E03-R CCCTCTCTCTTTCGAGCAAT versus ATA23G05-R TGCATTGCATGAAAGTAGGA

Matches = 12

Score = 7

TCNNNCTTTCNNGCAAT

est. tm = 8.8 oC

DeltaG @37 degrees = -2.69 kcal/mole

3'-AGGATGAAAGTACGTTACGT-5'

||xxx|||||xx|||||

5'-CCCTCTCTCTTTCGAGCAAT-3'

GATA26E03-R CCCTCTCTCTTTCGAGCAAT versus GATA49D12N-R AGATAGAGGGAAAGGCATATGTG

Matches = 9

Score = 8

AGANAGAGGG

est. tm = 13.1 oC

DeltaG @37 degrees = -4.94 kcal/mole

5'-AGATAGAGGGAAAGGCATATGTG-3'

|||x||||||

3'-TAACGAGCTTTCTCTCTCCC-5'

GATA26E03-R CCCTCTCTCTTTCGAGCAAT versus ATA37D06-R ATGTAAAGTGCTCTCAAGAGTGC

Matches = 12

Score = 7

NCNCTCTTNNGAGCANT

est. tm = 9.6 oC

DeltaG @37 degrees = -3.39 kcal/mole

3'-CGTGAGAACTCTCGTGAAATGTA-5'

x|x|||||xx|||||x|

5'-CCCTCTCTCTTTCGAGCAAT-3'

GATA7G07-R CGTAGCTATAATTAGTTCATTTTCA versus GATA11H10-R CAAAACAGAAACAGAACTAATAAGA

Matches = 14

Score = 9

TNTNATTAGTTCNNTTTCN

est. tm = 12.4 oC

DeltaG @37 degrees = -2.92 kcal/mole

3'-AGAATAATCAAGACAAAGACAAAAC-5'

|x|x||||||||xx||||x

5'-CGTAGCTATAATTAGTTCATTTTCA-3'

GATA50D10-R AGCTTGCCTGGTCTCTTACA versus GATA88H02N-R AAAAGTCAACAGTCTCAGAGACC

Matches = 9

Score = 7

GGTCTCTNANA

est. tm = less than zero

DeltaG @37 degrees = -2.59 kcal/mole

3'-CCAGAGACTCTGACAACTGAAAA-5'

|||||||x|x|

5'-AGCTTGCCTGGTCTCTTACA-3'

GATA50D10-R AGCTTGCCTGGTCTCTTACA versus GATA177C03N-R GCTGTAAGAGACCTGTGTTG

Matches = 13

Score = 8

CNNNNCNGGTCTCTTACA

est. tm = 16.3 oC

DeltaG @37 degrees = -3.94 kcal/mole

3'-GTTGTGTCCAGAGAATGTCG-5'

|xxxx|x|||||||||||

5'-AGCTTGCCTGGTCTCTTACA-3'

MFD455-AAT052-R GATGAGCCAGGAAGCCATAA versus GATA22F11NZ-F CCTGCCTCATCTCTTCAGGA

Matches = 10

Score = 9

CCTGNCTCATC

est. tm = 18.7 oC

DeltaG @37 degrees = -5.39 kcal/mole

5'-CCTGCCTCATCTCTTCAGGA-3'

||||x||||||

3'-AATACCGAAGGACCGAGTAG-5'

MFD455-AAT052-R GATGAGCCAGGAAGCCATAA versus GATA32B03-F AATAGTGACATTCTCTTCTTATGGC

Matches = 7

Score = 7

GCCATAA

est. tm = 4.9 oC

DeltaG @37 degrees = -4.04 kcal/mole

3'-CGGTATTCTTCTCTTACAGTGATAA-5'

|||||||

5'-GATGAGCCAGGAAGCCATAA-3'

MFD455-AAT052-R GATGAGCCAGGAAGCCATAA versus GATA68H04-R CCTGGATCATGAATTGCTAT

Matches = 9

Score = 7

CCTGGNTCATN

est. tm = 17.3 oC

DeltaG @37 degrees = -5.59 kcal/mole

5'-CCTGGATCATGAATTGCTAT-3'

|||||x||||x

3'-AATACCGAAGGACCGAGTAG-5'

MFD455-AAT052-R GATGAGCCAGGAAGCCATAA versus AAAT007-R AGGCTCATCCACAGAGATGG

Matches = 8

Score = 7

NGGCTCATC

est. tm = 21.7 oC

DeltaG @37 degrees = -6.41 kcal/mole

5'-AGGCTCATCCACAGAGATGG-3'

x||||||||

3'-AATACCGAAGGACCGAGTAG-5'

GATA62F03N-R AGCCAAAATGTTATGCAAG versus GATA74E02Z-F GGCGTGGTTTTCTTTCATAA

Matches = 8

Score = 7

TTATGNAAG

est. tm = less than zero

DeltaG @37 degrees = -1.31 kcal/mole

3'-AATACTTTCTTTTGGTGCGG-5'

|||||x|||

5'-AGCCAAAATGTTATGCAAG-3'

AAT243-F AATCGCTTGAACCCAGGAG versus AGAT142-R GACAGAACTTTTCCTTGGTTCA

Matches = 10

Score = 8

TGAACCNAGGAN

est. tm = 24.2 oC

DeltaG @37 degrees = -6.69 kcal/mole

3'-ACTTGGTTCCTTTTCAAGACAG-5'

||||||x||||x

5'-AATCGCTTGAACCCAGGAG-3'

GGAA8G07-F ATGCAAAGATGAACCAGGAA versus AGAT142-R GACAGAACTTTTCCTTGGTTCA

Matches = 9

Score = 7

TGAACCANGNA

est. tm = less than zero

DeltaG @37 degrees = -2.58 kcal/mole

3'-ACTTGGTTCCTTTTCAAGACAG-5'

|||||||x|x|

5'-ATGCAAAGATGAACCAGGAA-3'

AGAT142-R GACAGAACTTTTCCTTGGTTCA versus GGAA3A07Z-R CAACAAGAGCAAAAATCTGTCTC

Matches = 14

Score = 7

NAACNANNGNAAANNTCTGTC

est. tm = 6.3 oC

DeltaG @37 degrees = -1.65 kcal/mole

5'-CAACAAGAGCAAAAATCTGTCTC-3'

x|||x|xx|x|||xx||||||

3'-ACTTGGTTCCTTTTCAAGACAG-5'

AGAT142-R GACAGAACTTTTCCTTGGTTCA versus ATA37D06-R ATGTAAAGTGCTCTCAAGAGTGC

Matches = 11

Score = 7

ANGNAAAGTNCTNTC

est. tm = less than 0 oC

DeltaG @37 degrees = > 0 kcal/mole

5'-ATGTAAAGTGCTCTCAAGAGTGC-3'

|x|x|||||x||x||

3'-ACTTGGTTCCTTTTCAAGACAG-5'

GATA5E06-R TGTGCCCACACACATCTATC versus GATA8C04-F AGACCCTGTCTCAGATAGATGG

Matches = 8

Score = 7

NCATCTATC

est. tm = 8.0 oC

DeltaG @37 degrees = -3.81 kcal/mole

3'-GGTAGATAGACTCTGTCCCAGA-5'

x||||||||

5'-TGTGCCCACACACATCTATC-3'

GATA81C04-R TTAGCTGCTTCTGGGAAAGA versus GATA48E02-R CAGATTTCTGCTTTCCCAGA

Matches = 10

Score = 9

TCTGGGAAAGN

est. tm = 32.0 oC

DeltaG @37 degrees = -8.22 kcal/mole

3'-AGACCCTTTCGTCTTTAGAC-5'

||||||||||x

5'-TTAGCTGCTTCTGGGAAAGA-3'

GATA23C03N-F ATCAGGATTCCAGGAGGAAA versus GATA27-R AGTGTGAACATTATTTCATTCTGG

Matches = 9

Score = 7

CCAGNANGAAA

est. tm = less than zero

DeltaG @37 degrees = -2.03 kcal/mole

3'-GGTCTTACTTTATTACAAGTGTGA-5'

||||x|x||||

5'-ATCAGGATTCCAGGAGGAAA-3'

GATA31E08-F AGGGGAGAAGGCTAGAATGA versus GATA27-R AGTGTGAACATTATTTCATTCTGG

Matches = 8

Score = 7

CNAGAATGA

est. tm = less than zero

DeltaG @37 degrees = -2.33 kcal/mole

3'-GGTCTTACTTTATTACAAGTGTGA-5'

|x|||||||

5'-AGGGGAGAAGGCTAGAATGA-3'

GATA27-R AGTGTGAACATTATTTCATTCTGG versus GATA68F07-R GACAGGAGACAGAATGTTATAAGTT

Matches = 12

Score = 7

ANNTTATNNCATTCTGN

est. tm = 7.9 oC

DeltaG @37 degrees = -2.48 kcal/mole

3'-TTGAATATTGTAAGACAGAGGACAG-5'

|xx||||xx|||||||x

5'-AGTGTGAACATTATTTCATTCTGG-3'

GATA27-R AGTGTGAACATTATTTCATTCTGG versus GATA165B12-R TTAAAATCATTTTCACTGTGTATGC

Matches = 13

Score = 7

NTNAAATNATNTTCACNNT

est. tm = less than 0 oC

DeltaG @37 degrees = -0.24 kcal/mole

5'-TTAAAATCATTTTCACTGTGTATGC-3'

x|x||||x||x|||||xx|

3'-GGTCTTACTTTATTACAAGTGTGA-5'

GATA64G07-R AGACTTGGACTGAATTACACTGC versus GGAA30H04-R CAAGTCTCAAGAGGTAGAAGTGC

Matches = 7

Score = 7

CAAGTCT

est. tm = 3.9 oC

DeltaG @37 degrees = -3.85 kcal/mole

5'-CAAGTCTCAAGAGGTAGAAGTGC-3'

|||||||

3'-CGTCACATTAAGTCAGGTTCAGA-5'

GATA81B01-F ACACTGCAGGGTAAGACAGC versus GATA64G07-R AGACTTGGACTGAATTACACTGC

Matches = 11

Score = 7

GCAGNGTAANNCAGN

est. tm = 14.8 oC

DeltaG @37 degrees = -4.40 kcal/mole

3'-CGTCACATTAAGTCAGGTTCAGA-5'

||||x||||xx|||x

5'-ACACTGCAGGGTAAGACAGC-3'

GATA88F09-R TTGGGTTTCCTGACTTGTGT versus GATA73H09N-F CCAGTCTAGACACCCAGGAT

Matches = 12

Score = 7

CNAGTCNNGANACCCAN

est. tm = 15.4 oC

DeltaG @37 degrees = -4.59 kcal/mole

5'-CCAGTCTAGACACCCAGGAT-3'

|x||||xx||x|||||x

3'-TGTGTTCAGTCCTTTGGGTT-5'

ATA31G11N-R GCACAGTACTTCTCCCTCCA versus GGAA30H04-R CAAGTCTCAAGAGGTAGAAGTGC

Matches = 11

Score = 7

GNACTTCTNCCTCNN

est. tm = 14.2 oC

DeltaG @37 degrees = -4.40 kcal/mole

3'-CGTGAAGATGGAGAACTCTGAAC-5'

|x||||||x||||xx

5'-GCACAGTACTTCTCCCTCCA-3'

GATA70E11-R AGTTTGCAGTGAGCATGGTT versus GATA116B01N-R AATCAGCATGCCCACTGTAT

Matches = 12

Score = 7

NTNCAGTGNGCATGNTN

est. tm = 18.9 oC

DeltaG @37 degrees = -5.30 kcal/mole

3'-TATGTCACCCGTACGACTAA-5'

x|x|||||x|||||x|x

5'-AGTTTGCAGTGAGCATGGTT-3'

GATA70E11-R AGTTTGCAGTGAGCATGGTT versus GATA151F03N-R AAGGACTCACATGCACACTGC

Matches = 11

Score = 7

GCAGTGNGCATGNNN

est. tm = 29.6 oC

DeltaG @37 degrees = -7.53 kcal/mole

3'-CGTCACACGTACACTCAGGAA-5'

||||||x|||||xxx

5'-AGTTTGCAGTGAGCATGGTT-3'

GATA27A12-F GTGGCTTTGGAGGAACACTA versus ATA5A04N-R TTCAGTCTTGATCTAGTGCTCC

Matches = 8

Score = 7

GGANCACTA

est. tm = less than zero

DeltaG @37 degrees = -3.01 kcal/mole

3'-CCTCGTGATCTAGTTCTGACTT-5'

|||x|||||

5'-GTGGCTTTGGAGGAACACTA-3'

GATA49C09N-F GCAACAGAGCAAGACTGTC versus ATA5A04N-R TTCAGTCTTGATCTAGTGCTCC

Matches = 14

Score = 9

NNCAGTCTTGNTCTNNTGC

est. tm = 29.8 oC

DeltaG @37 degrees = -7.25 kcal/mole

5'-TTCAGTCTTGATCTAGTGCTCC-3'

xx||||||||x|||xx|||

3'-CTGTCAGAACGAGACAACG-5'

GATA70E01-R TAGAGCAAAACAGAAATGAGG versus ATA5A04N-R TTCAGTCTTGATCTAGTGCTCC

Matches = 12

Score = 9

TTCNGTNTTGNTCTA

est. tm = 2.1 oC

DeltaG @37 degrees = -1.97 kcal/mole

5'-TTCAGTCTTGATCTAGTGCTCC-3'

|||x||x|||x||||

3'-GGAGTAAAGACAAAACGAGAT-5'

ATA5A04N-R TTCAGTCTTGATCTAGTGCTCC versus GATA6B02-R GACTGAATATATGTCCTGTTGGC

Matches = 7

Score = 7

GACTGAA

est. tm = 4.3 oC

DeltaG @37 degrees = -3.88 kcal/mole

5'-GACTGAATATATGTCCTGTTGGC-3'

|||||||

3'-CCTCGTGATCTAGTTCTGACTT-5'

ATA24F10-R GTTACATAGGAAGCCCGGAT versus GGAA20C10-R TTCCTGTCCTCTAATGTAACTTACC

Matches = 14

Score = 8

NTCCNGNCNTCNNATGTAAC

est. tm = 8.4 oC

DeltaG @37 degrees = -2.31 kcal/mole

5'-TTCCTGTCCTCTAATGTAACTTACC-3'

x|||x|x|x||xx|||||||

3'-TAGGCCCGAAGGATACATTG-5'

ATA24F10-R GTTACATAGGAAGCCCGGAT versus GATA21F03-R CCTGCCTGCCTATCTATCTG

Matches = 13

Score = 8

CCNGNCTNCCTATNTANC

est. tm = less than 0 oC

DeltaG @37 degrees = > 0 kcal/mole

5'-CCTGCCTGCCTATCTATCTG-3'

||x|x||x|||||x||x|

3'-TAGGCCCGAAGGATACATTG-5'

GATA87G01-R TAGATTATCTAAATGGTGGATTTCC versus GATA87G01-R TAGATTATCTAAATGGTGGATTTCC

Matches = 10

Score = 9

TAGATNATCTA

est. tm = 3.4 oC

DeltaG @37 degrees = -2.58 kcal/mole

5'-TAGATTATCTAAATGGTGGATTTCC-3'

|||||x|||||

3'-CCTTTAGGTGGTAAATCTATTAGAT-5'

GATA11B12-R GGTGGAAATGCCTCATGTAG versus GATA87G01-R TAGATTATCTAAATGGTGGATTTCC

Matches = 13

Score = 9

GGAAATNCNNCATNTAG

est. tm = 6.5 oC

DeltaG @37 degrees = -1.94 kcal/mole

3'-CCTTTAGGTGGTAAATCTATTAGAT-5'

||||||x|xx|||x|||

5'-GGTGGAAATGCCTCATGTAG-3'

GATA115E01N-R CAGACAGATTCCTGTGGT versus GATA144D04-R ATCTTTCTGTACTTGCAGTGAGG

Matches = 8

Score = 7

ATCTNTCTG

est. tm = less than 0 oC

DeltaG @37 degrees = -2.61 kcal/mole

5'-ATCTTTCTGTACTTGCAGTGAGG-3'

||||x||||

3'-TGGTGTCCTTAGACAGAC-5'

GATA64A09-R CAGAGTGAGACCCTGTTTCA versus ATA29G03Z-R ATTTGGAATAAGGCCTGACT

Matches = 12

Score = 7

AGTNAGNCCNTNTTNCA

est. tm = less than zero

DeltaG @37 degrees = greater than zero

3'-TCAGTCCGGAATAAGGTTTA-5'

|||x||x||x|x||x||

5'-CAGAGTGAGACCCTGTTTCA-3'

GATA64A09-R CAGAGTGAGACCCTGTTTCA versus GATA30G01-R AATGAGGTCTTACTTTGTTGCC

Matches = 12

Score = 7

AANNNGGTCTNACTNTG

est. tm = 4.7 oC

DeltaG @37 degrees = -2.32 kcal/mole

5'-AATGAGGTCTTACTTTGTTGCC-3'

||xxx|||||x|||x||

3'-ACTTTGTCCCAGAGTGAGAC-5'

GGAA4A12-R CGAATGCATACTTGCTGTTG versus ATA29C03-R GCACAGAAACAGGAAGTATGC

Matches = 13

Score = 11

GCATACTTNCTGTTN

est. tm = 34.1 oC

DeltaG @37 degrees = -8.54 kcal/mole

3'-CGTATGAAGGACAAAGACACG-5'

||||||||x|||||x

5'-CGAATGCATACTTGCTGTTG-3'

GGAA23C05N-R ACCAATCTGGTCACAAACAT versus GATA4H09-F CAAAGAGGACATGTGTTTGTG

Matches = 8

Score = 7

CACAAACAN

est. tm = 19.1 oC

DeltaG @37 degrees = -5.81 kcal/mole

3'-GTGTTTGTGTACAGGAGAAAC-5'

||||||||x

5'-ACCAATCTGGTCACAAACAT-3'

GGAA23C05N-R ACCAATCTGGTCACAAACAT versus GATA4H01-R TCCCCAGTTTGGTTCAGATA

Matches = 10

Score = 7

TNNCCAGNTTGGT

est. tm = 4.7 oC

DeltaG @37 degrees = -3.41 kcal/mole

5'-TCCCCAGTTTGGTTCAGATA-3'

|xx||||x|||||

3'-TACAAACACTGGTCTAACCA-5'

GATA116B01N-F ATGGCCTATTGTGGGATCTT versus GATA23F06-R GAGTAAACAAGATTGCTAGATAGGC

Matches = 12

Score = 7

GCCTATNNNGNNATCTT

est. tm = 8.1 oC

DeltaG @37 degrees = -2.52 kcal/mole

3'-CGGATAGATCGTTAGAACAAATGAG-5'

||||||xxx|xx|||||

5'-ATGGCCTATTGTGGGATCTT-3'

GATA68A03-F TGATTACTCTGAGGAAGAAGGC versus GATA23F06-R GAGTAAACAAGATTGCTAGATAGGC

Matches = 8

Score = 7

GAGTAANCA

est. tm = less than 0 oC

DeltaG @37 degrees = -2.19 kcal/mole

5'-GAGTAAACAAGATTGCTAGATAGGC-3'

||||||x||

3'-CGGAAGAAGGAGTCTCATTAGT-5'

GATA44F10-F TTCCAGCCTAGGTAGCAGTG versus GATA23F06-R GAGTAAACAAGATTGCTAGATAGGC

Matches = 11

Score = 7

GCCTANNTAGCANTN

est. tm = 17.9 oC

DeltaG @37 degrees = -5.12 kcal/mole

3'-CGGATAGATCGTTAGAACAAATGAG-5'

|||||xx|||||x|x

5'-TTCCAGCCTAGGTAGCAGTG-3'

GATA188F04-F AACAGAACCAATAGGCTATCTATC versus GATA23F06-R GAGTAAACAAGATTGCTAGATAGGC

Matches = 9

Score = 7

GNCTATCTANC

est. tm = less than zero

DeltaG @37 degrees = -0.12 kcal/mole

3'-CGGATAGATCGTTAGAACAAATGAG-5'

|x|||||||x|

5'-AACAGAACCAATAGGCTATCTATC-3'

AGAT120-R TTGTCTGTCATCTATCTACCCATC versus GATA23F06-R GAGTAAACAAGATTGCTAGATAGGC

Matches = 11

Score = 7

NNCTATCTANCNATC

est. tm = less than zero

DeltaG @37 degrees = -1.35 kcal/mole

3'-CGGATAGATCGTTAGAACAAATGAG-5'

xx|||||||x|x|||

5'-TTGTCTGTCATCTATCTACCCATC-3'

GATA21F03-R CCTGCCTGCCTATCTATCTG versus GATA23F06-R GAGTAAACAAGATTGCTAGATAGGC

Matches = 10

Score = 7

GCCTATCTANCNN

est. tm = 14.9 oC

DeltaG @37 degrees = -4.58 kcal/mole

3'-CGGATAGATCGTTAGAACAAATGAG-5'

|||||||||x|xx

5'-CCTGCCTGCCTATCTATCTG-3'

GATA21F03-R CCTGCCTGCCTATCTATCTG versus GATA23F06-R GAGTAAACAAGATTGCTAGATAGGC

Matches = 12

Score = 7

GCCTNNCTANCNATCTN

est. tm = 9.6 oC

DeltaG @37 degrees = -3.35 kcal/mole

3'-CGGATAGATCGTTAGAACAAATGAG-5'

||||xx|||x|x||||x

5'-CCTGCCTGCCTATCTATCTG-3'

ATA34E08N-R CTACCTCATAGCCAGGAGG versus ATA34E08N-R CTACCTCATAGCCAGGAGG

Matches = 12

Score = 8

CCTCNTNGCNANGAGG

est. tm = 5.6 oC

DeltaG @37 degrees = -3.05 kcal/mole

3'-GGAGGACCGATACTCCATC-5'

||||x|x||x|x||||

5'-CTACCTCATAGCCAGGAGG-3'

ATA34E08N-R CTACCTCATAGCCAGGAGG versus TATC043-F GCCATCCTCCTGCAAATAAG

Matches = 11

Score = 7

CTNATNNNCAGGAGG

est. tm = 9.6 oC

DeltaG @37 degrees = -3.41 kcal/mole

3'-GAATAAACGTCCTCCTACCG-5'

||x||xxx|||||||

5'-CTACCTCATAGCCAGGAGG-3'

ATA1B07-R AGATTATGCATGTGTAAAGAGCC versus GATA27C08N-R ACACTACACAAGCATAGTCAGGC

Matches = 14

Score = 8

NCNNTACACANGCATANTCN

est. tm = 21.8 oC

DeltaG @37 degrees = -5.26 kcal/mole

5'-ACACTACACAAGCATAGTCAGGC-3'

x|xx||||||x|||||x||x

3'-CCGAGAAATGTGTACGTATTAGA-5'

ATA1B07-R AGATTATGCATGTGTAAAGAGCC versus GATA64H04-R TCTTCATACATGCTTTATCATGC

Matches = 15

Score = 10

TCTTNANACATGCNTNATCN

est. tm = 20.6 oC

DeltaG @37 degrees = -5.03 kcal/mole

5'-TCTTCATACATGCTTTATCATGC-3'

||||x|x||||||x|x|||x

3'-CCGAGAAATGTGTACGTATTAGA-5'

ATA9B04N-R AGCCATGAAAACATCTGGA versus ATTT019-R TTCATGGCCACAGAATTCAC

Matches = 8

Score = 7

TTCATGGCN

est. tm = 22.4 oC

DeltaG @37 degrees = -6.62 kcal/mole

5'-TTCATGGCCACAGAATTCAC-3'

||||||||x

3'-AGGTCTACAAAAGTACCGA-5'

ATA9B04N-R AGCCATGAAAACATCTGGA versus GATA63F09-F TTCACATGCATATGTCTTTATGG

Matches = 13

Score = 9

CCATNAANACATNTGNA

est. tm = 3.3 oC

DeltaG @37 degrees = -2.04 kcal/mole

3'-GGTATTTCTGTATACGTACACTT-5'

||||x||x||||x||x|

5'-AGCCATGAAAACATCTGGA-3'

ATA9B04N-R AGCCATGAAAACATCTGGA versus GATA6C01-R TGGCACTAGATGTTTTCAAGG

Matches = 14

Score = 11

CCNTGAAAACATCTNGN

est. tm = 30.5 oC

DeltaG @37 degrees = -7.48 kcal/mole

3'-GGAACTTTTGTAGATCACGGT-5'

||x|||||||||||x|x

5'-AGCCATGAAAACATCTGGA-3'

GATA12F04-R TATAGGCACATGCCACTGTG versus GATA43H03N-R ATTTGAACAGAGGCATGTAC

Matches = 12

Score = 9

GNACATGCCNCTGTN

est. tm = 29.4 oC

DeltaG @37 degrees = -7.52 kcal/mole

3'-CATGTACGGAGACAAGTTTA-5'

|x|||||||x||||x

5'-TATAGGCACATGCCACTGTG-3'

ATA3A07-R TGGCAGGCGCTTTTAATC versus GATA12F04-R TATAGGCACATGCCACTGTG

Matches = 11

Score = 7

TANANGCNCNTGCCA

est. tm = less than 0 oC

DeltaG @37 degrees = -1.93 kcal/mole

5'-TATAGGCACATGCCACTGTG-3'

||x|x||x|x|||||

3'-CTAATTTTCGCGGACGGT-5'

GATA12F04-R TATAGGCACATGCCACTGTG versus GATA29A01-F CTGTGCCTCTATTGCCTCAT

Matches = 9

Score = 7

NTGTGCCTNTA

est. tm = 16.1 oC

DeltaG @37 degrees = -5.39 kcal/mole

5'-CTGTGCCTCTATTGCCTCAT-3'

x|||||||x||

3'-GTGTCACCGTACACGGATAT-5'

GATA12F04-R TATAGGCACATGCCACTGTG versus GATA22G12-R GGGTGACAGAGTGAGATGTG

Matches = 11

Score = 8

CACATNNCACTNTG

est. tm = 12.4 oC

DeltaG @37 degrees = -3.83 kcal/mole

3'-GTGTAGAGTGAGACAGTGGG-5'

|||||xx||||x||

5'-TATAGGCACATGCCACTGTG-3'

GATA90D07N-R CCCGGCCTTGATTTATTTAA versus GGAA4B09N-R CACACTCAAAATACATGAAGGC

Matches = 12

Score = 8

GCCTTNATNTATTTNN

est. tm = 15.0 oC

DeltaG @37 degrees = -4.06 kcal/mole

3'-CGGAAGTACATAAAACTCACAC-5'

|||||x||x|||||xx

5'-CCCGGCCTTGATTTATTTAA-3'

GATA90D07N-R CCCGGCCTTGATTTATTTAA versus GATA172D05-R ATAATTGAAAGCCCGGATTC

Matches = 12

Score = 8

ATAANTNAANGCCNGG

est. tm = less than 0 oC

DeltaG @37 degrees = -1.29 kcal/mole

5'-ATAATTGAAAGCCCGGATTC-3'

||||x|x||x|||x||

3'-AATTTATTTAGTTCCGGCCC-5'

GATA72H07-F AAAGCACAGTCCACACTCCT versus GATA28D01-R TTTGAAGATCTGTGAAATGTGC

Matches = 12

Score = 7

GCACANTNCACANNNCT

est. tm = 10.9 oC

DeltaG @37 degrees = -3.48 kcal/mole

3'-CGTGTAAAGTGTCTAGAAGTTT-5'

|||||x|x||||xxx||

5'-AAAGCACAGTCCACACTCCT-3'

GATA64D03-F ACATTTCCAAGGGCTACACA versus GATA28D01-R TTTGAAGATCTGTGAAATGTGC

Matches = 14

Score = 8

TNTGNAGNNCTNNGAAATGT

est. tm = 2.0 oC

DeltaG @37 degrees = -1.08 kcal/mole

5'-TTTGAAGATCTGTGAAATGTGC-3'

|x||x||xx||xx|||||||

3'-ACACATCGGGAACCTTTACA-5'

GATA87E02N-R TTGATTGACTGCACTTTTCA versus GATA28D01-R TTTGAAGATCTGTGAAATGTGC

Matches = 9

Score = 8

GCACNTTTCA

est. tm = 13.5 oC

DeltaG @37 degrees = -4.74 kcal/mole

3'-CGTGTAAAGTGTCTAGAAGTTT-5'

||||x|||||

5'-TTGATTGACTGCACTTTTCA-3'

GATA23E06-R GGGAGGCACCAACAGATG versus GATA4H09-F CAAAGAGGACATGTGTTTGTG

Matches = 10

Score = 8

CACNAACANATG

est. tm = 5.8 oC

DeltaG @37 degrees = -3.06 kcal/mole

3'-GTGTTTGTGTACAGGAGAAAC-5'

|||x||||x|||

5'-GGGAGGCACCAACAGATG-3'

GATA23E06-R GGGAGGCACCAACAGATG versus PAH-F GCCAGAACAACTGCTGGTTC

Matches = 10

Score = 7

GNACCANCAGNTG

est. tm = less than zero

DeltaG @37 degrees = -2.15 kcal/mole

3'-CTTGGTCGTCAACAAGACCG-5'

|x||||x|||x||

5'-GGGAGGCACCAACAGATG-3'

GATA23E06-R GGGAGGCACCAACAGATG versus GATA11C06N-R AGCGTTTGTGTGTGCATCTGT

Matches = 7

Score = 7

ACAGATG

est. tm = 4.1 oC

DeltaG @37 degrees = -3.88 kcal/mole

3'-TGTCTACGTGTGTGTTTGCGA-5'

|||||||

5'-GGGAGGCACCAACAGATG-3'

GATA117D01N-R GATTGATCTGTCTGTCCGTC versus GATA118G10-F ACATACGGATGAATGGATGG

Matches = 11

Score = 7

ACANACNGATNAATN

est. tm = less than 0 oC

DeltaG @37 degrees = -1.99 kcal/mole

5'-ACATACGGATGAATGGATGG-3'

|||x||x|||x|||x

3'-CTGCCTGTCTGTCTAGTTAG-5'

GATA117D01N-R GATTGATCTGTCTGTCCGTC versus GATA7G10-R GCCCAAAAAGACAGACAGAA

Matches = 9

Score = 7

NTCTGTCNGTC

est. tm = 13.6 oC

DeltaG @37 degrees = -4.73 kcal/mole

3'-AAGACAGACAGAAAAACCCG-5'

x||||||x|||

5'-GATTGATCTGTCTGTCCGTC-3'

GATA117D01N-R GATTGATCTGTCTGTCCGTC versus GATA7G10-R GCCCAAAAAGACAGACAGAA

Matches = 11

Score = 7

NTCTGTCTGTCNNTN

est. tm = 26.9 oC

DeltaG @37 degrees = -6.92 kcal/mole

3'-AAGACAGACAGAAAAACCCG-5'

x||||||||||xx|x

5'-GATTGATCTGTCTGTCCGTC-3'

GATA4H03-R TCCAATGGAAAGAAATGGAG versus GATA4H03-R TCCAATGGAAAGAAATGGAG

Matches = 8

Score = 7

TCCANTGGA

est. tm = 4.7 oC

DeltaG @37 degrees = -4.22 kcal/mole

5'-TCCAATGGAAAGAAATGGAG-3'

||||x||||

3'-GAGGTAAAGAAAGGTAACCT-5'

GATA4H03-R TCCAATGGAAAGAAATGGAG versus GATA129B03N-R GGATCTTTTCAGCCTCCATT

Matches = 7

Score = 7

AATGGAG

est. tm = 3.0 oC

DeltaG @37 degrees = -3.81 kcal/mole

3'-TTACCTCCGACTTTTCTAGG-5'

|||||||

5'-TCCAATGGAAAGAAATGGAG-3'

GATA4H03-R TCCAATGGAAAGAAATGGAG versus GATA71C09-F GAGTTGCGTTACTTGATTTCTT

Matches = 9

Score = 7

AAGAAATNNAG

est. tm = less than zero

DeltaG @37 degrees = -1.91 kcal/mole

3'-TTCTTTAGTTCATTGCGTTGAG-5'

|||||||xx||

5'-TCCAATGGAAAGAAATGGAG-3'

GATA4H03-R TCCAATGGAAAGAAATGGAG versus GATA21C12-R CCCATTGGAAACAGAGTTGA

Matches = 8

Score = 7

NCCATTGGA

est. tm = 17.7 oC

DeltaG @37 degrees = -5.82 kcal/mole

5'-CCCATTGGAAACAGAGTTGA-3'

x||||||||

3'-GAGGTAAAGAAAGGTAACCT-5'

GATA4H03-R TCCAATGGAAAGAAATGGAG versus GATA29F06Z-R ACACCTGCCTTTCTTTCCTG

Matches = 12

Score = 8

NNGGAAAGAAANGNAG

est. tm = 15.0 oC

DeltaG @37 degrees = -4.02 kcal/mole

3'-GTCCTTTCTTTCCGTCCACA-5'

xx|||||||||x|x||

5'-TCCAATGGAAAGAAATGGAG-3'

ATA27A06N-R AACCTGCATGTTCTGCATAT versus ATA27A06N-R AACCTGCATGTTCTGCATAT

Matches = 10

Score = 8

AACNTGCANGTT

est. tm = 8.3 oC

DeltaG @37 degrees = -3.85 kcal/mole

5'-AACCTGCATGTTCTGCATAT-3'

|||x||||x|||

3'-TATACGTCTTGTACGTCCAA-5'

ATA27A06N-R AACCTGCATGTTCTGCATAT versus ATA55A11N-R CAGAAAATGGAGGGTAGCAA

Matches = 12

Score = 9

CAGAANATGNAGGNT

est. tm = 7.8 oC

DeltaG @37 degrees = -3.11 kcal/mole

5'-CAGAAAATGGAGGGTAGCAA-3'

|||||x|||x|||x|

3'-TATACGTCTTGTACGTCCAA-5'

GATA26D02N-R AGTGTGATATGAATAATGAGCTGC versus GATA7D12-F AGTTTTCATAACACAAAAGAGAACA

Matches = 12

Score = 7

ANTNTTCATANCACANN

est. tm = 4.2 oC

DeltaG @37 degrees = -2.22 kcal/mole

5'-AGTTTTCATAACACAAAAGAGAACA-3'

|x|x||||||x||||xx

3'-CGTCGAGTAATAAGTATAGTGTGA-5'

ATA25F09N-R TGGCTGACAGAGCCTAAAGT versus GATA6D09-F CTGTCCTCTAGGCTCATTTAGC

Matches = 13

Score = 8

GCTNANNGAGCCTANAGN

est. tm = 22.1 oC

DeltaG @37 degrees = -5.72 kcal/mole

3'-CGATTTACTCGGATCTCCTGTC-5'

|||x|xx|||||||x||x

5'-TGGCTGACAGAGCCTAAAGT-3'

ATA25F09N-R TGGCTGACAGAGCCTAAAGT versus ATA20G07Z-R TGTGAGCCAGACATTAAACA

Matches = 8

Score = 7

TGTNAGCCA

est. tm = 8.6 oC

DeltaG @37 degrees = -4.73 kcal/mole

5'-TGTGAGCCAGACATTAAACA-3'

|||x|||||

3'-TGAAATCCGAGACAGTCGGT-5'

GATA32F05-R AAGGTCAGAATCCCTCATCC versus ATA19H08-R GCATTGTGGGATGAGGTATG

Matches = 10

Score = 8

NATNCCTCATCC

est. tm = 19.4 oC

DeltaG @37 degrees = -5.63 kcal/mole

3'-GTATGGAGTAGGGTGTTACG-5'

x||x||||||||

5'-AAGGTCAGAATCCCTCATCC-3'

AAAAT002-R GGCCAAACTCCCTCCATTA versus GGAT3H10-F GGATGGATGGACATAATGGA

Matches = 7

Score = 7

TCCATTA

est. tm = less than zero

DeltaG @37 degrees = -3.06 kcal/mole

3'-AGGTAATACAGGTAGGTAGG-5'

|||||||

5'-GGCCAAACTCCCTCCATTA-3'

AAAAT002-R GGCCAAACTCCCTCCATTA versus GGAA7G08NZ-R CTGGGCAATGGAGTGAGACT

Matches = 11

Score = 7

ANNCTCNCTCCATTN

est. tm = 11.3 oC

DeltaG @37 degrees = -3.93 kcal/mole

3'-TCAGAGTGAGGTAACGGGTC-5'

|xx|||x|||||||x

5'-GGCCAAACTCCCTCCATTA-3'

ATA5A09N-R CACCCCACGTCTAGCTATAG versus GATA134B03-R GCTGCTTCCCTAAACCTAGA

Matches = 9

Score = 7

TCTAGNTNTAG

est. tm = less than zero

DeltaG @37 degrees = -0.47 kcal/mole

3'-AGATCCAAATCCCTTCGTCG-5'

|||||x|x|||

5'-CACCCCACGTCTAGCTATAG-3'

GATA86H01-R CACTACAGCAGATTGCACCA versus AAT013-F GCTGTGGTGAGCTGTGATTG

Matches = 8

Score = 7

GCTGTNGTG

est. tm = 9.7 oC

DeltaG @37 degrees = -4.47 kcal/mole

5'-GCTGTGGTGAGCTGTGATTG-3'

|||||x|||

3'-ACCACGTTAGACGACATCAC-5'

GATA86H01-R CACTACAGCAGATTGCACCA versus ATA25F04-R AGACCCAGTTGATGCAATGT

Matches = 9

Score = 7

ANATTGCANCA

est. tm = less than zero

DeltaG @37 degrees = -2.55 kcal/mole

3'-TGTAACGTAGTTGACCCAGA-5'

|x||||||x||

5'-CACTACAGCAGATTGCACCA-3'

GATA43H03N-R ATTTGAACAGAGGCATGTAC versus GATA131D09-F AAAAATCTGACTCTATTCAAATGTT

Matches = 14

Score = 8

NNANNTGNCTCTNTTCAAAT

est. tm = 12.7 oC

DeltaG @37 degrees = -2.98 kcal/mole

5'-AAAAATCTGACTCTATTCAAATGTT-3'

xx|xx||x||||x|||||||

3'-CATGTACGGAGACAAGTTTA-5'

GATA30D09N-R AGCCTCTGTGCAGATCCTC versus GATA43H03N-R ATTTGAACAGAGGCATGTAC

Matches = 12

Score = 9

ATNTGNACAGAGGCN

est. tm = 27.6 oC

DeltaG @37 degrees = -7.14 kcal/mole

5'-ATTTGAACAGAGGCATGTAC-3'

||x||x||||||||x

3'-CTCCTAGACGTGTCTCCGA-5'

GATA51B02-R TCATCTCCCTGTTTGGTAGC versus GATA197B10-R GAGATGATAAATGACAGCTACAGG

Matches = 7

Score = 7

GAGATGA

est. tm = 2.2 oC

DeltaG @37 degrees = -3.60 kcal/mole

5'-GAGATGATAAATGACAGCTACAGG-3'

|||||||

3'-CGATGGTTTGTCCCTCTACT-5'

AGAT113Z-R CGCTACCACGGGTGTTTTTA versus GATA2F11-F TATTTCCAACACCCCTGCTA

Matches = 12

Score = 7

TANCANGGGTGTTNNNA

est. tm = 3.2 oC

DeltaG @37 degrees = -2.25 kcal/mole

3'-ATCGTCCCCACAACCTTTAT-5'

||x||x|||||||xxx|

5'-CGCTACCACGGGTGTTTTTA-3'

AGAT113Z-R CGCTACCACGGGTGTTTTTA versus ATA25F04-F TCATTAATCTAGCTTTTAAAAACAA

Matches = 8

Score = 7

NTGTTTTTA

est. tm = 6.6 oC

DeltaG @37 degrees = -3.60 kcal/mole

3'-AACAAAAATTTTCGATCTAATTACT-5'

x||||||||

5'-CGCTACCACGGGTGTTTTTA-3'

ATA77F05-R AGGAGGATGCAGGTGAAAGG versus GATA63F09-F TTCACATGCATATGTCTTTATGG

Matches = 12

Score = 7

TTCACNTGCATNNNNCT

est. tm = 13.3 oC

DeltaG @37 degrees = -3.71 kcal/mole

5'-TTCACATGCATATGTCTTTATGG-3'

|||||x|||||xxxx||

3'-GGAAAGTGGACGTAGGAGGA-5'

ATA77F05-R AGGAGGATGCAGGTGAAAGG versus TATC043-F GCCATCCTCCTGCAAATAAG

Matches = 9

Score = 7

NNCATCCTCCT

est. tm = 21.9 oC

DeltaG @37 degrees = -6.27 kcal/mole

5'-GCCATCCTCCTGCAAATAAG-3'

xx|||||||||

3'-GGAAAGTGGACGTAGGAGGA-5'

ATA77F05-R AGGAGGATGCAGGTGAAAGG versus ATA21A03-R TGCATCCACCTTTGCTATAA

Matches = 10

Score = 9

TGCATCCNCCT

est. tm = 24.1 oC

DeltaG @37 degrees = -6.73 kcal/mole

5'-TGCATCCACCTTTGCTATAA-3'

|||||||x|||

3'-GGAAAGTGGACGTAGGAGGA-5'

ATA29G03Z-R ATTTGGAATAAGGCCTGACT versus GATA31-F TGTACAAAAGCCTATTTAGTCAGG

Matches = 7

Score = 7

CCTGACT

est. tm = 8.4 oC

DeltaG @37 degrees = -4.66 kcal/mole

3'-GGACTGATTTATCCGAAAACATGT-5'

|||||||

5'-ATTTGGAATAAGGCCTGACT-3'

ATA29G03Z-R ATTTGGAATAAGGCCTGACT versus GATA27C08N-R ACACTACACAAGCATAGTCAGGC

Matches = 8

Score = 8

GCCTGACT

est. tm = 22.5 oC

DeltaG @37 degrees = -6.61 kcal/mole

3'-CGGACTGATACGAACACATCACA-5'

||||||||

5'-ATTTGGAATAAGGCCTGACT-3'

ATA29G03Z-R ATTTGGAATAAGGCCTGACT versus AGAT125-R TGGCAAAGTCAGGCCATTAT

Matches = 11

Score = 8

ANNANGGCCTGACT

est. tm = 18.4 oC

DeltaG @37 degrees = -5.49 kcal/mole

3'-TATTACCGGACTGAAACGGT-5'

|xx|x|||||||||

5'-ATTTGGAATAAGGCCTGACT-3'

GATA129D11N-F GCACCCCTTTATACTTGGGTG versus GGAA30H04-R CAAGTCTCAAGAGGTAGAAGTGC

Matches = 12

Score = 7

CAAGTNTNAAGNGGTNN

est. tm = 10.3 oC

DeltaG @37 degrees = -3.44 kcal/mole

5'-CAAGTCTCAAGAGGTAGAAGTGC-3'

|||||x|x|||x|||xx

3'-GTGGGTTCATATTTCCCCACG-5'

GGAA4A12-R CGAATGCATACTTGCTGTTG versus AAT193-R GCAAGGATGCAGAAGGAAAG

Matches = 11

Score = 7

GCAAGNATGCANNNG

est. tm = 14.8 oC

DeltaG @37 degrees = -4.26 kcal/mole

5'-GCAAGGATGCAGAAGGAAAG-3'

|||||x|||||xxx|

3'-GTTGTCGTTCATACGTAAGC-5'

GATA193A07-R AGCCTGTGGCATCTTGTTAG versus ATA7D07-F ATCCCACAGGATGCCTATTT

Matches = 10

Score = 8

ATNCCACAGGNT

est. tm = 7.2 oC

DeltaG @37 degrees = -3.95 kcal/mole

5'-ATCCCACAGGATGCCTATTT-3'

||x|||||||x|

3'-GATTGTTCTACGGTGTCCGA-5'

GATA193A07-R AGCCTGTGGCATCTTGTTAG versus GATA11H10-R CAAAACAGAAACAGAACTAATAAGA

Matches = 8

Score = 7

TCTTNTTAG

est. tm = less than zero

DeltaG @37 degrees = -1.58 kcal/mole

3'-AGAATAATCAAGACAAAGACAAAAC-5'

||||x||||

5'-AGCCTGTGGCATCTTGTTAG-3'

GATA193A07-R AGCCTGTGGCATCTTGTTAG versus GGAA20G04-R TTCACAAGGTTCCACAAGGT

Matches = 14

Score = 8

NTNACAAGNTNCCACANGNT

est. tm = 5.2 oC

DeltaG @37 degrees = -2.36 kcal/mole

5'-TTCACAAGGTTCCACAAGGT-3'

x|x|||||x|x|||||x|x|

3'-GATTGTTCTACGGTGTCCGA-5'

GATA193A07-R AGCCTGTGGCATCTTGTTAG versus GGAA20G04-R TTCACAAGGTTCCACAAGGT

Matches = 14

Score = 8

ANCNTGTGGNANCTTGTNAN

est. tm = 7.0 oC

DeltaG @37 degrees = -2.76 kcal/mole

3'-TGGAACACCTTGGAACACTT-5'

|x|x|||||x|x|||||x|x

5'-AGCCTGTGGCATCTTGTTAG-3'

GATA168F06-R ATCAGTGAGCCAATTCCTTG versus GATA164A09-R CTCAGTTCAAGGAAATGGGA

Matches = 10

Score = 7

NNCCANTTCCTTG

est. tm = 18.7 oC

DeltaG @37 degrees = -5.38 kcal/mole

3'-AGGGTAAAGGAACTTGACTC-5'

xx|||x|||||||

5'-ATCAGTGAGCCAATTCCTTG-3'

GATA168F06-R ATCAGTGAGCCAATTCCTTG versus GATA22G12-F AAAGCTAGAAGGAGCTGGCT

Matches = 10

Score = 7

AGCCANNTCCTTN

est. tm = 24.7 oC

DeltaG @37 degrees = -6.77 kcal/mole

3'-TCGGTCGAGGAAGATCGAAA-5'

|||||xx|||||x

5'-ATCAGTGAGCCAATTCCTTG-3'

GATA168F06-R ATCAGTGAGCCAATTCCTTG versus GAAT1A4N-F ATTCGTTCACTCATTTGTCC

Matches = 11

Score = 8

ATTNGNTCACTNAT

est. tm = less than 0 oC

DeltaG @37 degrees = -1.08 kcal/mole

5'-ATTCGTTCACTCATTTGTCC-3'

|||x|x|||||x||

3'-GTTCCTTAACCGAGTGACTA-5'

GATA88H02N-R AAAAGTCAACAGTCTCAGAGACC versus GATA88H02N-R AAAAGTCAACAGTCTCAGAGACC

Matches = 10

Score = 7

NGTCTCNGAGACN

est. tm = 22.8 oC

DeltaG @37 degrees = -6.28 kcal/mole

3'-CCAGAGACTCTGACAACTGAAAA-5'

x|||||x|||||x

5'-AAAAGTCAACAGTCTCAGAGACC-3'

ATA10H11-F GGTGACAGAGACTCTTGTCTCA versus GATA88H02N-R AAAAGTCAACAGTCTCAGAGACC

Matches = 15

Score = 8

GGTNNCNGAGACTNTTGNCTNN

est. tm = 17.6 oC

DeltaG @37 degrees = -4.14 kcal/mole

3'-CCAGAGACTCTGACAACTGAAAA-5'

|||xx|x||||||x|||x||xx

5'-GGTGACAGAGACTCTTGTCTCA-3'

GATA88H02N-R AAAAGTCAACAGTCTCAGAGACC versus GATA63D12-R AATATTGACTTTCTCTTGCTACCC

Matches = 10

Score = 7

ANTNTTGACTTTN

est. tm = 4.3 oC

DeltaG @37 degrees = -3.07 kcal/mole

5'-AATATTGACTTTCTCTTGCTACCC-3'

|x|x||||||||x

3'-CCAGAGACTCTGACAACTGAAAA-5'

GGAA29H03N-R AGTTGACTCTTTCCCCAACTA versus GATA88H02N-R AAAAGTCAACAGTCTCAGAGACC

Matches = 9

Score = 7

AANAGTCAACN

est. tm = 11.4 oC

DeltaG @37 degrees = -4.47 kcal/mole

5'-AAAAGTCAACAGTCTCAGAGACC-3'

||x|||||||x

3'-ATCAACCCCTTTCTCAGTTGA-5'

GATA74E02Z-R TGAGCCTTTAGACTTGGACCA versus GATA88H02N-R AAAAGTCAACAGTCTCAGAGACC

Matches = 12

Score = 7

NNAAGTCNANAGNCTCA

est. tm = 5.7 oC

DeltaG @37 degrees = -2.61 kcal/mole

5'-AAAAGTCAACAGTCTCAGAGACC-3'

xx|||||x|x||x||||

3'-ACCAGGTTCAGATTTCCGAGT-5'

GATA2F11-R AAGCAAAGAGGATTGAAAGTG versus GATA50G06-R AACAGCTTTAAAACCTCAATGC

Matches = 13

Score = 7

GCANNGAGGNTTNAAAGNN

est. tm = 15.9 oC

DeltaG @37 degrees = -4.14 kcal/mole

3'-CGTAACTCCAAAATTTCGACAA-5'

|||xx||||x||x||||xx

5'-AAGCAAAGAGGATTGAAAGTG-3'

GATA50G06-R AACAGCTTTAAAACCTCAATGC versus GATA144D04-R ATCTTTCTGTACTTGCAGTGAGG

Matches = 8

Score = 7

CCTCANTGC

est. tm = 10.7 oC

DeltaG @37 degrees = -4.71 kcal/mole

3'-GGAGTGACGTTCATGTCTTTCTA-5'

|||||x|||

5'-AACAGCTTTAAAACCTCAATGC-3'

ATA24A08-R CATCACTCAAGGCTCAAGGT versus GATA129D11N-F GCACCCCTTTATACTTGGGTG

Matches = 12

Score = 7

CACNCAAGNNTNAAGGN

est. tm = 10.4 oC

DeltaG @37 degrees = -3.45 kcal/mole

3'-GTGGGTTCATATTTCCCCACG-5'

|||x||||xx|x||||x

5'-CATCACTCAAGGCTCAAGGT-3'

ATA24A08-R CATCACTCAAGGCTCAAGGT versus GATA74E02Z-R TGAGCCTTTAGACTTGGACCA

Matches = 12

Score = 8

TGAGCCTTNAGNNNTG

est. tm = 19.1 oC

DeltaG @37 degrees = -5.07 kcal/mole

5'-TGAGCCTTTAGACTTGGACCA-3'

||||||||x||xxx||

3'-TGGAACTCGGAACTCACTAC-5'

ATA24A08-R CATCACTCAAGGCTCAAGGT versus ATA19H08-R GCATTGTGGGATGAGGTATG

Matches = 10

Score = 7

GCNTTGNGNGATG

est. tm = less than 0 oC

DeltaG @37 degrees = -1.56 kcal/mole

5'-GCATTGTGGGATGAGGTATG-3'

||x|||x|x||||

3'-TGGAACTCGGAACTCACTAC-5'

GATA197B10-R GAGATGATAAATGACAGCTACAGG versus GATA165B12-F TATGTATCATCAATCATCTATCCG

Matches = 14

Score = 8

TANNTNTCATNNATCATCTN

est. tm = 11.4 oC

DeltaG @37 degrees = -2.71 kcal/mole

5'-TATGTATCATCAATCATCTATCCG-3'

||xx|x||||xx|||||||x

3'-GGACATCGACAGTAAATAGTAGAG-5'

GATA11C08-R GGCTGCAGTTAGCTGTCATT versus GATA197B10-R GAGATGATAAATGACAGCTACAGG

Matches = 12

Score = 9

CNNNTAGCTGTCATT

est. tm = 22.5 oC

DeltaG @37 degrees = -5.56 kcal/mole

3'-GGACATCGACAGTAAATAGTAGAG-5'

|xxx|||||||||||

5'-GGCTGCAGTTAGCTGTCATT-3'

AAT095-R TGCTCACGGTTGTCCTGTAG versus GATA197B10-R GAGATGATAAATGACAGCTACAGG

Matches = 7

Score = 7

CCTGTAG

est. tm = 5.5 oC

DeltaG @37 degrees = -4.00 kcal/mole

3'-GGACATCGACAGTAAATAGTAGAG-5'

|||||||

5'-TGCTCACGGTTGTCCTGTAG-3'

GATA197B10-R GAGATGATAAATGACAGCTACAGG versus AGAT120-R TTGTCTGTCATCTATCTACCCATC

Matches = 14

Score = 7

NTNNCTGTCATNTATCNNCNC

est. tm = 3.0 oC

DeltaG @37 degrees = -0.95 kcal/mole

5'-TTGTCTGTCATCTATCTACCCATC-3'

x|xx|||||||x||||xx|x|

3'-GGACATCGACAGTAAATAGTAGAG-5'

TTTA028-R GGCACCTTTAATCCCAGCTA versus GATA11C08-R GGCTGCAGTTAGCTGTCATT

Matches = 9

Score = 7

AATNNCAGCTA

est. tm = 1.5 oC

DeltaG @37 degrees = -2.80 kcal/mole

3'-TTACTGTCGATTGACGTCGG-5'

|||xx||||||

5'-GGCACCTTTAATCCCAGCTA-3'

TTTA028-R GGCACCTTTAATCCCAGCTA versus AAT034-R CTGGGATTACAGGCGTGAGT

Matches = 13

Score = 9

CTGGGATTANAGGNGNN

est. tm = 25.4 oC

DeltaG @37 degrees = -6.36 kcal/mole

5'-CTGGGATTACAGGCGTGAGT-3'

|||||||||x|||x|xx

3'-ATCGACCCTAATTTCCACGG-5'

ATA3A07-R TGGCAGGCGCTTTTAATC versus GATA2F11-R AAGCAAAGAGGATTGAAAGTG

Matches = 9

Score = 7

CNCTTTNAATC

est. tm = less than zero

DeltaG @37 degrees = -0.69 kcal/mole

3'-GTGAAAGTTAGGAGAAACGAA-5'

|x||||x||||

5'-TGGCAGGCGCTTTTAATC-3'

ATT001-R AAGTTGCAGTGAGCCGAGAT versus GATA70E01-F CCCACTACAACTTCAGGTAGA

Matches = 11

Score = 9

CNCACTNCAACTT

est. tm = 12.2 oC

DeltaG @37 degrees = -3.97 kcal/mole

5'-CCCACTACAACTTCAGGTAGA-3'

|x||||x||||||

3'-TAGAGCCGAGTGACGTTGAA-5'

ATT001-R AAGTTGCAGTGAGCCGAGAT versus GATA22F11NZ-R TCTCTCTTGCTCCACTGCAA

Matches = 12

Score = 7

TTGCAGTGNNNCNAGAN

est. tm = 21.3 oC

DeltaG @37 degrees = -5.56 kcal/mole

3'-AACGTCACCTCGTTCTCTCT-5'

||||||||xxx|x|||x

5'-AAGTTGCAGTGAGCCGAGAT-3'

GGAA3G05-R ATTGAAAACAACTCCGTCCA versus GATA74E02Z-F GGCGTGGTTTTCTTTCATAA

Matches = 11

Score = 7

GGNGTNGTTTTCNNT

est. tm = less than 0 oC

DeltaG @37 degrees = -1.27 kcal/mole

5'-GGCGTGGTTTTCTTTCATAA-3'

||x||x||||||xx|

3'-ACCTGCCTCAACAAAAGTTA-5'

GGAA3G05-R ATTGAAAACAACTCCGTCCA versus AAT013-R ATTTGCTTTCAACCCCACTG

Matches = 10

Score = 7

ANTTGNTTTCAAN

est. tm = 3.2 oC

DeltaG @37 degrees = -2.81 kcal/mole

5'-ATTTGCTTTCAACCCCACTG-3'

|x|||x||||||x

3'-ACCTGCCTCAACAAAAGTTA-5'

GGAA3G05-R ATTGAAAACAACTCCGTCCA versus GATA6C01-R TGGCACTAGATGTTTTCAAGG

Matches = 14

Score = 8

TGGNNNNAGNTGTTTTCAAN

est. tm = 24.1 oC

DeltaG @37 degrees = -5.66 kcal/mole

5'-TGGCACTAGATGTTTTCAAGG-3'

|||xxxx||x|||||||||x

3'-ACCTGCCTCAACAAAAGTTA-5'

ATTT019-R TTCATGGCCACAGAATTCAC versus GATA22F09N-R TTGTGTGGGAATGCAGTGATGC

Matches = 11

Score = 7

TTNTGTGGNNATGNA

est. tm = less than 0 oC

DeltaG @37 degrees = -1.67 kcal/mole

5'-TTGTGTGGGAATGCAGTGATGC-3'

||x|||||xx|||x|

3'-CACTTAAGACACCGGTACTT-5'

ATA20G07Z-F TTCCCTCACTATCTGCCTAA versus GATA22F09N-R TTGTGTGGGAATGCAGTGATGC

Matches = 9

Score = 7

TNGTGNGGGAA

est. tm = less than 0 oC

DeltaG @37 degrees = -2.95 kcal/mole

5'-TTGTGTGGGAATGCAGTGATGC-3'

|x|||x|||||

3'-AATCCGTCTATCACTCCCTT-5'

GATA121A08N-R TGAGTATGCCACACTGCA versus GATA22F09N-R TTGTGTGGGAATGCAGTGATGC

Matches = 9

Score = 7

GCNNCACTGCA

est. tm = 18.5 oC

DeltaG @37 degrees = -5.69 kcal/mole

3'-CGTAGTGACGTAAGGGTGTGTT-5'

||xx|||||||

5'-TGAGTATGCCACACTGCA-3'

GATA48E02-R CAGATTTCTGCTTTCCCAGA versus GATA22F09N-R TTGTGTGGGAATGCAGTGATGC

Matches = 13

Score = 7

NNATNNCTGCNTTCCCANA

est. tm = 16.7 oC

DeltaG @37 degrees = -4.52 kcal/mole

3'-CGTAGTGACGTAAGGGTGTGTT-5'

xx||xx||||x||||||x|

5'-CAGATTTCTGCTTTCCCAGA-3'

GATA81D12-R TAATGTACCTGGTACCAAAAACA versus GATA81D12-R TAATGTACCTGGTACCAAAAACA

Matches = 14

Score = 8

TGTNNNTGGTACCANNNACA

est. tm = 24.4 oC

DeltaG @37 degrees = -5.81 kcal/mole

3'-ACAAAAACCATGGTCCATGTAAT-5'

|||xxx||||||||xxx|||

5'-TAATGTACCTGGTACCAAAAACA-3'

ATACC001-R TTGAACTGAAGAGGCAAGCA versus GATA164A09-R CTCAGTTCAAGGAAATGGGA

Matches = 9

Score = 8

NTCAGTTCAA

est. tm = 21.5 oC

DeltaG @37 degrees = -6.08 kcal/mole

5'-CTCAGTTCAAGGAAATGGGA-3'

x|||||||||

3'-ACGAACGGAGAAGTCAAGTT-5'

ATACC001-R TTGAACTGAAGAGGCAAGCA versus GATA22F11NZ-F CCTGCCTCATCTCTTCAGGA

Matches = 13

Score = 8

CNTGCCTCNTCNNTTCAN

est. tm = 21.8 oC

DeltaG @37 degrees = -5.59 kcal/mole

5'-CCTGCCTCATCTCTTCAGGA-3'

|x||||||x||xx||||x

3'-ACGAACGGAGAAGTCAAGTT-5'

GATA71F09-R TACCGCGTAGTGAGACTGTG versus GATA31A10-F TCTAAACTCCTTTGCACAGTC

Matches = 7

Score = 7

GACTGTG

est. tm = 9.4 oC

DeltaG @37 degrees = -4.52 kcal/mole

3'-CTGACACGTTTCCTCAAATCT-5'

|||||||

5'-TACCGCGTAGTGAGACTGTG-3'

GATA158H04-R CCAGTCTTCCGTCACTATGC versus GATA7G10-F ACAGAAGTCTGGGATGTGGA

Matches = 10

Score = 8

ACNGAAGNCTGG

est. tm = 6.2 oC

DeltaG @37 degrees = -3.47 kcal/mole

5'-ACAGAAGTCTGGGATGTGGA-3'

||x||||x||||

3'-CGTATCACTGCCTTCTGACC-5'

ATA78D02N-R GGCAAGAGAACTCACGTAA versus GATA128C02N-F AGACCCCAAAATTACTTGAG

Matches = 8

Score = 7

CTCANGTAA

est. tm = less than zero

DeltaG @37 degrees = -2.19 kcal/mole

3'-GAGTTCATTAAAACCCCAGA-5'

||||x||||

5'-GGCAAGAGAACTCACGTAA-3'

ATA78D02N-R GGCAAGAGAACTCACGTAA versus GATA71C09-F GAGTTGCGTTACTTGATTTCTT

Matches = 11

Score = 8

NAGAANTCANGTAA

est. tm = 8.7 oC

DeltaG @37 degrees = -3.28 kcal/mole

3'-TTCTTTAGTTCATTGCGTTGAG-5'

x||||x|||x||||

5'-GGCAAGAGAACTCACGTAA-3'

GGAA9D03-R TTCTTTCCTTACTAAGTTGAGAACG versus GGAA9D03-R TTCTTTCCTTACTAAGTTGAGAACG

Matches = 16

Score = 9

TTCTNNNCTTANTAAGNNNAGAA

est. tm = 11.6 oC

DeltaG @37 degrees = -1.70 kcal/mole

5'-TTCTTTCCTTACTAAGTTGAGAACG-3'

||||xxx||||x||||xxx||||

3'-GCAAGAGTTGAATCATTCCTTTCTT-5'

GATA29F06Z-F TCTCTGCCCATTCTGAACTTT versus GGAA9D03-R TTCTTTCCTTACTAAGTTGAGAACG

Matches = 10

Score = 7

CNTTCTNAACTTN

est. tm = 4.6 oC

DeltaG @37 degrees = -2.96 kcal/mole

3'-GCAAGAGTTGAATCATTCCTTTCTT-5'

|x||||x|||||x

5'-TCTCTGCCCATTCTGAACTTT-3'

GATA11B12-R GGTGGAAATGCCTCATGTAG versus AAT245-R CCTTTACCACTTGTGGCACTT

Matches = 11

Score = 7

AANTGCCNCANGTNG

est. tm = less than zero

DeltaG @37 degrees = -1.63 kcal/mole

3'-TTCACGGTGTTCACCATTTCC-5'

||x||||x||x||x|

5'-GGTGGAAATGCCTCATGTAG-3'

AAT245-R CCTTTACCACTTGTGGCACTT versus GATA43H01-R ACGTGGTACAGGTAGATAAATGG

Matches = 10

Score = 8

ANGTGGTANAGG

est. tm = 7.2 oC

DeltaG @37 degrees = -3.73 kcal/mole

5'-ACGTGGTACAGGTAGATAAATGG-3'

|x||||||x|||

3'-TTCACGGTGTTCACCATTTCC-5'

ATA43A10Z-R AGTAAGGGCCTGAAAAAGAC versus ATGG002-R CCTACCTTCTCCAGGCCTTT

Matches = 12

Score = 7

AANGGCCTGNANAAGNN

est. tm = 14.5 oC

DeltaG @37 degrees = -4.54 kcal/mole

3'-TTTCCGGACCTCTTCCATCC-5'

||x||||||x|x|||xx

5'-AGTAAGGGCCTGAAAAAGAC-3'

GATA178F11Z-R TCACAAGAAAGGGATGGTGA versus TTAT023z-F TGTTGGGCTTCACCATACCT

Matches = 10

Score = 9

AGGNATGGTGA

est. tm = 20.2 oC

DeltaG @37 degrees = -5.95 kcal/mole

3'-TCCATACCACTTCGGGTTGT-5'

|||x|||||||

5'-TCACAAGAAAGGGATGGTGA-3'

GATA178F11Z-R TCACAAGAAAGGGATGGTGA versus ATGG002-R CCTACCTTCTCCAGGCCTTT

Matches = 10

Score = 7

AAAGGNNTGGNGA

est. tm = 1.5 oC

DeltaG @37 degrees = -2.83 kcal/mole

3'-TTTCCGGACCTCTTCCATCC-5'

|||||xx|||x||

5'-TCACAAGAAAGGGATGGTGA-3'

AGAT060-R TACCATGCCAAGGACATCAA versus AAT095-F TTGGGATGGTGAAAAGGTTC

Matches = 9

Score = 7

TTGGNATGGTN

est. tm = 15.7 oC

DeltaG @37 degrees = -5.39 kcal/mole

5'-TTGGGATGGTGAAAAGGTTC-3'

||||x|||||x

3'-AACTACAGGAACCGTACCAT-5'

GATA11A06-R TCCAGCAACAACAAGAGACA versus GATA29A05-F TTTTGTTTCTTGATCTGGGC

Matches = 10

Score = 7

TNTTGTTNCTNGA

est. tm = less than 0 oC

DeltaG @37 degrees = -0.63 kcal/mole

5'-TTTTGTTTCTTGATCTGGGC-3'

|x|||||x||x||

3'-ACAGAGAACAACAACGACCT-5'

GATA11A06-R TCCAGCAACAACAAGAGACA versus GATA87E02N-F GTTGTTGCTGGGCTTAGAAA

Matches = 11

Score = 10

GTTGTTGCTGGN

est. tm = 40.6 oC

DeltaG @37 degrees = -10.32 kcal/mole

5'-GTTGTTGCTGGGCTTAGAAA-3'

|||||||||||x

3'-ACAGAGAACAACAACGACCT-5'

GATA63F09-F TTCACATGCATATGTCTTTATGG versus GATA13-R AGACAGAAATATAGATGAGAATGCA

Matches = 15

Score = 9

ANANAGANATATNNATGNGAA

est. tm = less than 0 oC

DeltaG @37 degrees = > 0 kcal/mole

5'-AGACAGAAATATAGATGAGAATGCA-3'

|x|x|||x||||xx|||x|||

3'-GGTATTTCTGTATACGTACACTT-5'

GATA13-R AGACAGAAATATAGATGAGAATGCA versus GATA176C01-R CTCTATCTCTATCTCTGTCTCTGCC

Matches = 11

Score = 8

CTNTATNTCTNTCT

est. tm = less than 0 oC

DeltaG @37 degrees = -0.82 kcal/mole

5'-CTCTATCTCTATCTCTGTCTCTGCC-3'

||x|||x|||x|||

3'-ACGTAAGAGTAGATATAAAGACAGA-5'

GATA13-R AGACAGAAATATAGATGAGAATGCA versus GATA176C01-R CTCTATCTCTATCTCTGTCTCTGCC

Matches = 14

Score = 8

NNNNATCTNTATNTCTGTCT

est. tm = 17.9 oC

DeltaG @37 degrees = -4.00 kcal/mole

5'-CTCTATCTCTATCTCTGTCTCTGCC-3'

xxxx||||x|||x|||||||

3'-ACGTAAGAGTAGATATAAAGACAGA-5'

ATA23G05-R TGCATTGCATGAAAGTAGGA versus ATA23G05-R TGCATTGCATGAAAGTAGGA

Matches = 8

Score = 7

TGCANTGCA

est. tm = 13.1 oC

DeltaG @37 degrees = -5.31 kcal/mole

5'-TGCATTGCATGAAAGTAGGA-3'

||||x||||

3'-AGGATGAAAGTACGTTACGT-5'

ATA23G05-R TGCATTGCATGAAAGTAGGA versus CTAT014-R CAGCTTTCAAACAGTGCAGGT

Matches = 13

Score = 8

CNNCTTTCANNCANTGCA

est. tm = 13.9 oC

DeltaG @37 degrees = -3.64 kcal/mole

5'-CAGCTTTCAAACAGTGCAGGT-3'

|xx||||||xx||x||||

3'-AGGATGAAAGTACGTTACGT-5'

ATA23G05-R TGCATTGCATGAAAGTAGGA versus GATA30G01-R AATGAGGTCTTACTTTGTTGCC

Matches = 11

Score = 7

NGCANNAAAGTANGA

est. tm = 10.2 oC

DeltaG @37 degrees = -3.52 kcal/mole

3'-CCGTTGTTTCATTCTGGAGTAA-5'

x|||xx||||||x||

5'-TGCATTGCATGAAAGTAGGA-3'

GATA21D04-R TGCTTGGCACACTTCAGG versus GATA21G05-R GTGTCCCTAGCACCTAGCAA

Matches = 10

Score = 8

GTGTNCCNAGCA

est. tm = 14.6 oC

DeltaG @37 degrees = -5.00 kcal/mole

5'-GTGTCCCTAGCACCTAGCAA-3'

||||x||x||||

3'-GGACTTCACACGGTTCGT-5'

GATA66B04-R GCAGAGAATCTGGACATGCT versus ATA19H08-F TTCCAGAGTATTTGCTTAAGAGG

Matches = 11

Score = 7

NTCCAGANTNTNTGC

est. tm = 10.9 oC

DeltaG @37 degrees = -4.11 kcal/mole

5'-TTCCAGAGTATTTGCTTAAGAGG-3'

x||||||x|x|x|||

3'-TCGTACAGGTCTAAGAGACG-5'

GATA66B04-R GCAGAGAATCTGGACATGCT versus GATA29F06Z-F TCTCTGCCCATTCTGAACTTT

Matches = 7

Score = 7

TCTCTGC

est. tm = 10.7 oC

DeltaG @37 degrees = -4.93 kcal/mole

5'-TCTCTGCCCATTCTGAACTTT-3'

|||||||

3'-TCGTACAGGTCTAAGAGACG-5'

Mfd232-R GAAACACATCATTTACCCAC versus GATA6B02-F TAGATAGATGATGTTGTTGTTGATG

Matches = 13

Score = 7

TNGNTANATGATGTNNTTN

est. tm = less than 0 oC

DeltaG @37 degrees = -0.67 kcal/mole

5'-TAGATAGATGATGTTGTTGTTGATG-3'

|x|x||x|||||||xx||x

3'-CACCCATTTACTACACAAAG-5'

Mfd232-R GAAACACATCATTTACCCAC versus ATA18A07-R TATATGAAGTGCTTAGAAAAAGTGC

Matches = 11

Score = 7

TANATGANGTGNTTN

est. tm = less than 0 oC

DeltaG @37 degrees = -1.72 kcal/mole

5'-TATATGAAGTGCTTAGAAAAAGTGC-3'

||x||||x|||x||x

3'-CACCCATTTACTACACAAAG-5'

Mfd232-R GAAACACATCATTTACCCAC versus GATA30G01-R AATGAGGTCTTACTTTGTTGCC

Matches = 10

Score = 7

AATGANGTNTTNC

est. tm = less than 0 oC

DeltaG @37 degrees = -0.27 kcal/mole

5'-AATGAGGTCTTACTTTGTTGCC-3'

|||||x||x||x|

3'-CACCCATTTACTACACAAAG-5'

ATA27F01-R CCCCACCCCTTTTAGTTTTA versus Mfd238-R GACTCCGTATTAAAAAAAAAAG

Matches = 10

Score = 8

CTTTTNNTTTTA

est. tm = 1.8 oC

DeltaG @37 degrees = -1.80 kcal/mole

3'-GAAAAAAAAAATTATGCCTCAG-5'

|||||xx|||||

5'-CCCCACCCCTTTTAGTTTTA-3'

Mfd238-R GACTCCGTATTAAAAAAAAAAG versus ATGT006Z-F AAGGCTGAGGTAGGCTTATTTTT

Matches = 8

Score = 7

AAAAANAAG

est. tm = less than zero

DeltaG @37 degrees = -1.43 kcal/mole

3'-TTTTTATTCGGATGGAGTCGGAA-5'

|||||x|||

5'-GACTCCGTATTAAAAAAAAAAG-3'

Mfd238-R GACTCCGTATTAAAAAAAAAAG versus SDF1-F GGCCTGAATTCATTTATTATTATTCTAATA

Matches = 11

Score = 7

TATTANAANAANAAN

est. tm = less than zero

DeltaG @37 degrees = greater than zero

3'-ATAATCTTATTATTATTTACTTAAGTCCGG-5'

|||||x||x||x||x

5'-GACTCCGTATTAAAAAAAAAAG-3'

GATA21D04-F TAGGTTCTGGGCATGTCTGT versus GATA51D03-R GAACCTAAAACTCTAAGGAAGCG

Matches = 7

Score = 7

GAACCTA

est. tm = 1.4 oC

DeltaG @37 degrees = -3.52 kcal/mole

5'-GAACCTAAAACTCTAAGGAAGCG-3'

|||||||

3'-TGTCTGTACGGGTCTTGGAT-5'

GATA129B03N-R GGATCTTTTCAGCCTCCATT versus UT7136-R GTGGTCTGAGAAGATACTTGA

Matches = 12

Score = 7

GNNGNCTGANAAGATNC

est. tm = less than 0 oC

DeltaG @37 degrees = > 0 kcal/mole

5'-GTGGTCTGAGAAGATACTTGA-3'

|xx|x||||x|||||x|

3'-TTACCTCCGACTTTTCTAGG-5'

GATA129B03N-R GGATCTTTTCAGCCTCCATT versus ATA55A11N-R CAGAAAATGGAGGGTAGCAA

Matches = 11

Score = 7

TTNNNANCCTCCATT

est. tm = 4.9 oC

DeltaG @37 degrees = -2.74 kcal/mole

3'-AACGATGGGAGGTAAAAGAC-5'

||xxx|x||||||||

5'-GGATCTTTTCAGCCTCCATT-3'

ATA27F01-R CCCCACCCCTTTTAGTTTTA versus GATA42A03-R TGTTATAGCAGCAATAGAAAACTAA

Matches = 8

Score = 7

TTAGTTTTN

est. tm = 7.5 oC

DeltaG @37 degrees = -3.83 kcal/mole

3'-AATCAAAAGATAACGACGATATTGT-5'

||||||||x

5'-CCCCACCCCTTTTAGTTTTA-3'

GATA28F03-F TTCAGGAGTTTAGCTTTCTATGC versus GATA42A03-R TGTTATAGCAGCAATAGAAAACTAA

Matches = 11

Score = 8

TTAGNTTTCTATNN

est. tm = 10.6 oC

DeltaG @37 degrees = -3.23 kcal/mole

3'-AATCAAAAGATAACGACGATATTGT-5'

||||x|||||||xx

5'-TTCAGGAGTTTAGCTTTCTATGC-3'

UT6540-F TTCCTCTGGCTTCTAGAAG versus GATA42A03-R TGTTATAGCAGCAATAGAAAACTAA

Matches = 13

Score = 7

NTTNTAGNAGCNANAGNAA

est. tm = less than zero

DeltaG @37 degrees = greater than zero

5'-TGTTATAGCAGCAATAGAAAACTAA-3'

x||x|||x|||x|x||x||

3'-GAAGATCTTCGGTCTCCTT-5'

GGAA3C07-R TTCTCTACATATTTACTGCCAACA versus GATA52B03-R AAGTAAACATGTATAGGAAAAAGCT

Matches = 14

Score = 10

NAGTAAANATGTANAGNA

est. tm = 13.7 oC

DeltaG @37 degrees = -3.34 kcal/mole

5'-AAGTAAACATGTATAGGAAAAAGCT-3'

x||||||x|||||x||x|

3'-ACAACCGTCATTTATACATCTCTT-5'

GATA21F03-F TATGTACAGACCTGCAACTTGC versus GGAA3C07-R TTCTCTACATATTTACTGCCAACA

Matches = 9

Score = 7

NTCTNTACATA

est. tm = 1.2 oC

DeltaG @37 degrees = -2.65 kcal/mole

5'-TTCTCTACATATTTACTGCCAACA-3'

x|||x||||||

3'-CGTTCAACGTCCAGACATGTAT-5'

GATA6B02-R GACTGAATATATGTCCTGTTGGC versus GGAA3C07-R TTCTCTACATATTTACTGCCAACA

Matches = 7

Score = 7

TGTTGGC

est. tm = 14.1 oC

DeltaG @37 degrees = -5.48 kcal/mole

3'-ACAACCGTCATTTATACATCTCTT-5'

|||||||

5'-GACTGAATATATGTCCTGTTGGC-3'

ATA27F01-R CCCCACCCCTTTTAGTTTTA versus GATA22G12-F AAAGCTAGAAGGAGCTGGCT

Matches = 13

Score = 7

AAANCTANAAGGNGNNGGN

est. tm = 0.0 oC

DeltaG @37 degrees = -1.49 kcal/mole

5'-AAAGCTAGAAGGAGCTGGCT-3'

|||x|||x||||x|xx||x

3'-ATTTTGATTTTCCCCACCCC-5'

ATA27F01-R CCCCACCCCTTTTAGTTTTA versus GATA3F01-R CTGAGGTATCAAAAACTCAGAGG

Matches = 10

Score = 7

CCTNTNAGTTTTN

est. tm = 6.9 oC

DeltaG @37 degrees = -3.47 kcal/mole

3'-GGAGACTCAAAAACTATGGAGTC-5'

|||x|x||||||x

5'-CCCCACCCCTTTTAGTTTTA-3'

UT1355Z-R CCCACTCCCAGCCTTCTAA versus GATA7G10-F ACAGAAGTCTGGGATGTGGA

Matches = 13

Score = 7

NNAGAAGNCTGGGANNNGG

est. tm = 23.1 oC

DeltaG @37 degrees = -5.73 kcal/mole

5'-ACAGAAGTCTGGGATGTGGA-3'

xx|||||x||||||xxx||

3'-AATCTTCCGACCCTCACCC-5'

UT1355Z-R CCCACTCCCAGCCTTCTAA versus GTTTT001-F GGGAGGGAGTAGGAGGTGTT

Matches = 10

Score = 7

GGNNGGGAGTNGG

est. tm = 12.1 oC

DeltaG @37 degrees = -4.57 kcal/mole

5'-GGGAGGGAGTAGGAGGTGTT-3'

||xx||||||x||

3'-AATCTTCCGACCCTCACCC-5'

UT1355Z-R CCCACTCCCAGCCTTCTAA versus GATA6B09-R ACATCTGAGACTTGTAGTAGAAGGC

Matches = 8

Score = 7

GCCTTCTAN

est. tm = 19.9 oC

DeltaG @37 degrees = -6.06 kcal/mole

3'-CGGAAGATGATGTTCAGAGTCTACA-5'

||||||||x

5'-CCCACTCCCAGCCTTCTAA-3'

GATA198B05N-R GAGAGACAGAACCTATAGCATGC versus GATA68F07-R GACAGGAGACAGAATGTTATAAGTT

Matches = 11

Score = 8

AACNTATANCATNC

est. tm = less than zero

DeltaG @37 degrees = greater than zero

3'-TTGAATATTGTAAGACAGAGGACAG-5'

|||x||||x|||x|

5'-GAGAGACAGAACCTATAGCATGC-3'

GATA52B03-R AAGTAAACATGTATAGGAAAAAGCT versus GATA50F11-F ATACATTTATATTTGCATCTGTGTG

Matches = 11

Score = 8

ATACATNTNTANTT

est. tm = less than 0 oC

DeltaG @37 degrees = > 0 kcal/mole

5'-ATACATTTATATTTGCATCTGTGTG-3'

||||||x|x||x||

3'-TCGAAAAAGGATATGTACAAATGAA-5'

GATA23B01N-R TTCCTAAGCATGAATTTTTACC versus GATA52B03-R AAGTAAACATGTATAGGAAAAAGCT

Matches = 13

Score = 7

AANNANNCATGNNTAGGAA

est. tm = 1.4 oC

DeltaG @37 degrees = -1.04 kcal/mole

5'-AAGTAAACATGTATAGGAAAAAGCT-3'

||xx|xx||||xx||||||

3'-CCATTTTTAAGTACGAATCCTT-5'

GATA175D03-R CAGGAGTATGGGATCACCAG versus GATA11C06N-F GATCCCAAGCTCTTCCTCTT

Matches = 11

Score = 7

GATCCCANNCTCNTN

est. tm = 16.1 oC

DeltaG @37 degrees = -4.83 kcal/mole

5'-GATCCCAAGCTCTTCCTCTT-3'

|||||||xx|||x|x

3'-GACCACTAGGGTATGAGGAC-5'

GATA175D03-R CAGGAGTATGGGATCACCAG versus TATC043-F GCCATCCTCCTGCAAATAAG

Matches = 10

Score = 8

NCCATNCTCCTG

est. tm = 22.1 oC

DeltaG @37 degrees = -6.19 kcal/mole

5'-GCCATCCTCCTGCAAATAAG-3'

x||||x||||||

3'-GACCACTAGGGTATGAGGAC-5'

GATA124E07-R ATATTCTTATATTCCATATGGCACA versus GATA124E07-R ATATTCTTATATTCCATATGGCACA

Matches = 12

Score = 8

TNTNCCATATGGNANA

est. tm = less than zero

DeltaG @37 degrees = -0.76 kcal/mole

3'-ACACGGTATACCTTATATTCTTATA-5'

|x|x||||||||x|x|

5'-ATATTCTTATATTCCATATGGCACA-3'

AAT193-R GCAAGGATGCAGAAGGAAAG versus GATA11E09-R CATCCTTCCTGGTCCCTAGT

Matches = 8

Score = 7

CATCCTTNC

est. tm = less than 0 oC

DeltaG @37 degrees = -2.91 kcal/mole

5'-CATCCTTCCTGGTCCCTAGT-3'

|||||||x|

3'-GAAAGGAAGACGTAGGAACG-5'

AAT193-R GCAAGGATGCAGAAGGAAAG versus GATA64H04-R TCTTCATACATGCTTTATCATGC

Matches = 10

Score = 7

TCTNCATNCNTGC

est. tm = less than 0 oC

DeltaG @37 degrees = -1.77 kcal/mole

5'-TCTTCATACATGCTTTATCATGC-3'

|||x|||x|x|||

3'-GAAAGGAAGACGTAGGAACG-5'

ATTT030-F GGGTCCATTAGTTGAGTATGCAG versus GATA72E05-R AATCAGTGCTTTCTGTACTATTGG

Matches = 13

Score = 7

CCANTAGTNNAGNANGCAN

est. tm = 10.0 oC

DeltaG @37 degrees = -3.29 kcal/mole

3'-GGTTATCATGTCTTTCGTGACTAA-5'

|||x||||xx||x|x|||x

5'-GGGTCCATTAGTTGAGTATGCAG-3'

GATA48E02-F AATTCCTTTACTCCAGAAAGG versus GATA72E05-R AATCAGTGCTTTCTGTACTATTGG

Matches = 12

Score = 7

CCNNTANTNCAGAAAGN

est. tm = 5.7 oC

DeltaG @37 degrees = -2.45 kcal/mole

3'-GGTTATCATGTCTTTCGTGACTAA-5'

||xx||x|x|||||||x

5'-AATTCCTTTACTCCAGAAAGG-3'

GATA7G10-R GCCCAAAAAGACAGACAGAA versus GATA72E05-R AATCAGTGCTTTCTGTACTATTGG

Matches = 13

Score = 8

CCAANANNACAGANAGNA

est. tm = 3.6 oC

DeltaG @37 degrees = -2.04 kcal/mole

3'-GGTTATCATGTCTTTCGTGACTAA-5'

||||x|xx|||||x||x|

5'-GCCCAAAAAGACAGACAGAA-3'

GATA172D05-R ATAATTGAAAGCCCGGATTC versus GATA72E05-R AATCAGTGCTTTCTGTACTATTGG

Matches = 13

Score = 7

AATCNGNGCTTTCNNTNNT

est. tm = less than 0 oC

DeltaG @37 degrees = -0.26 kcal/mole

5'-AATCAGTGCTTTCTGTACTATTGG-3'

||||x|x||||||xx|xx|

3'-CTTAGGCCCGAAAGTTAATA-5'

GATA29A01-F CTGTGCCTCTATTGCCTCAT versus GATA31F01-R CTAGAGGGACAGAACCAATAGG

Matches = 10

Score = 8

NTAGAGGNACAG

est. tm = 18.4 oC

DeltaG @37 degrees = -5.36 kcal/mole

5'-CTAGAGGGACAGAACCAATAGG-3'

x||||||x||||

3'-TACTCCGTTATCTCCGTGTC-5'

GATA164A09-R CTCAGTTCAAGGAAATGGGA versus GATA68F07-F ATTGCTTCCCCTTTACCTGA

Matches = 11

Score = 8

TCANGNAAANGGGA

est. tm = 0.5 oC

DeltaG @37 degrees = -2.58 kcal/mole

3'-AGTCCATTTCCCCTTCGTTA-5'

|||x|x|||x||||

5'-CTCAGTTCAAGGAAATGGGA-3'

GATA164A09-R CTCAGTTCAAGGAAATGGGA versus AAT071-F GTTGCACTGAGCAGAGATCG

Matches = 9

Score = 7

NTTGNACTGAG

est. tm = 11.9 oC

DeltaG @37 degrees = -4.41 kcal/mole

5'-GTTGCACTGAGCAGAGATCG-3'

x|||x||||||

3'-AGGGTAAAGGAACTTGACTC-5'

GATA164A09-R CTCAGTTCAAGGAAATGGGA versus ATA27C11-R TCAATTAGCTTGACCTGATGG

Matches = 13

Score = 7

NCNATTNNCTTGANCTGAN

est. tm = 13.7 oC

DeltaG @37 degrees = -3.68 kcal/mole

5'-TCAATTAGCTTGACCTGATGG-3'

x|x|||xx|||||x||||x

3'-AGGGTAAAGGAACTTGACTC-5'

GATA133A08N-F TTTTTGAAAGTGGCGAAGTC versus CTAT014-R CAGCTTTCAAACAGTGCAGGT

Matches = 10

Score = 7

CNNCTTTCAAANA

est. tm = less than 0 oC

DeltaG @37 degrees = -1.27 kcal/mole

5'-CAGCTTTCAAACAGTGCAGGT-3'

|xx||||||||x|

3'-CTGAAGCGGTGAAAGTTTTT-5'

ATA26D07-R GGCCCTGTGTAGAAGCTGTA versus CTAT014-R CAGCTTTCAAACAGTGCAGGT

Matches = 13

Score = 8

CAGCTTNNANACAGNGCN

est. tm = 23.9 oC

DeltaG @37 degrees = -6.08 kcal/mole

5'-CAGCTTTCAAACAGTGCAGGT-3'

||||||xx|x||||x||x

3'-ATGTCGAAGATGTGTCCCGG-5'

TTTA062-R GCACCTCTAGGCTGAGCAAC versus GATA87E02N-F GTTGTTGCTGGGCTTAGAAA

Matches = 12

Score = 7

NNTCTANGCNNAGCAAC

est. tm = 20.0 oC

DeltaG @37 degrees = -5.12 kcal/mole

3'-AAAGATTCGGGTCGTTGTTG-5'

xx||||x||xx||||||

5'-GCACCTCTAGGCTGAGCAAC-3'

TTTA062-R GCACCTCTAGGCTGAGCAAC versus GATA172D05-F TAGTGGTGATGGTTGCACAG

Matches = 8

Score = 7

CTGNGCAAC

est. tm = 7.3 oC

DeltaG @37 degrees = -4.04 kcal/mole

3'-GACACGTTGGTAGTGGTGAT-5'

|||x|||||

5'-GCACCTCTAGGCTGAGCAAC-3'

GATA81D05-R CTCAAGTCCCAAAAATGAGG versus GATA25A04-F TAGCACTTGAGCACACATGG

Matches = 9

Score = 7

TNGNACTTGAG

est. tm = less than 0 oC

DeltaG @37 degrees = -1.92 kcal/mole

5'-TAGCACTTGAGCACACATGG-3'

|x|x|||||||

3'-GGAGTAAAAACCCTGAACTC-5'

UT721-F TTGGTCTCCTCTGATGGGT versus GATA30F10A-R TCTTATCTCCACCCACCAGA

Matches = 9

Score = 8

TCTGNTGGGT

est. tm = 15.0 oC

DeltaG @37 degrees = -5.36 kcal/mole

3'-AGACCACCCACCTCTATTCT-5'

||||x|||||

5'-TTGGTCTCCTCTGATGGGT-3'

GATA30F10A-R TCTTATCTCCACCCACCAGA versus GATA7G10-F ACAGAAGTCTGGGATGTGGA

Matches = 10

Score = 7

TCCACNNNCCAGA

est. tm = 16.0 oC

DeltaG @37 degrees = -5.03 kcal/mole

3'-AGGTGTAGGGTCTGAAGACA-5'

|||||xxx|||||

5'-TCTTATCTCCACCCACCAGA-3'

GATA30F10A-R TCTTATCTCCACCCACCAGA versus ATA10H11-R CATTCTGGTTGGGGAACATA

Matches = 13

Score = 9

TATNTNCNCCNACCAGA

est. tm = 2.4 oC

DeltaG @37 degrees = -2.20 kcal/mole

3'-ATACAAGGGGTTGGTCTTAC-5'

|||x|x|x||x||||||

5'-TCTTATCTCCACCCACCAGA-3'

ATA25F04-R AGACCCAGTTGATGCAATGT versus GATA31E10-R TGACAGTAAAATGAACACATTGC

Matches = 7

Score = 7

GCAATGT

est. tm = 8.5 oC

DeltaG @37 degrees = -4.53 kcal/mole

3'-CGTTACACAAGTAAAATGACAGT-5'

|||||||

5'-AGACCCAGTTGATGCAATGT-3'

GATA29A05-F TTTTGTTTCTTGATCTGGGC versus AATA058-F CCCATCTCAGGAAGGGAAAC

Matches = 13

Score = 7

CCCANNTCANGAANNNAAA

est. tm = 8.7 oC

DeltaG @37 degrees = -2.51 kcal/mole

5'-CCCATCTCAGGAAGGGAAAC-3'

||||xx|||x|||xxx|||

3'-CGGGTCTAGTTCTTTGTTTT-5'

GATA29A05-F TTTTGTTTCTTGATCTGGGC versus GGAA21G11-R CCAGTTTAGGCAACAGAACA

Matches = 13

Score = 8

CCAGNTNANGNAACANAA

est. tm = less than 0 oC

DeltaG @37 degrees = -0.45 kcal/mole

5'-CCAGTTTAGGCAACAGAACA-3'

||||x|x|x|x||||x||

3'-CGGGTCTAGTTCTTTGTTTT-5'

ATA42G12N-R ATGTTGTTCACATGTACCC versus ATA79C10-F GCCTTCATGGAGGTTACATG

Matches = 8

Score = 7

CATGTANCC

est. tm = less than zero

DeltaG @37 degrees = -2.80 kcal/mole

3'-GTACATTGGAGGTACTTCCG-5'

||||||x||

5'-ATGTTGTTCACATGTACCC-3'

ATA79C10-F GCCTTCATGGAGGTTACATG versus GGAA4B09N-R CACACTCAAAATACATGAAGGC

Matches = 14

Score = 8

GCCTTCATGNANNTTNNNTG

est. tm = 17.4 oC

DeltaG @37 degrees = -3.98 kcal/mole

3'-CGGAAGTACATAAAACTCACAC-5'

|||||||||x|xx||xxx||

5'-GCCTTCATGGAGGTTACATG-3'

ATA79C10-F GCCTTCATGGAGGTTACATG versus GATA29A01-R TGAAGGCCAAGCACTATTTT

Matches = 7

Score = 7

TGAAGGC

est. tm = 12.0 oC

DeltaG @37 degrees = -5.17 kcal/mole

5'-TGAAGGCCAAGCACTATTTT-3'

|||||||

3'-GTACATTGGAGGTACTTCCG-5'

GATA72H07-F AAAGCACAGTCCACACTCCT versus GATA46A12-F CTTGTGGGCTGTAGTTTGCT

Matches = 12

Score = 7

NNTGTGGNCTGTNNTTT

est. tm = 17.2 oC

DeltaG @37 degrees = -4.62 kcal/mole

5'-CTTGTGGGCTGTAGTTTGCT-3'

xx|||||x||||xx|||

3'-TCCTCACACCTGACACGAAA-5'

GATA72H07-F AAAGCACAGTCCACACTCCT versus GATA23B01N-F GTGTAAGCAGTGTGCAGTGG

Matches = 11

Score = 7

NCANTNCACACTNCT

est. tm = 4.3 oC

DeltaG @37 degrees = -3.01 kcal/mole

3'-GGTGACGTGTGACGAATGTG-5'

x||x|x||||||x||

5'-AAAGCACAGTCCACACTCCT-3'

GATA6A05-F CTGCCAGAGAATAGGGTGAA versus GGAA29H03N-F ACCTGTTGTATGGCAGCAGT

Matches = 12

Score = 8

NCCTNTTNTNTGGCAG

est. tm = 18.7 oC

DeltaG @37 degrees = -5.33 kcal/mole

5'-ACCTGTTGTATGGCAGCAGT-3'

x|||x||x|x||||||

3'-AAGTGGGATAAGAGACCGTC-5'

GATA133A08N-F TTTTTGAAAGTGGCGAAGTC versus ATA12D05-F AAAGTGAGACTCCGCCTCAT

Matches = 10

Score = 7

ANGNGGCGNAGTC

est. tm = 3.6 oC

DeltaG @37 degrees = -3.42 kcal/mole

3'-TACTCCGCCTCAGAGTGAAA-5'

|x|x||||x||||

5'-TTTTTGAAAGTGGCGAAGTC-3'

GATA43A04-F GGAAAGCCTGTAGGAAGAGG versus GATA64H04-R TCTTCATACATGCTTTATCATGC

Matches = 14

Score = 10

TCTTCNTACANGCTTTNN

est. tm = 27.7 oC

DeltaG @37 degrees = -6.69 kcal/mole

5'-TCTTCATACATGCTTTATCATGC-3'

|||||x||||x|||||xx

3'-GGAGAAGGATGTCCGAAAGG-5'

GGAA22G10N-F AGTCAGCTTGATTGATCCAG versus ATA26D07-F AGAGTGAGATTCTGTCTCAATTAA

Matches = 10

Score = 7

TTNATTGANNCAG

est. tm = less than zero

DeltaG @37 degrees = -1.57 kcal/mole

3'-AATTAACTCTGTCTTAGAGTGAGA-5'

||x|||||xx|||

5'-AGTCAGCTTGATTGATCCAG-3'

ATA4E02-F TACTCAGGAGGCAGAGATGG versus GATA11C06N-F GATCCCAAGCTCTTCCTCTT

Matches = 11

Score = 7

ANGAGGNAGAGNTNG

est. tm = less than zero

DeltaG @37 degrees = -0.50 kcal/mole

3'-TTCTCCTTCTCGAACCCTAG-5'

|x||||x||||x|x|

5'-TACTCAGGAGGCAGAGATGG-3'

ATA4E02-F TACTCAGGAGGCAGAGATGG versus GATA176C01-R CTCTATCTCTATCTCTGTCTCTGCC

Matches = 9

Score = 7

GGCAGAGANNG

est. tm = 14.5 oC

DeltaG @37 degrees = -4.89 kcal/mole

3'-CCGTCTCTGTCTCTATCTCTATCTC-5'

||||||||xx|

5'-TACTCAGGAGGCAGAGATGG-3'

ATA4E02-F TACTCAGGAGGCAGAGATGG versus ATA12D05-R CACCTCAGCCTCTTTGGTAG

Matches = 14

Score = 9

CANCTCNGCCTCNTNNGTA

est. tm = 12.6 oC

DeltaG @37 degrees = -3.43 kcal/mole

5'-CACCTCAGCCTCTTTGGTAG-3'

||x|||x|||||x|xx|||

3'-GGTAGAGACGGAGGACTCAT-5'

ATA4E02-F TACTCAGGAGGCAGAGATGG versus GATA129D11N-R TAGTACTCTACCATCCATCTATCCC

Matches = 9

Score = 7

GGNANAGATGG

est. tm = less than zero

DeltaG @37 degrees = -2.76 kcal/mole

3'-CCCTATCTACCTACCATCTCATGAT-5'

||x|x||||||

5'-TACTCAGGAGGCAGAGATGG-3'

GATA4A10-F TCCCCTTTGAAAGTCCTACC versus GATA4H09-F CAAAGAGGACATGTGTTTGTG

Matches = 8

Score = 7

CAAAGNGGA

est. tm = less than 0 oC

DeltaG @37 degrees = -2.99 kcal/mole

5'-CAAAGAGGACATGTGTTTGTG-3'

|||||x|||

3'-CCATCCTGAAAGTTTCCCCT-5'

GATA4H09-F CAAAGAGGACATGTGTTTGTG versus GATA63F09-F TTCACATGCATATGTCTTTATGG

Matches = 14

Score = 7

CNANNANGACATNTGNNTGTG

est. tm = less than zero

DeltaG @37 degrees = -0.29 kcal/mole

3'-GGTATTTCTGTATACGTACACTT-5'

|x|xx|x|||||x||xx||||

5'-CAAAGAGGACATGTGTTTGTG-3'

GATA187D09N-R CCACAAATACATTTCCCTGA versus GATA4H09-F CAAAGAGGACATGTGTTTGTG

Matches = 13

Score = 7

CACAAANACATNTCCNNNN

est. tm = 20.9 oC

DeltaG @37 degrees = -5.01 kcal/mole

3'-GTGTTTGTGTACAGGAGAAAC-5'

||||||x||||x|||xxxx

5'-CCACAAATACATTTCCCTGA-3'

AAT243-F AATCGCTTGAACCCAGGAG versus GATA176C01-F TCTCACTACACCACCTGGGT

Matches = 8

Score = 7

ACCCAGGNG

est. tm = 8.7 oC

DeltaG @37 degrees = -4.75 kcal/mole

3'-TGGGTCCACCACATCACTCT-5'

|||||||x|

5'-AATCGCTTGAACCCAGGAG-3'

AAT243-F AATCGCTTGAACCCAGGAG versus GATA43C11-F TTCAAGTGGTTGGGTTCACT

Matches = 9

Score = 7

TTCAAGNGNTT

est. tm = less than 0 oC

DeltaG @37 degrees = -1.15 kcal/mole

5'-TTCAAGTGGTTGGGTTCACT-3'

||||||x|x||

3'-GAGGACCCAAGTTCGCTAA-5'

AAT243-F AATCGCTTGAACCCAGGAG versus GATA63D12-F ACTACTCCAAGGTTCCAGCC

Matches = 12

Score = 8

NGCTNGAACCNNGGAG

est. tm = 25.1 oC

DeltaG @37 degrees = -6.49 kcal/mole

3'-CCGACCTTGGAACCTCATCA-5'

x|||x|||||xx||||

5'-AATCGCTTGAACCCAGGAG-3'

GATA47F05-F TGGGTTATGAGTGCACACAG versus GATA50F11-F ATACATTTATATTTGCATCTGTGTG

Matches = 7

Score = 7

CACACAG

est. tm = 10.3 oC

DeltaG @37 degrees = -4.66 kcal/mole

3'-GTGTGTCTACGTTTATATTTACATA-5'

|||||||

5'-TGGGTTATGAGTGCACACAG-3'

AAAT007-R AGGCTCATCCACAGAGATGG versus GATA50F11-F ATACATTTATATTTGCATCTGTGTG

Matches = 9

Score = 7

CACANAGATGN

est. tm = 14.0 oC

DeltaG @37 degrees = -4.84 kcal/mole

3'-GTGTGTCTACGTTTATATTTACATA-5'

||||x|||||x

5'-AGGCTCATCCACAGAGATGG-3'

UT1772-R GGGTGCTAGGTGTGCTCA versus sRA-F CACTAGCACCCAGAACCGTC

Matches = 9

Score = 7

NNCTAGCACCC

est. tm = 26.5 oC

DeltaG @37 degrees = -7.10 kcal/mole

5'-CACTAGCACCCAGAACCGTC-3'

xx|||||||||

3'-ACTCGTGTGGATCGTGGG-5'

GATA116B01N-F ATGGCCTATTGTGGGATCTT versus ATA7D07-F ATCCCACAGGATGCCTATTT

Matches = 12

Score = 7

ATCCCACANNANGCCNN

est. tm = 26.4 oC

DeltaG @37 degrees = -6.86 kcal/mole

5'-ATCCCACAGGATGCCTATTT-3'

||||||||xx|x|||xx

3'-TTCTAGGGTGTTATCCGGTA-5'

GATA11H10-F TAACCTTGTGAGCCAATTCC versus GGAA20G04-R TTCACAAGGTTCCACAAGGT

Matches = 10

Score = 8

NTCACAAGGTTN

est. tm = 33.4 oC

DeltaG @37 degrees = -8.51 kcal/mole

5'-TTCACAAGGTTCCACAAGGT-3'

x||||||||||x

3'-CCTTAACCGAGTGTTCCAAT-5'

GATA86E02N-F AATGGATGGACAAATGGATG versus GGAA20C10-F AGCAAACTTCATCCACTTGG

Matches = 9

Score = 7

NCAANTGGATG

est. tm = 12.4 oC

DeltaG @37 degrees = -4.55 kcal/mole

3'-GGTTCACCTACTTCAAACGA-5'

x|||x||||||

5'-AATGGATGGACAAATGGATG-3'

GATA86E02N-F AATGGATGGACAAATGGATG versus GAAT1A4N-F ATTCGTTCACTCATTTGTCC

Matches = 11

Score = 9

GGACAAATGNNTG

est. tm = 21.1 oC

DeltaG @37 degrees = -5.48 kcal/mole

3'-CCTGTTTACTCACTTGCTTA-5'

|||||||||xx||

5'-AATGGATGGACAAATGGATG-3'

GATA86E02N-F AATGGATGGACAAATGGATG versus GAAT1A4N-F ATTCGTTCACTCATTTGTCC

Matches = 11

Score = 7

ATTNGTNCANNCATT

est. tm = less than 0 oC

DeltaG @37 degrees = -0.27 kcal/mole

5'-ATTCGTTCACTCATTTGTCC-3'

|||x||x||xx||||

3'-GTAGGTAAACAGGTAGGTAA-5'

GATA86E02N-F AATGGATGGACAAATGGATG versus GATA31A10-R ACATGTGTCCATCAAATGATG

Matches = 13

Score = 9

NCATNTGTCCATCNANT

est. tm = 17.0 oC

DeltaG @37 degrees = -4.62 kcal/mole

5'-ACATGTGTCCATCAAATGATG-3'

x|||x||||||||x|x|

3'-GTAGGTAAACAGGTAGGTAA-5'

GATA86E02N-F AATGGATGGACAAATGGATG versus GATA129D11N-R TAGTACTCTACCATCCATCTATCCC

Matches = 11

Score = 8

NGGANANATGGATG

est. tm = 16.1 oC

DeltaG @37 degrees = -4.84 kcal/mole

3'-CCCTATCTACCTACCATCTCATGAT-5'

x|||x|x|||||||

5'-AATGGATGGACAAATGGATG-3'

GATA86E02N-F AATGGATGGACAAATGGATG versus AGAT120-R TTGTCTGTCATCTATCTACCCATC

Matches = 12

Score = 8

GATGGNNANATNGATG

est. tm = 3.5 oC

DeltaG @37 degrees = -1.96 kcal/mole

3'-CTACCCATCTATCTACTGTCTGTT-5'

|||||xx|x||x||||

5'-AATGGATGGACAAATGGATG-3'

GATA86E02N-F AATGGATGGACAAATGGATG versus GGAT3F08-R TATCCATCCATCCATCAACC

Matches = 10

Score = 8

TNTCCATCCATN

est. tm = 21.5 oC

DeltaG @37 degrees = -6.15 kcal/mole

5'-TATCCATCCATCCATCAACC-3'

|x|||||||||x

3'-GTAGGTAAACAGGTAGGTAA-5'

ATA27D04N-F TAACTATGTCATCTAGCCAAATGA versus ATA27D04N-F TAACTATGTCATCTAGCCAAATGA

Matches = 12

Score = 8

TCATNTNGCNANATGA

est. tm = less than zero

DeltaG @37 degrees = -1.37 kcal/mole

3'-AGTAAACCGATCTACTGTATCAAT-5'

||||x|x||x|x||||

5'-TAACTATGTCATCTAGCCAAATGA-3'

ATA27D04N-F TAACTATGTCATCTAGCCAAATGA versus GATA3F01-F TGTCATAGTTTAGAACGAACTAACG

Matches = 9

Score = 7

TGNCATAGTTN

est. tm = 6.5 oC

DeltaG @37 degrees = -3.62 kcal/mole

5'-TGTCATAGTTTAGAACGAACTAACG-3'

||x|||||||x

3'-AGTAAACCGATCTACTGTATCAAT-5'

ATA27D04N-F TAACTATGTCATCTAGCCAAATGA versus GATA6B02-F TAGATAGATGATGTTGTTGTTGATG

Matches = 13

Score = 7

TNGNTAGATGANNTNGTTN

est. tm = less than 0 oC

DeltaG @37 degrees = -0.94 kcal/mole

5'-TAGATAGATGATGTTGTTGTTGATG-3'

|x|x|||||||xx|x|||x

3'-AGTAAACCGATCTACTGTATCAAT-5'

GATA6D09-F CTGTCCTCTAGGCTCATTTAGC versus ATA27D04N-F TAACTATGTCATCTAGCCAAATGA

Matches = 8

Score = 7

TCATTTNGC

est. tm = less than zero

DeltaG @37 degrees = -2.98 kcal/mole

3'-AGTAAACCGATCTACTGTATCAAT-5'

||||||x||

5'-CTGTCCTCTAGGCTCATTTAGC-3'

GATA43A04-R CCTGGATGACAGAGTGCTCT versus ATA27D04N-F TAACTATGTCATCTAGCCAAATGA

Matches = 12

Score = 7

NNACTNTGTCATCNAGN

est. tm = 21.1 oC

DeltaG @37 degrees = -5.52 kcal/mole

5'-TAACTATGTCATCTAGCCAAATGA-3'

xx|||x|||||||x||x

3'-TCTCGTGAGACAGTAGGTCC-5'

GTTTT001-R AGCCTGGGTGACAGAGTGAA versus ATA27D04N-F TAACTATGTCATCTAGCCAAATGA

Matches = 13

Score = 7

TNACTNTGTCANCNAGNCN

est. tm = less than 0 oC

DeltaG @37 degrees = -1.34 kcal/mole

5'-TAACTATGTCATCTAGCCAAATGA-3'

|x|||x|||||x|x||x|x

3'-AAGTGAGACAGTGGGTCCGA-5'

GATA176C01-F TCTCACTACACCACCTGGGT versus ATA25F04-R AGACCCAGTTGATGCAATGT

Matches = 13

Score = 8

NCANTNCANCANCTGGGT

est. tm = 12.8 oC

DeltaG @37 degrees = -4.14 kcal/mole

3'-TGTAACGTAGTTGACCCAGA-5'

x||x|x||x||x||||||

5'-TCTCACTACACCACCTGGGT-3'

GGAA20G04-F CATTGGTCCAGGTAAACTGC versus GGAA8G07-R CCCTGGACTCATGGTACTTG

Matches = 10

Score = 7

NCCTGGACNNATG

est. tm = 19.9 oC

DeltaG @37 degrees = -5.68 kcal/mole

5'-CCCTGGACTCATGGTACTTG-3'

x|||||||xx|||

3'-CGTCAAATGGACCTGGTTAC-5'

GATA48E02-F AATTCCTTTACTCCAGAAAGG versus GATA52A04-F TTTGGGATAAAAGGTATTTTGC

Matches = 13

Score = 8

TTNNGGANNAAAGGNATT

est. tm = 5.3 oC

DeltaG @37 degrees = -2.07 kcal/mole

5'-TTTGGGATAAAAGGTATTTTGC-3'

||xx|||xx|||||x|||

3'-GGAAAGACCTCATTTCCTTAA-5'

GATA4G12-F TAAATCACTAGCCTTTGCCG versus GATA29B01-F GCGAAGGCCATTAATTTCTT

Matches = 13

Score = 8

GCNAAGGCNANTNATTTN

est. tm = 12.6 oC

DeltaG @37 degrees = -3.86 kcal/mole

5'-GCGAAGGCCATTAATTTCTT-3'

||x|||||x|x|x||||x

3'-GCCGTTTCCGATCACTAAAT-5'

GATA4G12-F TAAATCACTAGCCTTTGCCG versus GATA72G09N-R TTGGTGATTTAATTCCAGGC

Matches = 9

Score = 7

NTNGTGATTTA

est. tm = 2.3 oC

DeltaG @37 degrees = -2.80 kcal/mole

5'-TTGGTGATTTAATTCCAGGC-3'

x|x||||||||

3'-GCCGTTTCCGATCACTAAAT-5'

GATA23B01N-F GTGTAAGCAGTGTGCAGTGG versus GATA12H10-F ATGTAGACTGCTAACAGTGTCTGC

Matches = 12

Score = 7

NTGNANACTGCTNACAN

est. tm = 20.7 oC

DeltaG @37 degrees = -5.71 kcal/mole

5'-ATGTAGACTGCTAACAGTGTCTGC-3'

x||x|x||||||x|||x

3'-GGTGACGTGTGACGAATGTG-5'

GATA128C02N-R AAGGAACTGTTAGGGGCCT versus GATA12H10-F ATGTAGACTGCTAACAGTGTCTGC

Matches = 13

Score = 7

AGNCNNCTAACAGTNNCTN

est. tm = 9.2 oC

DeltaG @37 degrees = -2.75 kcal/mole

5'-ATGTAGACTGCTAACAGTGTCTGC-3'

||x|xx||||||||xx||x

3'-TCCGGGGATTGTCAAGGAA-5'

GAAT1A4N-R CCCAAGGGCAGAAATTATTA versus GATA12H10-F ATGTAGACTGCTAACAGTGTCTGC

Matches = 10

Score = 7

GCAGANANTNTTA

est. tm = less than zero

DeltaG @37 degrees = -1.05 kcal/mole

3'-CGTCTGTGACAATCGTCAGATGTA-5'

|||||x|x|x|||

5'-CCCAAGGGCAGAAATTATTA-3'

GATA178G09-F ATGGGTGGATGTACAAATGG versus GATA32C10-F CTATTCATTCAATCATACACCCA

Matches = 13

Score = 7

TGGGTGNATGNNNNAATGN

est. tm = 21.4 oC

DeltaG @37 degrees = -5.33 kcal/mole

3'-ACCCACATACTAACTTACTTATC-5'

||||||x|||xxxx||||x

5'-ATGGGTGGATGTACAAATGG-3'

GATA178G09-F ATGGGTGGATGTACAAATGG versus ATA21A03-R TGCATCCACCTTTGCTATAA

Matches = 10

Score = 7

TNCATCCACCNNT

est. tm = 4.0 oC

DeltaG @37 degrees = -3.30 kcal/mole

5'-TGCATCCACCTTTGCTATAA-3'

|x||||||||xx|

3'-GGTAAACATGTAGGTGGGTA-5'

GATA178G09-F ATGGGTGGATGTACAAATGG versus GGAT3F08-R TATCCATCCATCCATCAACC

Matches = 9

Score = 7

NATCCANCCAT

est. tm = 11.7 oC

DeltaG @37 degrees = -4.71 kcal/mole

5'-TATCCATCCATCCATCAACC-3'

x|||||x||||

3'-GGTAAACATGTAGGTGGGTA-5'

GATA178G09-F ATGGGTGGATGTACAAATGG versus GGAT3F08-R TATCCATCCATCCATCAACC

Matches = 12

Score = 9

TNTNCATCCANCCAT

est. tm = 9.2 oC

DeltaG @37 degrees = -3.62 kcal/mole

5'-TATCCATCCATCCATCAACC-3'

|x|x||||||x||||

3'-GGTAAACATGTAGGTGGGTA-5'

GATA178G09-F ATGGGTGGATGTACAAATGG versus GGAT3F08-R TATCCATCCATCCATCAACC

Matches = 12

Score = 7

GGTNGATGNANNNATGG

est. tm = 5.4 oC

DeltaG @37 degrees = -2.37 kcal/mole

3'-CCAACTACCTACCTACCTAT-5'

|||x||||x|xxx||||

5'-ATGGGTGGATGTACAAATGG-3'

GATA131D09-F AAAAATCTGACTCTATTCAAATGTT versus GATA131D09-F AAAAATCTGACTCTATTCAAATGTT

Matches = 16

Score = 8

AANATNTGANTNNANTCANATNTT

est. tm = less than zero

DeltaG @37 degrees = greater than zero

3'-TTGTAAACTTATCTCAGTCTAAAAA-5'

||x||x|||x|xx|x|||x||x||

5'-AAAAATCTGACTCTATTCAAATGTT-3'

ATA26D07-F AGAGTGAGATTCTGTCTCAATTAA versus GATA131D09-F AAAAATCTGACTCTATTCAAATGTT

Matches = 11

Score = 8

NANAATCTNACTCT

est. tm = 10.0 oC

DeltaG @37 degrees = -3.66 kcal/mole

5'-AAAAATCTGACTCTATTCAAATGTT-3'

x|x|||||x|||||

3'-AATTAACTCTGTCTTAGAGTGAGA-5'

GATA48E02-R CAGATTTCTGCTTTCCCAGA versus GATA131D09-F AAAAATCTGACTCTATTCAAATGTT

Matches = 8

Score = 7

ANAAATCTG

est. tm = less than 0 oC

DeltaG @37 degrees = -2.03 kcal/mole

5'-AAAAATCTGACTCTATTCAAATGTT-3'

|x|||||||

3'-AGACCCTTTCGTCTTTAGAC-5'

GATA27C08N-F GGCAGGCAGGTAGATAGACA versus GATA176C01-R CTCTATCTCTATCTCTGTCTCTGCC

Matches = 14

Score = 8

GGCAGNNANNNAGATAGANA

est. tm = 14.5 oC

DeltaG @37 degrees = -3.45 kcal/mole

3'-CCGTCTCTGTCTCTATCTCTATCTC-5'

|||||xx|xxx|||||||x|

5'-GGCAGGCAGGTAGATAGACA-3'

GATA27C08N-F GGCAGGCAGGTAGATAGACA versus GATA24F03-R TACCTACCTACCTACCTCTATGGC

Matches = 10

Score = 8

TACCTNCCTNCC

est. tm = 7.6 oC

DeltaG @37 degrees = -3.93 kcal/mole

5'-TACCTACCTACCTACCTCTATGGC-3'

|||||x|||x||

3'-ACAGATAGATGGACGGACGG-5'

GATA27C08N-F GGCAGGCAGGTAGATAGACA versus GATA24F03-R TACCTACCTACCTACCTCTATGGC

Matches = 13

Score = 10

TANCTACCTNCCTNCC

est. tm = 15.0 oC

DeltaG @37 degrees = -4.29 kcal/mole

5'-TACCTACCTACCTACCTCTATGGC-3'

||x||||||x|||x||

3'-ACAGATAGATGGACGGACGG-5'

GATA27C08N-F GGCAGGCAGGTAGATAGACA versus GATA21F03-R CCTGCCTGCCTATCTATCTG

Matches = 10

Score = 10

CCTGCCTGCC

est. tm = 42.5 oC

DeltaG @37 degrees = -10.69 kcal/mole

5'-CCTGCCTGCCTATCTATCTG-3'

||||||||||

3'-ACAGATAGATGGACGGACGG-5'

GATA27C08N-F GGCAGGCAGGTAGATAGACA versus GATA21F03-R CCTGCCTGCCTATCTATCTG

Matches = 12

Score = 10

CAGNTAGATAGNCA

est. tm = 11.7 oC

DeltaG @37 degrees = -3.42 kcal/mole

3'-GTCTATCTATCCGTCCGTCC-5'

|||x|||||||x||

5'-GGCAGGCAGGTAGATAGACA-3'

AAT107-F GGTTGTGGTGAGCCAAGATT versus ATA10H11-F GGTGACAGAGACTCTTGTCTCA

Matches = 10

Score = 8

TGAGNCAAGANT

est. tm = 2.4 oC

DeltaG @37 degrees = -2.90 kcal/mole

3'-ACTCTGTTCTCAGAGACAGTGG-5'

||||x|||||x|

5'-GGTTGTGGTGAGCCAAGATT-3'

GATA128C02N-F AGACCCCAAAATTACTTGAG versus ATA26D07-F AGAGTGAGATTCTGTCTCAATTAA

Matches = 8

Score = 7

TTANTTGAG

est. tm = less than zero

DeltaG @37 degrees = -1.76 kcal/mole

3'-AATTAACTCTGTCTTAGAGTGAGA-5'

|||x|||||

5'-AGACCCCAAAATTACTTGAG-3'

GATA68F07-F ATTGCTTCCCCTTTACCTGA versus GATA70E01-F CCCACTACAACTTCAGGTAGA

Matches = 8

Score = 7

TNTACCTGA

est. tm = less than zero

DeltaG @37 degrees = -2.95 kcal/mole

3'-AGATGGACTTCAACATCACCC-5'

|x|||||||

5'-ATTGCTTCCCCTTTACCTGA-3'

GATA68F07-F ATTGCTTCCCCTTTACCTGA versus GATA29A01-R TGAAGGCCAAGCACTATTTT

Matches = 11

Score = 7

TNAAGGNNAAGCANT

est. tm = less than 0 oC

DeltaG @37 degrees = -2.25 kcal/mole

5'-TGAAGGCCAAGCACTATTTT-3'

|x||||xx|||||x|

3'-AGTCCATTTCCCCTTCGTTA-5'

GATA68F07-F ATTGCTTCCCCTTTACCTGA versus GATA49D12N-R AGATAGAGGGAAAGGCATATGTG

Matches = 13

Score = 8

AGNTANAGGGNAAGNNAT

est. tm = less than 0 oC

DeltaG @37 degrees = -0.88 kcal/mole

5'-AGATAGAGGGAAAGGCATATGTG-3'

||x||x||||x|||xx||

3'-AGTCCATTTCCCCTTCGTTA-5'

GATA22F11NZ-F CCTGCCTCATCTCTTCAGGA versus GGAA8G07-F ATGCAAAGATGAACCAGGAA

Matches = 13

Score = 8

NTGNANAGATGANNCAGG

est. tm = 16.0 oC

DeltaG @37 degrees = -4.25 kcal/mole

5'-ATGCAAAGATGAACCAGGAA-3'

x||x|x||||||xx||||

3'-AGGACTTCTCTACTCCGTCC-5'

UT1772-F ATGAGGCTGGCAGACTCG versus GATA22F11NZ-F CCTGCCTCATCTCTTCAGGA

Matches = 9

Score = 8

CCNGCCTCAT

est. tm = 17.1 oC

DeltaG @37 degrees = -5.61 kcal/mole

5'-CCTGCCTCATCTCTTCAGGA-3'

||x|||||||

3'-GCTCAGACGGTCGGAGTA-5'

GATA22F11NZ-F CCTGCCTCATCTCTTCAGGA versus GATA86E02N-R CCCTTCATAATTAGATGAGCC

Matches = 12

Score = 7

GNCTCATCTNNTNANGA

est. tm = less than zero

DeltaG @37 degrees = -0.07 kcal/mole

3'-CCGAGTAGATTAATACTTCCC-5'

|x|||||||xx|x|x||

5'-CCTGCCTCATCTCTTCAGGA-3'

UT6540-F TTCCTCTGGCTTCTAGAAG versus GATA6G12-F AGCCTGAGCAAAACAGTGAA

Matches = 9

Score = 7

AGCCNGAGNAA

est. tm = less than 0 oC

DeltaG @37 degrees = -3.01 kcal/mole

5'-AGCCTGAGCAAAACAGTGAA-3'

||||x|||x||

3'-GAAGATCTTCGGTCTCCTT-5'

GATA6G12-F AGCCTGAGCAAAACAGTGAA versus GATA31A10-F TCTAAACTCCTTTGCACAGTC

Matches = 13

Score = 7

GNCTGNGCAAANNAGTNNA

est. tm = 1.8 oC

DeltaG @37 degrees = -1.46 kcal/mole

3'-CTGACACGTTTCCTCAAATCT-5'

|x|||x|||||xx|||xx|

5'-AGCCTGAGCAAAACAGTGAA-3'

GATA6G12-F AGCCTGAGCAAAACAGTGAA versus GAAT1A4N-F ATTCGTTCACTCATTTGTCC

Matches = 11

Score = 7

GNNCAAANNAGTGAA

est. tm = 4.4 oC

DeltaG @37 degrees = -2.20 kcal/mole

3'-CCTGTTTACTCACTTGCTTA-5'

|xx||||xx||||||

5'-AGCCTGAGCAAAACAGTGAA-3'

GATA6G12-F AGCCTGAGCAAAACAGTGAA versus GATA169E06-R TGGAATTCAGTTATTTGTTAATGC

Matches = 13

Score = 7

GCNTNANCAAANNANTGAA

est. tm = less than zero

DeltaG @37 degrees = greater than zero

3'-CGTAATTGTTTATTGACTTAAGGT-5'

||x|x|x||||xx|x||||

5'-AGCCTGAGCAAAACAGTGAA-3'

MFD427-AAAT028-F AAGCAGGAGAATCGCTTGAA versus TATC043-F GCCATCCTCCTGCAAATAAG

Matches = 11

Score = 7

GCNATNCTCCTGCNN

est. tm = 22.4 oC

DeltaG @37 degrees = -6.12 kcal/mole

5'-GCCATCCTCCTGCAAATAAG-3'

||x||x|||||||xx

3'-AAGTTCGCTAAGAGGACGAA-5'

AGAT125-F GCAGAGGTTGCAGTGAGCTA versus GATA70E01-F CCCACTACAACTTCAGGTAGA

Matches = 12

Score = 7

CNCACTNCAACNTCNGN

est. tm = 1.3 oC

DeltaG @37 degrees = -2.09 kcal/mole

5'-CCCACTACAACTTCAGGTAGA-3'

|x||||x||||x||x|x

3'-ATCGAGTGACGTTGGAGACG-5'

GATA70E01-F CCCACTACAACTTCAGGTAGA versus GATA144D04-R ATCTTTCTGTACTTGCAGTGAGG

Matches = 15

Score = 9

TCTNNCTGNANTTGNAGTGNG

est. tm = 5.9 oC

DeltaG @37 degrees = -1.72 kcal/mole

5'-ATCTTTCTGTACTTGCAGTGAGG-3'

|||xx|||x|x|||x||||x|

3'-AGATGGACTTCAACATCACCC-5'

GATA87E02N-F GTTGTTGCTGGGCTTAGAAA versus GATA28F03-F TTCAGGAGTTTAGCTTTCTATGC

Matches = 8

Score = 7

GCNTAGAAA

est. tm = less than zero

DeltaG @37 degrees = -2.53 kcal/mole

3'-CGTATCTTTCGATTTGAGGACTT-5'

||x||||||

5'-GTTGTTGCTGGGCTTAGAAA-3'

GATA72H07-R AGCTCACCTCCTCCAAGAAG versus GATA28F03-F TTCAGGAGTTTAGCTTTCTATGC

Matches = 11

Score = 7

TNNAGGAGNTNAGCT

est. tm = 0.9 oC

DeltaG @37 degrees = -2.65 kcal/mole

5'-TTCAGGAGTTTAGCTTTCTATGC-3'

|xx|||||x|x||||

3'-GAAGAACCTCCTCCACTCGA-5'

ATA7D07-F ATCCCACAGGATGCCTATTT versus GATA10G07-F AATCCAGTAAATGAAATAGTCATCA

Matches = 10

Score = 8

NGATGNCTATTT

est. tm = 7.7 oC

DeltaG @37 degrees = -3.23 kcal/mole

3'-ACTACTGATAAAGTAAATGACCTAA-5'

x||||x||||||

5'-ATCCCACAGGATGCCTATTT-3'

GATA87E02N-R TTGATTGACTGCACTTTTCA versus GATA10G07-F AATCCAGTAAATGAAATAGTCATCA

Matches = 11

Score = 7

ANTNCAGTNAATNAA

est. tm = less than 0 oC

DeltaG @37 degrees = > 0 kcal/mole

5'-AATCCAGTAAATGAAATAGTCATCA-3'

|x|x||||x|||x||

3'-ACTTTTCACGTCAGTTAGTT-5'

GATA87E02N-F GTTGTTGCTGGGCTTAGAAA versus TAGA006-F TGTTGCATAATTTCTAACCCAAA

Matches = 10

Score = 7

NTNGGNTTAGAAA

est. tm = less than zero

DeltaG @37 degrees = -2.18 kcal/mole

3'-AAACCCAATCTTTAATACGTTGT-5'

x|x||x|||||||

5'-GTTGTTGCTGGGCTTAGAAA-3'

GATA4H01-R TCCCCAGTTTGGTTCAGATA versus TAGA006-F TGTTGCATAATTTCTAACCCAAA

Matches = 10

Score = 7

TTTGGNTNAGANA

est. tm = less than zero

DeltaG @37 degrees = -1.00 kcal/mole

3'-AAACCCAATCTTTAATACGTTGT-5'

|||||x|x|||x|

5'-TCCCCAGTTTGGTTCAGATA-3'

GATA8A05-F TGGTTCTGCTTTTTCTCTCC versus GATA188F04-F AACAGAACCAATAGGCTATCTATC

Matches = 9

Score = 8

ANCAGAACCA

est. tm = 10.8 oC

DeltaG @37 degrees = -4.55 kcal/mole

5'-AACAGAACCAATAGGCTATCTATC-3'

|x||||||||

3'-CCTCTCTTTTTCGTCTTGGT-5'

GATA8A05-F TGGTTCTGCTTTTTCTCTCC versus GATA11H10-R CAAAACAGAAACAGAACTAATAAGA

Matches = 10

Score = 7

NAAANCAGAANCA

est. tm = 2.4 oC

DeltaG @37 degrees = -2.68 kcal/mole

5'-CAAAACAGAAACAGAACTAATAAGA-3'

x|||x|||||x||

3'-CCTCTCTTTTTCGTCTTGGT-5'

GGAA19H07-F GACCTTTGCCCTGGATAACT versus TATC043-R AAAGGTCCTGGTATGGGTGA

Matches = 7

Score = 7

AAAGGTC

est. tm = 4.2 oC

DeltaG @37 degrees = -3.95 kcal/mole

5'-AAAGGTCCTGGTATGGGTGA-3'

|||||||

3'-TCAATAGGTCCCGTTTCCAG-5'

ATT077-F CACTGCCCCAGTGATACAAA versus ATT077-F CACTGCCCCAGTGATACAAA

Matches = 10

Score = 7

CACTGNNNCAGTG

est. tm = 15.5 oC

DeltaG @37 degrees = -4.52 kcal/mole

5'-CACTGCCCCAGTGATACAAA-3'

|||||xxx|||||

3'-AAACATAGTGACCCCGTCAC-5'

ATA20G07Z-F TTCCCTCACTATCTGCCTAA versus GATA31D10-R CTGGCTGACACTTAGGGAAA

Matches = 13

Score = 7

NNGGCNGANANTNAGGGAA

est. tm = 11.4 oC

DeltaG @37 degrees = -3.87 kcal/mole

5'-CTGGCTGACACTTAGGGAAA-3'

xx|||x||x|x|x||||||

3'-AATCCGTCTATCACTCCCTT-5'

GATA134B03-F CAAATTCCAAAAGCCTTGAT versus GATA21F05-R CTGATGGGATTTGTGCCTAT

Matches = 10

Score = 7

CTNNTGGNATTTG

est. tm = 0.6 oC

DeltaG @37 degrees = -2.14 kcal/mole

5'-CTGATGGGATTTGTGCCTAT-3'

||xx|||x|||||

3'-TAGTTCCGAAAACCTTAAAC-5'

GATA64D03-F ACATTTCCAAGGGCTACACA versus GATA138B05-F TGGAAATCTTAAGAATATCTAGGTG

Matches = 8

Score = 7

TGGAAATNT

est. tm = less than 0 oC

DeltaG @37 degrees = -2.52 kcal/mole

5'-TGGAAATCTTAAGAATATCTAGGTG-3'

|||||||x|

3'-ACACATCGGGAACCTTTACA-5'

GATA137H02N-R TCTGAGGATTCCTCCTTCCT versus GATA68A03-F TGATTACTCTGAGGAAGAAGGC

Matches = 9

Score = 7

NCCTNCTTCCT

est. tm = 12.7 oC

DeltaG @37 degrees = -4.92 kcal/mole

3'-CGGAAGAAGGAGTCTCATTAGT-5'

x|||x||||||

5'-TCTGAGGATTCCTCCTTCCT-3'

GGAA21G11-F TTTTAGGTGGCCACCATCTA versus GATA2H09-F TTGCCACTGAAAATCATATCC

Matches = 10

Score = 7

TNGCCACNNAAAA

est. tm = 4.0 oC

DeltaG @37 degrees = -3.10 kcal/mole

5'-TTGCCACTGAAAATCATATCC-3'

|x|||||xx||||

3'-ATCTACCACCGGTGGATTTT-5'

AAT013-F GCTGTGGTGAGCTGTGATTG versus GATA72H07-R AGCTCACCTCCTCCAAGAAG

Matches = 10

Score = 7

AGCTCACCNCNNC

est. tm = 9.4 oC

DeltaG @37 degrees = -4.01 kcal/mole

5'-AGCTCACCTCCTCCAAGAAG-3'

||||||||x|xx|

3'-GTTAGTGTCGAGTGGTGTCG-5'

AAT013-F GCTGTGGTGAGCTGTGATTG versus ATA12D05-R CACCTCAGCCTCTTTGGTAG

Matches = 8

Score = 7

CACCNCAGC

est. tm = 11.5 oC

DeltaG @37 degrees = -4.85 kcal/mole

5'-CACCTCAGCCTCTTTGGTAG-3'

||||x||||

3'-GTTAGTGTCGAGTGGTGTCG-5'

UT6540-F TTCCTCTGGCTTCTAGAAG versus UT6540-F TTCCTCTGGCTTCTAGAAG

Matches = 10

Score = 10

CTTCTAGAAG

est. tm = 23.1 oC

DeltaG @37 degrees = -5.22 kcal/mole

3'-GAAGATCTTCGGTCTCCTT-5'

||||||||||

5'-TTCCTCTGGCTTCTAGAAG-3'

UT6540-F TTCCTCTGGCTTCTAGAAG versus GATA144D04-F AGCCAGAAGGAGGAGGATTA

Matches = 9

Score = 7

AGCCAGANGNA

est. tm = 0.8 oC

DeltaG @37 degrees = -3.46 kcal/mole

5'-AGCCAGAAGGAGGAGGATTA-3'

|||||||x|x|

3'-GAAGATCTTCGGTCTCCTT-5'

GATA29A01-F CTGTGCCTCTATTGCCTCAT versus GATA73F01-F AATAGAAACACAGGAGATCTCTTT

Matches = 11

Score = 9

AATAGANNCACAG

est. tm = 15.5 oC

DeltaG @37 degrees = -4.29 kcal/mole

5'-AATAGAAACACAGGAGATCTCTTT-3'

||||||xx|||||

3'-TACTCCGTTATCTCCGTGTC-5'

GATA29A01-F CTGTGCCTCTATTGCCTCAT versus ATT070-R GGCAGTAGAGCCAGACCTTG

Matches = 12

Score = 8

GGCANTAGAGNCANAN

est. tm = 16.5 oC

DeltaG @37 degrees = -4.79 kcal/mole

5'-GGCAGTAGAGCCAGACCTTG-3'

||||x|||||x||x|x

3'-TACTCCGTTATCTCCGTGTC-5'

GGAT3H10-F GGATGGATGGACATAATGGA versus GATA11E09-R CATCCTTCCTGGTCCCTAGT

Matches = 8

Score = 7

CATCCNTCC

est. tm = 4.2 oC

DeltaG @37 degrees = -3.75 kcal/mole

5'-CATCCTTCCTGGTCCCTAGT-3'

|||||x|||

3'-AGGTAATACAGGTAGGTAGG-5'

GGAT3H10-F GGATGGATGGACATAATGGA versus GGAT3F08-R TATCCATCCATCCATCAACC

Matches = 8

Score = 7

NATCCATCC

est. tm = 17.0 oC

DeltaG @37 degrees = -5.59 kcal/mole

5'-TATCCATCCATCCATCAACC-3'

x||||||||

3'-AGGTAATACAGGTAGGTAGG-5'

GGAT3H10-F GGATGGATGGACATAATGGA versus GGAT3F08-R TATCCATCCATCCATCAACC

Matches = 12

Score = 11

TNTCCATCCATCC

est. tm = 31.7 oC

DeltaG @37 degrees = -8.04 kcal/mole

5'-TATCCATCCATCCATCAACC-3'

|x|||||||||||

3'-AGGTAATACAGGTAGGTAGG-5'

GATA64D02-F TATTTCAAAGGCAGCAAAGC versus GATA30G01-R AATGAGGTCTTACTTTGTTGCC

Matches = 9

Score = 7

GGCANCAAAGN

est. tm = 19.1 oC

DeltaG @37 degrees = -5.83 kcal/mole

3'-CCGTTGTTTCATTCTGGAGTAA-5'

||||x|||||x

5'-TATTTCAAAGGCAGCAAAGC-3'

GATA68H04-F ACAAGAACAGCATGGGGTAA versus GATA11C06N-F GATCCCAAGCTCTTCCTCTT

Matches = 13

Score = 7

NANCCCANGCTNTTCNTNT

est. tm = 0.3 oC

DeltaG @37 degrees = -2.19 kcal/mole

5'-GATCCCAAGCTCTTCCTCTT-3'

x|x||||x|||x|||x|x|

3'-AATGGGGTACGACAAGAACA-5'

GATA165G02N-F CAGGATTTTTCAGAAAGACA versus GATA63F09-F TTCACATGCATATGTCTTTATGG

Matches = 9

Score = 7

NCANAAAGACA

est. tm = 9.4 oC

DeltaG @37 degrees = -4.08 kcal/mole

3'-GGTATTTCTGTATACGTACACTT-5'

x||x|||||||

5'-CAGGATTTTTCAGAAAGACA-3'

GATA165G02N-F CAGGATTTTTCAGAAAGACA versus UT6540-R GCCATGTCTTCTTCAATAATG

Matches = 12

Score = 7

NATTNTTNANNAAGACA

est. tm = 1.3 oC

DeltaG @37 degrees = -1.62 kcal/mole

3'-GTAATAACTTCTTCTGTACCG-5'

x|||x||x|xx||||||

5'-CAGGATTTTTCAGAAAGACA-3'

GATA81B01-F ACACTGCAGGGTAAGACAGC versus GATA81B01-F ACACTGCAGGGTAAGACAGC

Matches = 10

Score = 8

ACNCTGCAGNGT

est. tm = 10.8 oC

DeltaG @37 degrees = -4.40 kcal/mole

5'-ACACTGCAGGGTAAGACAGC-3'

||x||||||x||

3'-CGACAGAATGGGACGTCACA-5'

AGC001b-F ATGCCTTATGGCACTGGACT versus GATA43C11-R TGGGTCTAGTCCAGTGGTGT

Matches = 10

Score = 7

ANNNCACTGGACT

est. tm = 14.2 oC

DeltaG @37 degrees = -4.63 kcal/mole

3'-TGTGGTGACCTGATCTGGGT-5'

|xxx|||||||||

5'-ATGCCTTATGGCACTGGACT-3'

GGAA3F06-F CAGAACAAACAAATGGGGAG versus GATA71C09-R TTGAATTGTTCTGGTACCTCTG

Matches = 10

Score = 7

TTNNNTTGTTCTG

est. tm = 8.6 oC

DeltaG @37 degrees = -3.16 kcal/mole

5'-TTGAATTGTTCTGGTACCTCTG-3'

||xxx||||||||

3'-GAGGGGTAAACAAACAAGAC-5'

GATA118G10-F ACATACGGATGAATGGATGG versus GATA129D11N-R TAGTACTCTACCATCCATCTATCCC

Matches = 12

Score = 9

NGGATNNATGGATGG

est. tm = 28.8 oC

DeltaG @37 degrees = -7.26 kcal/mole

3'-CCCTATCTACCTACCATCTCATGAT-5'

x||||xx||||||||

5'-ACATACGGATGAATGGATGG-3'

GATA118G10-F ACATACGGATGAATGGATGG versus GGAT3F08-R TATCCATCCATCCATCAACC

Matches = 10

Score = 7

GNTNNATGGATGG

est. tm = 3.7 oC

DeltaG @37 degrees = -2.84 kcal/mole

3'-CCAACTACCTACCTACCTAT-5'

|x|xx||||||||

5'-ACATACGGATGAATGGATGG-3'

GATA118G10-F ACATACGGATGAATGGATGG versus GGAT3F08-R TATCCATCCATCCATCAACC

Matches = 12

Score = 7

NNNNGATGNATGGATGG

est. tm = 22.4 oC

DeltaG @37 degrees = -5.53 kcal/mole

3'-CCAACTACCTACCTACCTAT-5'

xxxx||||x||||||||

5'-ACATACGGATGAATGGATGG-3'

GATA23F05-F ATGGTATTAGGAGATGGGGC versus ATA28C05-R CCATCCCCTAAACCTCTCAT

Matches = 12

Score = 7

CCATCNCCTAANNCNNT

est. tm = less than 0 oC

DeltaG @37 degrees = -1.42 kcal/mole

5'-CCATCCCCTAAACCTCTCAT-3'

|||||x|||||xx|xx|

3'-CGGGGTAGAGGATTATGGTA-5'

GATA43C11-F TTCAAGTGGTTGGGTTCACT versus GATA185H04N-F CCAACATCTAGAATTAATCAGAATC

Matches = 10

Score = 7

CCAACNNCTNGAA

est. tm = 1.6 oC

DeltaG @37 degrees = -2.52 kcal/mole

5'-CCAACATCTAGAATTAATCAGAATC-3'

|||||xx||x|||

3'-TCACTTGGGTTGGTGAACTT-5'

GATA43C11-F TTCAAGTGGTTGGGTTCACT versus GATA6D09-R TTATGAAGCAGTGATGCCAA

Matches = 9

Score = 7

TTGGNNTCACT

est. tm = 7.3 oC

DeltaG @37 degrees = -3.86 kcal/mole

3'-AACCGTAGTGACGAAGTATT-5'

||||xx|||||

5'-TTCAAGTGGTTGGGTTCACT-3'

AGAT125-R TGGCAAAGTCAGGCCATTAT versus GATA30D09N-F TCCAAGTAAAGGCCAGACTTCC

Matches = 12

Score = 7

NNAAGTCNGGCCNTTAN

est. tm = 23.8 oC

DeltaG @37 degrees = -6.18 kcal/mole

3'-CCTTCAGACCGGAAATGAACCT-5'

xx|||||x||||x|||x

5'-TGGCAAAGTCAGGCCATTAT-3'

ATT023-F CTGGCTGCAGTCTCGTCATA versus GATA131D09-R AGACTGCAGTGAGATGCCAT

Matches = 11

Score = 9

AGACTGCAGNNAG

est. tm = 25.5 oC

DeltaG @37 degrees = -6.61 kcal/mole

5'-AGACTGCAGTGAGATGCCAT-3'

|||||||||xx||

3'-ATACTGCTCTGACGTCGGTC-5'

ATT070-F CCTCATTGTCGAGGCAGAAT versus GATA30G01-R AATGAGGTCTTACTTTGTTGCC

Matches = 7

Score = 7

AATGAGG

est. tm = 3.0 oC

DeltaG @37 degrees = -3.81 kcal/mole

5'-AATGAGGTCTTACTTTGTTGCC-3'

|||||||

3'-TAAGACGGAGCTGTTACTCC-5'

ATT070-F CCTCATTGTCGAGGCAGAAT versus MFD466-TTA001-R GCCTGGGCAAAGAGAGAGTA

Matches = 11

Score = 7

GCCTNGNCAANGAGN

est. tm = 10.3 oC

DeltaG @37 degrees = -4.03 kcal/mole

5'-GCCTGGGCAAAGAGAGAGTA-3'

||||x|x|||x|||x

3'-TAAGACGGAGCTGTTACTCC-5'

GGAA20C10-F AGCAAACTTCATCCACTTGG versus ATA18A07-F AAGTCAGTTAGCTGAAGGTTGC

Matches = 13

Score = 7

GCAANCTTCANCNANNTGN

est. tm = 9.0 oC

DeltaG @37 degrees = -2.93 kcal/mole

3'-CGTTGGAAGTCGATTGACTGAA-5'

||||x|||||x|x|xx||x

5'-AGCAAACTTCATCCACTTGG-3'

GGAA20C10-F AGCAAACTTCATCCACTTGG versus GATA11C08-R GGCTGCAGTTAGCTGTCATT

Matches = 11

Score = 8

GGNTGNAGTTNGCT

est. tm = 6.6 oC

DeltaG @37 degrees = -3.43 kcal/mole

5'-GGCTGCAGTTAGCTGTCATT-3'

||x||x||||x|||

3'-GGTTCACCTACTTCAAACGA-5'

GGAA20C10-F AGCAAACTTCATCCACTTGG versus ATA25F04-R AGACCCAGTTGATGCAATGT

Matches = 12

Score = 7

ANANTNCATCNACTNGG

est. tm = less than zero

DeltaG @37 degrees = greater than zero

3'-TGTAACGTAGTTGACCCAGA-5'

|x|x|x||||x|||x||

5'-AGCAAACTTCATCCACTTGG-3'

GGAA8G07-F ATGCAAAGATGAACCAGGAA versus GATA30G01-F CATGGCCCTTCTTTTCATAG

Matches = 13

Score = 8

CNTGGNNCNTCTTTNCAT

est. tm = less than 0 oC

DeltaG @37 degrees = -1.19 kcal/mole

5'-CATGGCCCTTCTTTTCATAG-3'

|x|||xx|x|||||x|||

3'-AAGGACCAAGTAGAAACGTA-5'

GGAA8G07-F ATGCAAAGATGAACCAGGAA versus GATA11E09-R CATCCTTCCTGGTCCCTAGT

Matches = 11

Score = 7

ANNANGNACCAGGAA

est. tm = less than zero

DeltaG @37 degrees = -2.31 kcal/mole

3'-TGATCCCTGGTCCTTCCTAC-5'

|xx|x|x||||||||

5'-ATGCAAAGATGAACCAGGAA-3'

GGAA8G07-F ATGCAAAGATGAACCAGGAA versus GGAT3H10-R CACCTTTTCATCTGTCCACC

Matches = 9

Score = 7

CANCTTTNCAT

est. tm = less than 0 oC

DeltaG @37 degrees = -1.22 kcal/mole

5'-CACCTTTTCATCTGTCCACC-3'

||x||||x|||

3'-AAGGACCAAGTAGAAACGTA-5'

GATA6C01-F TCTAGGATGTTTTTAGAGAAAGGC versus GATA14E09-F TGAAAACATAGTACAATGAACATCC

Matches = 11

Score = 7

TNAAAACATNNTANA

est. tm = less than 0 oC

DeltaG @37 degrees = > 0 kcal/mole

5'-TGAAAACATAGTACAATGAACATCC-3'

|x|||||||xx||x|

3'-CGGAAAGAGATTTTTGTAGGATCT-5'

GATA14E09-F TGAAAACATAGTACAATGAACATCC versus ATA25F04-F TCATTAATCTAGCTTTTAAAAACAA

Matches = 13

Score = 7

TCATTNNNCTANNTTTTNA

est. tm = less than 0 oC

DeltaG @37 degrees = > 0 kcal/mole

5'-TCATTAATCTAGCTTTTAAAAACAA-3'

|||||xxx|||xx||||x|

3'-CCTACAAGTAACATGATACAAAAGT-5'

GATA6B02-F TAGATAGATGATGTTGTTGTTGATG versus ATA25F04-F TCATTAATCTAGCTTTTAAAAACAA

Matches = 9

Score = 7

TCATNNATCTA

est. tm = less than 0 oC

DeltaG @37 degrees = -1.76 kcal/mole

5'-TCATTAATCTAGCTTTTAAAAACAA-3'

||||xx|||||

3'-GTAGTTGTTGTTGTAGTAGATAGAT-5'

GGAA3A07Z-R CAACAAGAGCAAAAATCTGTCTC versus GATA6B02-F TAGATAGATGATGTTGTTGTTGATG

Matches = 13

Score = 7

NAGATNNNTGNTNTTGTTG

est. tm = 9.9 oC

DeltaG @37 degrees = -2.62 kcal/mole

5'-TAGATAGATGATGTTGTTGTTGATG-3'

x||||xxx||x|x||||||

3'-CTCTGTCTAAAAACGAGAACAAC-5'

UT721-F TTGGTCTCCTCTGATGGGT versus AGAT120-R TTGTCTGTCATCTATCTACCCATC

Matches = 7

Score = 7

GATGGGT

est. tm = 8.9 oC

DeltaG @37 degrees = -4.79 kcal/mole

3'-CTACCCATCTATCTACTGTCTGTT-5'

|||||||

5'-TTGGTCTCCTCTGATGGGT-3'

UT721-F TTGGTCTCCTCTGATGGGT versus GATA30F10-R TCTTATCTCCACCCACCAGA

Matches = 9

Score = 8

TCTGNTGGGT

est. tm = 15.0 oC

DeltaG @37 degrees = -5.36 kcal/mole

3'-AGACCACCCACCTCTATTCT-5'

||||x|||||

5'-TTGGTCTCCTCTGATGGGT-3'

AAAAC001-F CCCCGAAATTTACACCATCA versus GATA31D10-F GTGGGACCTTGTGATTGTGT

Matches = 8

Score = 7

ACACNATCA

est. tm = less than zero

DeltaG @37 degrees = -3.02 kcal/mole

3'-TGTGTTAGTGTTCCAGGGTG-5'

||||x||||

5'-CCCCGAAATTTACACCATCA-3'

GATA11C08-F TTTGGTAAGAAAAACATCTCCC versus GATA187D09N-F CTTAGTCTTTTCTTACCAAAACAGC

Matches = 14

Score = 8

NNNANNNTTTTCTTACCAAA

est. tm = 22.7 oC

DeltaG @37 degrees = -4.97 kcal/mole

5'-CTTAGTCTTTTCTTACCAAAACAGC-3'

xxx|xxx|||||||||||||

3'-CCCTCTACAAAAAGAATGGTTT-5'

AAT107-F GGTTGTGGTGAGCCAAGATT versus GATA187D09N-F CTTAGTCTTTTCTTACCAAAACAGC

Matches = 14

Score = 8

ANTCTTNNCTNACCANAACN

est. tm = 12.4 oC

DeltaG @37 degrees = -3.46 kcal/mole

5'-CTTAGTCTTTTCTTACCAAAACAGC-3'

|x||||xx||x||||x|||x

3'-TTAGAACCGAGTGGTGTTGG-5'

GATA187D09N-F CTTAGTCTTTTCTTACCAAAACAGC versus ATA82B02N-F TCCAGAGTTACTATTTTGGTAAAATG

Matches = 12

Score = 7

NNTNTTACCAAAANAGN

est. tm = 16.0 oC

DeltaG @37 degrees = -4.30 kcal/mole

3'-GTAAAATGGTTTTATCATTGAGACCT-5'

xx|x|||||||||x||x

5'-CTTAGTCTTTTCTTACCAAAACAGC-3'

GATA63A03N-R TATTTGGCAAGAATAGATACAGG versus GATA187D09N-F CTTAGTCTTTTCTTACCAAAACAGC

Matches = 15

Score = 8

CTNNNTCTNTTCTTNCCAAANN

est. tm = 19.6 oC

DeltaG @37 degrees = -4.28 kcal/mole

5'-CTTAGTCTTTTCTTACCAAAACAGC-3'

||xxx|||x|||||x|||||xx

3'-GGACATAGATAAGAACGGTTTAT-5'

AATA036-R ACTGACTGCAGCCTTGACCT versus ATA18A07-F AAGTCAGTTAGCTGAAGGTTGC

Matches = 10

Score = 7

GCANCCTTNANCT

est. tm = less than zero

DeltaG @37 degrees = -2.25 kcal/mole

3'-CGTTGGAAGTCGATTGACTGAA-5'

|||x||||x|x||

5'-ACTGACTGCAGCCTTGACCT-3'

GACAG001-F CGAGATTGCACCACTGTACC versus GATA43C11-R TGGGTCTAGTCCAGTGGTGT

Matches = 10

Score = 7

NCACCACTGNACN

est. tm = 28.0 oC

DeltaG @37 degrees = -7.39 kcal/mole

3'-TGTGGTGACCTGATCTGGGT-5'

x||||||||x||x

5'-CGAGATTGCACCACTGTACC-3'

GATA64D03-F ACATTTCCAAGGGCTACACA versus ATCC001-F TGCCCTGTATTCTGTGTAGCA

Matches = 8

Score = 7

NGCTACACA

est. tm = 19.3 oC

DeltaG @37 degrees = -5.98 kcal/mole

3'-ACGATGTGTCTTATGTCCCGT-5'

x||||||||

5'-ACATTTCCAAGGGCTACACA-3'

GATA73E11-F TTGGTGGTGTCATCCTCTTT versus GATA28D11-F AAAGAAGATGAAATTGCCATG

Matches = 14

Score = 8

AAAGANGATGANANNNCCAN

est. tm = 17.4 oC

DeltaG @37 degrees = -4.22 kcal/mole

5'-AAAGAAGATGAAATTGCCATG-3'

|||||x|||||x|xxx|||x

3'-TTTCTCCTACTGTGGTGGTT-5'

GATA73E11-F TTGGTGGTGTCATCCTCTTT versus GATA7D12-R ACCTAAATGTTCATCAAAAGAGG

Matches = 7

Score = 7

CCTCTTT

est. tm = 2.9 oC

DeltaG @37 degrees = -3.78 kcal/mole

3'-GGAGAAAACTACTTGTAAATCCA-5'

|||||||

5'-TTGGTGGTGTCATCCTCTTT-3'

ATA21A03-F TGCTTACCATAATCAACATTGA versus GATA11C08-F TTTGGTAAGAAAAACATCTCCC

Matches = 9

Score = 7

TNTGGTAAGNA

est. tm = less than 0 oC

DeltaG @37 degrees = -1.68 kcal/mole

5'-TTTGGTAAGAAAAACATCTCCC-3'

|x|||||||x|

3'-AGTTACAACTAATACCATTCGT-5'

GATA25A04-R GTGCATTATGGGGACCATTA versus ATA21A03-F TGCTTACCATAATCAACATTGA

Matches = 12

Score = 7

TGNTNNCCATAATNNAC

est. tm = less than 0 oC

DeltaG @37 degrees = -0.77 kcal/mole

5'-TGCTTACCATAATCAACATTGA-3'

||x|xx|||||||xx||

3'-ATTACCAGGGGTATTACGTG-5'

GATA121A08N-F GTTAACAGACTATTACCTGCCTACC versus GATA121A08N-F GTTAACAGACTATTACCTGCCTACC

Matches = 12

Score = 7

GNTAANAGNCTNTTANC

est. tm = less than 0 oC

DeltaG @37 degrees = > 0 kcal/mole

5'-GTTAACAGACTATTACCTGCCTACC-3'

|x|||x||x||x|||x|

3'-CCATCCGTCCATTATCAGACAATTG-5'

GGAA2F11N-F AAGATACACAGGAAGAAAGAAAGG versus GATA176C01-R CTCTATCTCTATCTCTGTCTCTGCC

Matches = 15

Score = 7

CTNTNTNTCTNNCTNTGTNTCTN

est. tm = less than 0 oC

DeltaG @37 degrees = -0.45 kcal/mole

5'-CTCTATCTCTATCTCTGTCTCTGCC-3'

||x|x|x|||xx||x|||x|||x

3'-GGAAAGAAAGAAGGACACATAGAA-5'

GGAA2F11N-F AAGATACACAGGAAGAAAGAAAGG versus GGAA20C10-R TTCCTGTCCTCTAATGTAACTTACC

Matches = 15

Score = 8

TTNCTNTCNTCNNNTGTANCTT

est. tm = less than 0 oC

DeltaG @37 degrees = > 0 kcal/mole

5'-TTCCTGTCCTCTAATGTAACTTACC-3'

||x||x||x||xxx||||x|||

3'-GGAAAGAAAGAAGGACACATAGAA-5'

GATA29F06Z-R ACACCTGCCTTTCTTTCCTG versus GGAA2F11N-F AAGATACACAGGAAGAAAGAAAGG

Matches = 11

Score = 9

CCTTTCTTTCNTN

est. tm = 23.2 oC

DeltaG @37 degrees = -6.06 kcal/mole

3'-GGAAAGAAAGAAGGACACATAGAA-5'

||||||||||x|x

5'-ACACCTGCCTTTCTTTCCTG-3'

ATA22D02-F CCACCTTTCAACTGTCCATT versus ATA55A11N-R CAGAAAATGGAGGGTAGCAA

Matches = 11

Score = 7

TTNCNACNNTCCATT

est. tm = less than zero

DeltaG @37 degrees = -1.08 kcal/mole

3'-AACGATGGGAGGTAAAAGAC-5'

||x|x||xx||||||

5'-CCACCTTTCAACTGTCCATT-3'

ATA12D05-R CACCTCAGCCTCTTTGGTAG versus ATGT006Z-F AAGGCTGAGGTAGGCTTATTTTT

Matches = 10

Score = 8

NAGGCTGAGGTN

est. tm = 40.5 oC

DeltaG @37 degrees = -10.20 kcal/mole

5'-AAGGCTGAGGTAGGCTTATTTTT-3'

x||||||||||x

3'-GATGGTTTCTCCGACTCCAC-5'

ATA33B03Z-F CCTGATCTGGAATGAACTCA versus GATA72G09N-R TTGGTGATTTAATTCCAGGC

Matches = 12

Score = 8

NNCTGGAATNAANTCA

est. tm = 16.1 oC

DeltaG @37 degrees = -4.44 kcal/mole

3'-CGGACCTTAATTTAGTGGTT-5'

xx|||||||x||x|||

5'-CCTGATCTGGAATGAACTCA-3'

GATA48E02-F AATTCCTTTACTCCAGAAAGG versus GATA52A04-R TTTGGGATAAAAGGTATTTTGC

Matches = 13

Score = 8

TTNNGGANNAAAGGNATT

est. tm = 5.3 oC

DeltaG @37 degrees = -2.07 kcal/mole

5'-TTTGGGATAAAAGGTATTTTGC-3'

||xx|||xx|||||x|||

3'-GGAAAGACCTCATTTCCTTAA-5'

GATA84C01-R TGGAGTGGACCAATTCCTTA versus GATA48E02-F AATTCCTTTACTCCAGAAAGG

Matches = 11

Score = 7

AATTNNTNNACTCCA

est. tm = 3.4 oC

DeltaG @37 degrees = -2.37 kcal/mole

5'-AATTCCTTTACTCCAGAAAGG-3'

||||xx|xx||||||

3'-ATTCCTTAACCAGGTGAGGT-5'

GATA89G08Z-R AAGCATGTGAAAGGCATTGT versus GATA63F09-F TTCACATGCATATGTCTTTATGG

Matches = 10

Score = 9

TTCACATGCNT

est. tm = 19.7 oC

DeltaG @37 degrees = -5.71 kcal/mole

5'-TTCACATGCATATGTCTTTATGG-3'

|||||||||x|

3'-TGTTACGGAAAGTGTACGAA-5'

GATA187D09N-R CCACAAATACATTTCCCTGA versus GATA63F09-F TTCACATGCATATGTCTTTATGG

Matches = 14

Score = 8

CCANAAANACATNTNCNTGN

est. tm = 4.3 oC

DeltaG @37 degrees = -1.97 kcal/mole

3'-GGTATTTCTGTATACGTACACTT-5'

|||x|||x||||x|x|x||x

5'-CCACAAATACATTTCCCTGA-3'

GGAA5C04Z-F GAGCTTAAGGAGGCCAAGGT versus TAGA006-R TTCTCAGCCTCCATAACCTCA

Matches = 14

Score = 8

NNCTNNGCCTCCNTAANCTC

est. tm = 20.6 oC

DeltaG @37 degrees = -4.99 kcal/mole

5'-TTCTCAGCCTCCATAACCTCA-3'

xx||xx||||||x|||x|||

3'-TGGAACCGGAGGAATTCGAG-5'

ATA27C11-F GTTAATGGGTGCAGCGCC versus AAT243-R TCACCCATTAATTCTTTGATTTGA

Matches = 10

Score = 8

NCACCCATTAAN

est. tm = 30.1 oC

DeltaG @37 degrees = -7.75 kcal/mole

5'-TCACCCATTAATTCTTTGATTTGA-3'

x||||||||||x

3'-CCGCGACGTGGGTAATTG-5'

ATA27C11-F GTTAATGGGTGCAGCGCC versus GATA134B03-R GCTGCTTCCCTAAACCTAGA

Matches = 11

Score = 7

GCTGCNNCCNTNAAC

est. tm = 9.8 oC

DeltaG @37 degrees = -3.75 kcal/mole

5'-GCTGCTTCCCTAAACCTAGA-3'

|||||xx||x|x|||

3'-CCGCGACGTGGGTAATTG-5'

GATA49D12N-F GCTTGCAGACAGCCTATTGT versus GATA188F04-F AACAGAACCAATAGGCTATCTATC

Matches = 12

Score = 7

NNNAGANAGCCTATTGN

est. tm = 27.2 oC

DeltaG @37 degrees = -6.79 kcal/mole

3'-CTATCTATCGGATAACCAAGACAA-5'

xxx|||x|||||||||x

5'-GCTTGCAGACAGCCTATTGT-3'

GATA91H06-F ACACAGATGTGCATCTATCTCG versus GATA91H06-F ACACAGATGTGCATCTATCTCG

Matches = 14

Score = 8

ANANAGATGNNCATCTNTNT

est. tm = less than 0 oC

DeltaG @37 degrees = > 0 kcal/mole

5'-ACACAGATGTGCATCTATCTCG-3'

|x|x|||||xx|||||x|x|

3'-GCTCTATCTACGTGTAGACACA-5'

GATA63D12-F ACTACTCCAAGGTTCCAGCC versus ATA7D07-R ACGGGAGCTTTTGAGAAGTT

Matches = 13

Score = 7

NCNGGANCNTTNGAGNAGT

est. tm = less than 0 oC

DeltaG @37 degrees = -0.72 kcal/mole

5'-ACGGGAGCTTTTGAGAAGTT-3'

x|x|||x|x||x|||x|||

3'-CCGACCTTGGAACCTCATCA-5'

GATA63D12-F ACTACTCCAAGGTTCCAGCC versus AGAT144-R ATCCCAGATGGAAACATGGA

Matches = 11

Score = 7

TCCANGNTTCCANCN

est. tm = 7.8 oC

DeltaG @37 degrees = -3.77 kcal/mole

3'-AGGTACAAAGGTAGACCCTA-5'

||||x|x|||||x|x

5'-ACTACTCCAAGGTTCCAGCC-3'

GATA4H01-F AAACCTCTCTTTGATTGGGG versus ATT023-R CCACAGAGAGGTTGGAGGAG

Matches = 11

Score = 8

NCANAGAGAGGTTN

est. tm = 29.2 oC

DeltaG @37 degrees = -7.51 kcal/mole

5'-CCACAGAGAGGTTGGAGGAG-3'

x||x|||||||||x

3'-GGGGTTAGTTTCTCTCCAAA-5'

GATA90G11-F ACTGTGGGGTGTCACACTTT versus ATA29A06N-F AGGCAACATAGTGAGACCCCA

Matches = 12

Score = 8

TGGGGTNTCACNNTNT

est. tm = 13.5 oC

DeltaG @37 degrees = -4.46 kcal/mole

3'-ACCCCAGAGTGATACAACGGA-5'

||||||x||||xx|x|

5'-ACTGTGGGGTGTCACACTTT-3'

ATA29A06N-F AGGCAACATAGTGAGACCCCA versus GATA30G01-R AATGAGGTCTTACTTTGTTGCC

Matches = 17

Score = 14

GGCAACANAGTNAGACCNCA

est. tm = 41.0 oC

DeltaG @37 degrees = -10.70 kcal/mole

3'-CCGTTGTTTCATTCTGGAGTAA-5'

|||||||x|||x|||||x||

5'-AGGCAACATAGTGAGACCCCA-3'

GATA23C03N-F ATCAGGATTCCAGGAGGAAA versus GGAA8G07-R CCCTGGACTCATGGTACTTG

Matches = 11

Score = 7

NCCTGGANTCNTGNT

est. tm = 6.9 oC

DeltaG @37 degrees = -3.64 kcal/mole

5'-CCCTGGACTCATGGTACTTG-3'

x||||||x||x||x|

3'-AAAGGAGGACCTTAGGACTA-5'

GATA11C08-F TTTGGTAAGAAAAACATCTCCC versus GATA73F01-F AATAGAAACACAGGAGATCTCTTT

Matches = 10

Score = 7

AAANANATCTCCN

est. tm = 4.0 oC

DeltaG @37 degrees = -3.16 kcal/mole

3'-TTTCTCTAGAGGACACAAAGATAA-5'

|||x|x||||||x

5'-TTTGGTAAGAAAAACATCTCCC-3'

GATA7G10-F ACAGAAGTCTGGGATGTGGA versus GATA48E02-R CAGATTTCTGCTTTCCCAGA

Matches = 9

Score = 7

CAGANTTCTGN

est. tm = 13.2 oC

DeltaG @37 degrees = -4.67 kcal/mole

5'-CAGATTTCTGCTTTCCCAGA-3'

||||x|||||x

3'-AGGTGTAGGGTCTGAAGACA-5'

GATA7G10-F ACAGAAGTCTGGGATGTGGA versus GATA6B09-R ACATCTGAGACTTGTAGTAGAAGGC

Matches = 12

Score = 7

ACATCNNAGACTTNTNN

est. tm = 14.6 oC

DeltaG @37 degrees = -4.04 kcal/mole

5'-ACATCTGAGACTTGTAGTAGAAGGC-3'

|||||xx||||||x|xx

3'-AGGTGTAGGGTCTGAAGACA-5'

GATA7G10-F ACAGAAGTCTGGGATGTGGA versus GATA30F10-R TCTTATCTCCACCCACCAGA

Matches = 10

Score = 7

TCTGGNNNGTGGA

est. tm = 16.0 oC

DeltaG @37 degrees = -5.03 kcal/mole

3'-AGACCACCCACCTCTATTCT-5'

|||||xxx|||||

5'-ACAGAAGTCTGGGATGTGGA-3'

GATA6E05-R GTTCTTCAGGGAAACAGAACC versus ATA26D07-F AGAGTGAGATTCTGTCTCAATTAA

Matches = 12

Score = 7

TTNANNGANACAGAANC

est. tm = less than zero

DeltaG @37 degrees = -0.08 kcal/mole

3'-AATTAACTCTGTCTTAGAGTGAGA-5'

||x|xx||x||||||x|

5'-GTTCTTCAGGGAAACAGAACC-3'

GGAA22G01-F ACAAAAGCTGGCAAAGACAG versus sRA-R CCTTGTCAGCGTTTATTTGCC

Matches = 12

Score = 8

CNTTGNCAGCNTTTNT

est. tm = less than 0 oC

DeltaG @37 degrees = -1.38 kcal/mole

5'-CCTTGTCAGCGTTTATTTGCC-3'

|x|||x||||x|||x|

3'-GACAGAAACGGTCGAAAACA-5'

GGAA22G01-F ACAAAAGCTGGCAAAGACAG versus GATA176C01-R CTCTATCTCTATCTCTGTCTCTGCC

Matches = 10

Score = 9

GGCANAGACAG

est. tm = 25.8 oC

DeltaG @37 degrees = -6.89 kcal/mole

3'-CCGTCTCTGTCTCTATCTCTATCTC-5'

||||x||||||

5'-ACAAAAGCTGGCAAAGACAG-3'

GGAA22G01-F ACAAAAGCTGGCAAAGACAG versus GATA11C06N-R AGCGTTTGTGTGTGCATCTGT

Matches = 8

Score = 7

AGCNTTTGT

est. tm = 1.3 oC

DeltaG @37 degrees = -3.47 kcal/mole

5'-AGCGTTTGTGTGTGCATCTGT-3'

|||x|||||

3'-GACAGAAACGGTCGAAAACA-5'

GATA90G11-F ACTGTGGGGTGTCACACTTT versus AGAT120-F CTGGGCAACAAAGTGAGACC

Matches = 9

Score = 7

NGTCNCACTTT

est. tm = 9.3 oC

DeltaG @37 degrees = -4.07 kcal/mole

3'-CCAGAGTGAAACAACGGGTC-5'

x|||x||||||

5'-ACTGTGGGGTGTCACACTTT-3'

GATA2F11-R AAGCAAAGAGGATTGAAAGTG versus ATA19H08-F TTCCAGAGTATTTGCTTAAGAGG

Matches = 12

Score = 7

TTCNANNNTNTTTGCTT

est. tm = 0.7 oC

DeltaG @37 degrees = -1.51 kcal/mole

5'-TTCCAGAGTATTTGCTTAAGAGG-3'

|||x|xxx|x|||||||

3'-GTGAAAGTTAGGAGAAACGAA-5'

GATA63F09-R CTGTCTAGTGTCCTGAGCTGC versus GATA169E06-F ACAGTTCCCAAGACTAAACAGC

Matches = 14

Score = 7

NCAGNTCNNNANACTANACAG

est. tm = 7.0 oC

DeltaG @37 degrees = -1.92 kcal/mole

5'-ACAGTTCCCAAGACTAAACAGC-3'

x|||x||xxx|x||||x||||

3'-CGTCGAGTCCTGTGATCTGTC-5'

GGAA21G11-F TTTTAGGTGGCCACCATCTA versus GGAA21G11-F TTTTAGGTGGCCACCATCTA

Matches = 12

Score = 7

TAGNTGGNNNCCANCTA

est. tm = less than zero

DeltaG @37 degrees = -1.50 kcal/mole

3'-ATCTACCACCGGTGGATTTT-5'

|||x|||xxx|||x|||

5'-TTTTAGGTGGCCACCATCTA-3'

GGAA21G11-F TTTTAGGTGGCCACCATCTA versus GATA8C04-F AGACCCTGTCTCAGATAGATGG

Matches = 7

Score = 7

CCATCTA

est. tm = 0.3 oC

DeltaG @37 degrees = -3.39 kcal/mole

3'-GGTAGATAGACTCTGTCCCAGA-5'

|||||||

5'-TTTTAGGTGGCCACCATCTA-3'

GGAA21G11-F TTTTAGGTGGCCACCATCTA versus AAAT007-F GCCAACATGGTGAAAACCTAA

Matches = 13

Score = 8

TTAGGTNNNCACCATNTN

est. tm = 22.2 oC

DeltaG @37 degrees = -5.56 kcal/mole

3'-AATCCAAAAGTGGTACAACCG-5'

||||||xxx||||||x|x

5'-TTTTAGGTGGCCACCATCTA-3'

GGAA21G11-F TTTTAGGTGGCCACCATCTA versus GATA45B10N-F GTGGTGAACACCAATAAATGG

Matches = 12

Score = 7

NTGGTGNNCACCNANAA

est. tm = 12.9 oC

DeltaG @37 degrees = -4.14 kcal/mole

5'-GTGGTGAACACCAATAAATGG-3'

x|||||xx||||x|x||

3'-ATCTACCACCGGTGGATTTT-5'

ATA4E02-R CTGCTTTGGGTTTCACTTGT versus ATGG002-F GCTCAATTCACAGAAGAGAAACC

Matches = 10

Score = 8

GGTTTCNCTTNT

est. tm = 2.5 oC

DeltaG @37 degrees = -2.75 kcal/mole

3'-CCAAAGAGAAGACACTTAACTCG-5'

||||||x|||x|

5'-CTGCTTTGGGTTTCACTTGT-3'

GATA31A10-R ACATGTGTCCATCAAATGATG versus GATA63A03N-F GTGGATAGACACATGACAGATAGG

Matches = 12

Score = 8

NTNGATNGACACATGN

est. tm = 23.0 oC

DeltaG @37 degrees = -5.96 kcal/mole

5'-GTGGATAGACACATGACAGATAGG-3'

x|x|||x||||||||x

3'-GTAGTAAACTACCTGTGTACA-5'

GATA29F06Z-R ACACCTGCCTTTCTTTCCTG versus GATA63A03N-F GTGGATAGACACATGACAGATAGG

Matches = 10

Score = 7

CCTNTCTNTCNTG

est. tm = less than zero

DeltaG @37 degrees = -1.70 kcal/mole

3'-GGATAGACAGTACACAGATAGGTG-5'

|||x|||x||x||

5'-ACACCTGCCTTTCTTTCCTG-3'

GATA63A03N-F GTGGATAGACACATGACAGATAGG versus AGAT120-R TTGTCTGTCATCTATCTACCCATC

Matches = 17

Score = 11

NTNTCTGTCATNTNTCTANCCAN

est. tm = 30.0 oC

DeltaG @37 degrees = -7.17 kcal/mole

5'-TTGTCTGTCATCTATCTACCCATC-3'

x|x||||||||x|x||||x|||x

3'-GGATAGACAGTACACAGATAGGTG-5'

GATA73F01-F AATAGAAACACAGGAGATCTCTTT versus ATA82B02N-F TCCAGAGTTACTATTTTGGTAAAATG

Matches = 12

Score = 9

TCCNGNGTTNCTATT

est. tm = 1.0 oC

DeltaG @37 degrees = -1.90 kcal/mole

5'-TCCAGAGTTACTATTTTGGTAAAATG-3'

|||x|x|||x|||||

3'-TTTCTCTAGAGGACACAAAGATAA-5'

GATA27A03-F CAGTTACCCAGGAAGCTGAA versus GGAA2A03-F CCTGGGCAACAGAATAAGAT

Matches = 10

Score = 8

CCTGGGNAACNG

est. tm = 12.4 oC

DeltaG @37 degrees = -4.58 kcal/mole

5'-CCTGGGCAACAGAATAAGAT-3'

||||||x|||x|

3'-AAGTCGAAGGACCCATTGAC-5'

GATA27A03-F CAGTTACCCAGGAAGCTGAA versus ATA12D05-R CACCTCAGCCTCTTTGGTAG

Matches = 12

Score = 7

NTACCNANGANGCTGAN

est. tm = 17.7 oC

DeltaG @37 degrees = -5.10 kcal/mole

3'-GATGGTTTCTCCGACTCCAC-5'

x||||x|x||x|||||x

5'-CAGTTACCCAGGAAGCTGAA-3'

TTAT023z-F TGTTGGGCTTCACCATACCT versus GATA45B10N-F GTGGTGAACACCAATAAATGG

Matches = 12

Score = 8

NTGGTGAANNCCAANA

est. tm = 21.6 oC

DeltaG @37 degrees = -5.70 kcal/mole

5'-GTGGTGAACACCAATAAATGG-3'

x|||||||xx||||x|

3'-TCCATACCACTTCGGGTTGT-5'

TTAT023z-F TGTTGGGCTTCACCATACCT versus ATA19H08-R GCATTGTGGGATGAGGTATG

Matches = 7

Score = 7

CATACCT

est. tm = 1.2 oC

DeltaG @37 degrees = -3.53 kcal/mole

3'-GTATGGAGTAGGGTGTTACG-5'

|||||||

5'-TGTTGGGCTTCACCATACCT-3'

GATA71H05-F GAGCCTGAGCAGTAGTCAGC versus TAGA006-R TTCTCAGCCTCCATAACCTCA

Matches = 9

Score = 7

TNCTCAGNCTC

est. tm = less than 0 oC

DeltaG @37 degrees = -2.06 kcal/mole

5'-TTCTCAGCCTCCATAACCTCA-3'

|x|||||x|||

3'-CGACTGATGACGAGTCCGAG-5'

ATA55A11N-F AGAAGAATCACTTGGACCCA versus GATA31D10-F GTGGGACCTTGTGATTGTGT

Matches = 13

Score = 7

NNANAATCACNNGGNCCCA

est. tm = 15.4 oC

DeltaG @37 degrees = -4.28 kcal/mole

3'-TGTGTTAGTGTTCCAGGGTG-5'

xx|x||||||xx||x||||

5'-AGAAGAATCACTTGGACCCA-3'

GATA11C06N-F GATCCCAAGCTCTTCCTCTT versus ATA45G06-F GGTGACAGAGCAAGACCTTG

Matches = 12

Score = 9

CAAGNTCTTNCTCTN

est. tm = 20.1 oC

DeltaG @37 degrees = -5.28 kcal/mole

3'-GTTCCAGAACGAGACAGTGG-5'

||||x||||x||||x

5'-GATCCCAAGCTCTTCCTCTT-3'

GATA11C06N-F GATCCCAAGCTCTTCCTCTT versus GATA6G12-R GAAGACCTACGGATTGGGTC

Matches = 11

Score = 7

GAAGANCTNNGGATN

est. tm = 11.6 oC

DeltaG @37 degrees = -3.84 kcal/mole

5'-GAAGACCTACGGATTGGGTC-3'

|||||x||xx||||x

3'-TTCTCCTTCTCGAACCCTAG-5'

GATA11C06N-F GATCCCAAGCTCTTCCTCTT versus AGC001b-R TGTGAGTGGAAGAGCTGTGG

Matches = 13

Score = 9

CCNNAGCTCTTCCNCTN

est. tm = 30.8 oC

DeltaG @37 degrees = -7.73 kcal/mole

3'-GGTGTCGAGAAGGTGAGTGT-5'

||xx|||||||||x||x

5'-GATCCCAAGCTCTTCCTCTT-3'

GATA11C06N-F GATCCCAAGCTCTTCCTCTT versus ATT070-R GGCAGTAGAGCCAGACCTTG

Matches = 11

Score = 7

CAAGNTCTNNCTCTN

est. tm = 12.0 oC

DeltaG @37 degrees = -3.86 kcal/mole

3'-GTTCCAGACCGAGATGACGG-5'

||||x|||xx||||x

5'-GATCCCAAGCTCTTCCTCTT-3'

GGAA20G04-R TTCACAAGGTTCCACAAGGT versus GTAT1A05-F TGTGAAACTTTGTCATCACTATACC

Matches = 12

Score = 8

TGTGNAACNTTGTNAN

est. tm = 12.8 oC

DeltaG @37 degrees = -4.04 kcal/mole

5'-TGTGAAACTTTGTCATCACTATACC-3'

||||x|||x||||x|x

3'-TGGAACACCTTGGAACACTT-5'

GATA8C04-F AGACCCTGTCTCAGATAGATGG versus GATA188F04-F AACAGAACCAATAGGCTATCTATC

Matches = 8

Score = 7

GATAGATNG

est. tm = less than zero

DeltaG @37 degrees = -1.39 kcal/mole

3'-CTATCTATCGGATAACCAAGACAA-5'

|||||||x|

5'-AGACCCTGTCTCAGATAGATGG-3'

GATA8C04-F AGACCCTGTCTCAGATAGATGG versus GATA165B12-F TATGTATCATCAATCATCTATCCG

Matches = 9

Score = 7

CNGATAGATGN

est. tm = 5.3 oC

DeltaG @37 degrees = -3.25 kcal/mole

3'-GCCTATCTACTAACTACTATGTAT-5'

|x||||||||x

5'-AGACCCTGTCTCAGATAGATGG-3'

GATA8C04-F AGACCCTGTCTCAGATAGATGG versus GATA81B01-R AAGACAGTGTCTAAGCTGTCACA

Matches = 10

Score = 8

NAGACAGNGTCT

est. tm = 19.5 oC

DeltaG @37 degrees = -5.65 kcal/mole

5'-AAGACAGTGTCTAAGCTGTCACA-3'

x||||||x||||

3'-GGTAGATAGACTCTGTCCCAGA-5'

GATA8C04-F AGACCCTGTCTCAGATAGATGG versus GATA129D11N-R TAGTACTCTACCATCCATCTATCCC

Matches = 9

Score = 7

NNGATAGATGG

est. tm = 15.0 oC

DeltaG @37 degrees = -4.68 kcal/mole

3'-CCCTATCTACCTACCATCTCATGAT-5'

xx|||||||||

5'-AGACCCTGTCTCAGATAGATGG-3'

GATA21F03-R CCTGCCTGCCTATCTATCTG versus GATA8C04-F AGACCCTGTCTCAGATAGATGG

Matches = 10

Score = 9

CNATCTATCTG

est. tm = 10.3 oC

DeltaG @37 degrees = -3.57 kcal/mole

3'-GGTAGATAGACTCTGTCCCAGA-5'

|x|||||||||

5'-CCTGCCTGCCTATCTATCTG-3'

UT1772-R GGGTGCTAGGTGTGCTCA versus GATA25A04-F TAGCACTTGAGCACACATGG

Matches = 11

Score = 9

CNANGTGTGCTCA

est. tm = 20.3 oC

DeltaG @37 degrees = -5.66 kcal/mole

3'-GGTACACACGAGTTCACGAT-5'

|x|x|||||||||

5'-GGGTGCTAGGTGTGCTCA-3'

GATA49C09N-F GCAACAGAGCAAGACTGTC versus GATA30G01-R AATGAGGTCTTACTTTGTTGCC

Matches = 13

Score = 7

NNNNGTCTTNCTNTGTTGC

est. tm = 22.0 oC

DeltaG @37 degrees = -5.26 kcal/mole

5'-AATGAGGTCTTACTTTGTTGCC-3'

xxxx|||||x||x||||||

3'-CTGTCAGAACGAGACAACG-5'

GATA28D11-F AAAGAAGATGAAATTGCCATG versus UT6540-R GCCATGTCTTCTTCAATAATG

Matches = 12

Score = 7

GCNATNTCNTCTTCNNT

est. tm = less than 0 oC

DeltaG @37 degrees = -0.57 kcal/mole

5'-GCCATGTCTTCTTCAATAATG-3'

||x||x||x|||||xx|

3'-GTACCGTTAAAGTAGAAGAAA-5'

AAT095-F TTGGGATGGTGAAAAGGTTC versus GGAT3H10-R CACCTTTTCATCTGTCCACC

Matches = 13

Score = 7

NACCTTTTCANCNNNCCAN

est. tm = 25.5 oC

DeltaG @37 degrees = -6.33 kcal/mole

5'-CACCTTTTCATCTGTCCACC-3'

x|||||||||x|xxx|||x

3'-CTTGGAAAAGTGGTAGGGTT-5'

ATA45G06-F GGTGACAGAGCAAGACCTTG versus GATA30G01-R AATGAGGTCTTACTTTGTTGCC

Matches = 14

Score = 8

GGNNACANAGNAAGACCTNN

est. tm = 22.9 oC

DeltaG @37 degrees = -5.62 kcal/mole

3'-CCGTTGTTTCATTCTGGAGTAA-5'

||xx|||x||x|||||||xx

5'-GGTGACAGAGCAAGACCTTG-3'

GATA70B08-R GTCCCAAAGGACCTGCTC versus ATA45G06-F GGTGACAGAGCAAGACCTTG

Matches = 10

Score = 7

NAAGGNCNTGCTC

est. tm = 12.9 oC

DeltaG @37 degrees = -4.60 kcal/mole

3'-GTTCCAGAACGAGACAGTGG-5'

x||||x|x|||||

5'-GTCCCAAAGGACCTGCTC-3'

GATA64H04-F GATGATAGAGATGGCACATGA versus GATA165B12-F TATGTATCATCAATCATCTATCCG

Matches = 9

Score = 7

TNTNTATCATC

est. tm = less than 0 oC

DeltaG @37 degrees = -0.54 kcal/mole

5'-TATGTATCATCAATCATCTATCCG-3'

|x|x|||||||

3'-AGTACACGGTAGAGATAGTAG-5'

GATA64H04-F GATGATAGAGATGGCACATGA versus GATA30F10-F CCAACTCTCATCTGTATTATCTATG

Matches = 14

Score = 7

NCANNTNNCATCTNTATNATC

est. tm = 0.3 oC

DeltaG @37 degrees = -0.37 kcal/mole

5'-CCAACTCTCATCTGTATTATCTATG-3'

x||xx|xx|||||x|||x|||

3'-AGTACACGGTAGAGATAGTAG-5'

GATA43A04-R CCTGGATGACAGAGTGCTCT versus GATA6D09-F CTGTCCTCTAGGCTCATTTAGC

Matches = 10

Score = 8

CTGTCNTCNAGG

est. tm = 9.0 oC

DeltaG @37 degrees = -3.83 kcal/mole

5'-CTGTCCTCTAGGCTCATTTAGC-3'

|||||x||x|||

3'-TCTCGTGAGACAGTAGGTCC-5'

GTTTT001-R AGCCTGGGTGACAGAGTGAA versus GATA6D09-F CTGTCCTCTAGGCTCATTTAGC

Matches = 11

Score = 8

CTGTCNNCNAGGCT

est. tm = 16.9 oC

DeltaG @37 degrees = -5.01 kcal/mole

5'-CTGTCCTCTAGGCTCATTTAGC-3'

|||||xx|x|||||

3'-AAGTGAGACAGTGGGTCCGA-5'

GATA44F10-F TTCCAGCCTAGGTAGCAGTG versus GATA28F03-R CTACACCATCAGTACTCACTAGGC

Matches = 11

Score = 7

GCCTAGNNAGNANTG

est. tm = 1.4 oC

DeltaG @37 degrees = -2.22 kcal/mole

3'-CGGATCACTCATGACTACCACATC-5'

||||||xx||x|x||

5'-TTCCAGCCTAGGTAGCAGTG-3'

GATA44F10-F TTCCAGCCTAGGTAGCAGTG versus ATA29A06N-R ACCACACACAGCTACTTTTGC

Matches = 11

Score = 7

GCNNANGTAGCNGTG

est. tm = 6.2 oC

DeltaG @37 degrees = -2.95 kcal/mole

3'-CGTTTTCATCGACACACACCA-5'

||xx|x|||||x|||

5'-TTCCAGCCTAGGTAGCAGTG-3'

GATA23B01N-F GTGTAAGCAGTGTGCAGTGG versus GATA22F11NZ-R TCTCTCTTGCTCCACTGCAA

Matches = 8

Score = 7

NTGCAGTGG

est. tm = 26.4 oC

DeltaG @37 degrees = -7.28 kcal/mole

3'-AACGTCACCTCGTTCTCTCT-5'

x||||||||

5'-GTGTAAGCAGTGTGCAGTGG-3'

GATA23B01N-F GTGTAAGCAGTGTGCAGTGG versus GATA151F03N-R AAGGACTCACATGCACACTGC

Matches = 11

Score = 8

GCAGTGTGCANNNG

est. tm = 29.3 oC

DeltaG @37 degrees = -7.42 kcal/mole

3'-CGTCACACGTACACTCAGGAA-5'

||||||||||xxx|

5'-GTGTAAGCAGTGTGCAGTGG-3'

GGAA2A03-F CCTGGGCAACAGAATAAGAT versus GATA30G01-R AATGAGGTCTTACTTTGTTGCC

Matches = 13

Score = 10

GGCAACANANTAAGAN

est. tm = 29.6 oC

DeltaG @37 degrees = -7.39 kcal/mole

3'-CCGTTGTTTCATTCTGGAGTAA-5'

|||||||x|x|||||x

5'-CCTGGGCAACAGAATAAGAT-3'

UT7544-F ACTCCAGTCTGTGTGACAG versus GATA131D09-R AGACTGCAGTGAGATGCCAT

Matches = 9

Score = 8

AGACTGNAGT

est. tm = 9.3 oC

DeltaG @37 degrees = -4.27 kcal/mole

5'-AGACTGCAGTGAGATGCCAT-3'

||||||x|||

3'-GACAGTGTGTCTGACCTCA-5'

UT7544-F ACTCCAGTCTGTGTGACAG versus GATA81B01-R AAGACAGTGTCTAAGCTGTCACA

Matches = 8

Score = 8

TGTGACAG

est. tm = 17.6 oC

DeltaG @37 degrees = -5.64 kcal/mole

3'-ACACTGTCGAATCTGTGACAGAA-5'

||||||||

5'-ACTCCAGTCTGTGTGACAG-3'

GATA68A03-R TTGAAATGGGCACAGAAATT versus GATA29F06Z-F TCTCTGCCCATTCTGAACTTT

Matches = 12

Score = 8

TCTNTGCCCATTNNNA

est. tm = 18.8 oC

DeltaG @37 degrees = -5.14 kcal/mole

5'-TCTCTGCCCATTCTGAACTTT-3'

|||x||||||||xxx|

3'-TTAAAGACACGGGTAAAGTT-5'

MFD466-TTA001-R GCCTGGGCAAAGAGAGAGTA versus GATA29F06Z-F TCTCTGCCCATTCTGAACTTT

Matches = 10

Score = 7

TCTNTGCCCANNC

est. tm = 12.1 oC

DeltaG @37 degrees = -4.55 kcal/mole

5'-TCTCTGCCCATTCTGAACTTT-3'

|||x||||||xx|

3'-ATGAGAGAGAAACGGGTCCG-5'

GATA29F06Z-F TCTCTGCCCATTCTGAACTTT versus SDF1-R GAACAGGCAAAGATGCCCACTCTC

Matches = 10

Score = 7

GAANNGGCANAGA

est. tm = 7.4 oC

DeltaG @37 degrees = -3.60 kcal/mole

5'-GAACAGGCAAAGATGCCCACTCTC-3'

|||xx||||x|||

3'-TTTCAAGTCTTACCCGTCTCT-5'

UT1772-F ATGAGGCTGGCAGACTCG versus UT1772-F ATGAGGCTGGCAGACTCG

Matches = 12

Score = 7

NGAGNCTGNCAGNCTCN

est. tm = 14.0 oC

DeltaG @37 degrees = -4.31 kcal/mole

3'-GCTCAGACGGTCGGAGTA-5'

x|||x|||x|||x|||x

5'-ATGAGGCTGGCAGACTCG-3'

UT1772-F ATGAGGCTGGCAGACTCG versus TATC043-F GCCATCCTCCTGCAAATAAG

Matches = 9

Score = 7

GCCANCCTCNT

est. tm = 5.6 oC

DeltaG @37 degrees = -4.06 kcal/mole

5'-GCCATCCTCCTGCAAATAAG-3'

||||x||||x|

3'-GCTCAGACGGTCGGAGTA-5'

GATA129D11N-F GCACCCCTTTATACTTGGGTG versus GATA129D11N-F GCACCCCTTTATACTTGGGTG

Matches = 14

Score = 8

CACCCNNNTATANNNGGGTG

est. tm = 22.6 oC

DeltaG @37 degrees = -5.23 kcal/mole

3'-GTGGGTTCATATTTCCCCACG-5'

|||||xxx||||xxx|||||

5'-GCACCCCTTTATACTTGGGTG-3'

GATA129D11N-F GCACCCCTTTATACTTGGGTG versus GATA29A05-R TGTTAAACTTTTCACTGAGGTATAA

Matches = 10

Score = 7

TTATACNTNNGTG

est. tm = less than zero

DeltaG @37 degrees = -0.59 kcal/mole

3'-AATATGGAGTCACTTTTCAAATTGT-5'

||||||x|xx|||

5'-GCACCCCTTTATACTTGGGTG-3'

GATA64D02-R GCTTGCAGACAGCCTATTGT versus GATA188F04-F AACAGAACCAATAGGCTATCTATC

Matches = 12

Score = 7

NNNAGANAGCCTATTGN

est. tm = 27.2 oC

DeltaG @37 degrees = -6.79 kcal/mole

3'-CTATCTATCGGATAACCAAGACAA-5'

xxx|||x|||||||||x

5'-GCTTGCAGACAGCCTATTGT-3'

AGAT120-F CTGGGCAACAAAGTGAGACC versus GATA30G01-R AATGAGGTCTTACTTTGTTGCC

Matches = 16

Score = 15

GGCAACAAAGTNAGACC

est. tm = 47.1 oC

DeltaG @37 degrees = -12.98 kcal/mole

3'-CCGTTGTTTCATTCTGGAGTAA-5'

|||||||||||x|||||

5'-CTGGGCAACAAAGTGAGACC-3'

GATA21F03-F TATGTACAGACCTGCAACTTGC versus GATA21F03-F TATGTACAGACCTGCAACTTGC

Matches = 8

Score = 7

GCAANTTGC

est. tm = 10.6 oC

DeltaG @37 degrees = -4.54 kcal/mole

3'-CGTTCAACGTCCAGACATGTAT-5'

||||x||||

5'-TATGTACAGACCTGCAACTTGC-3'

TCTA015-F GAATTGTGTGAGCCGGTTTC versus GATA91H06-R TATTGGACAGTAAAGAAACCTGC

Matches = 8

Score = 7

GCNGGTTTC

est. tm = 6.6 oC

DeltaG @37 degrees = -3.99 kcal/mole

3'-CGTCCAAAGAAATGACAGGTTAT-5'

||x||||||

5'-GAATTGTGTGAGCCGGTTTC-3'

ATA28C05-F TGTCTGCTAATGAATGATTTGG versus GATA8A05-R TTTAACAGACAAATGACAAATCTG

Matches = 9

Score = 7

NTTANCAGACA

est. tm = 7.0 oC

DeltaG @37 degrees = -3.66 kcal/mole

5'-TTTAACAGACAAATGACAAATCTG-3'

x|||x||||||

3'-GGTTTAGTAAGTAATCGTCTGT-5'

GATA31D10-F GTGGGACCTTGTGATTGTGT versus GGAA20G04-R TTCACAAGGTTCCACAAGGT

Matches = 13

Score = 11

NTCACAAGGTNCCAC

est. tm = 39.3 oC

DeltaG @37 degrees = -10.02 kcal/mole

5'-TTCACAAGGTTCCACAAGGT-3'

x|||||||||x||||

3'-TGTGTTAGTGTTCCAGGGTG-5'

GATA31E08-F AGGGGAGAAGGCTAGAATGA versus GATA32C10-F CTATTCATTCAATCATACACCCA

Matches = 13

Score = 7

NGGGNGNANGNTNGAATGA

est. tm = less than zero

DeltaG @37 degrees = -0.86 kcal/mole

3'-ACCCACATACTAACTTACTTATC-5'

x|||x|x|x|x|x||||||

5'-AGGGGAGAAGGCTAGAATGA-3'

TATC043-F GCCATCCTCCTGCAAATAAG versus GGAT1A4-R ATAGTTTTGTGCTTATTGACATGA

Matches = 10

Score = 7

TCNTGNNAATAAG

est. tm = less than zero

DeltaG @37 degrees = -0.70 kcal/mole

3'-AGTACAGTTATTCGTGTTTTGATA-5'

||x||xx||||||

5'-GCCATCCTCCTGCAAATAAG-3'

SDF1-F GGCCTGAATTCATTTATTATTATTCTAATA versus SDF1-F GGCCTGAATTCATTTATTATTATTCTAATA

Matches = 10

Score = 7

TATTANNNTAATA

est. tm = less than zero

DeltaG @37 degrees = greater than zero

3'-ATAATCTTATTATTATTTACTTAAGTCCGG-5'

|||||xxx|||||

5'-GGCCTGAATTCATTTATTATTATTCTAATA-3'

SDF1-F GGCCTGAATTCATTTATTATTATTCTAATA versus SDF1-F GGCCTGAATTCATTTATTATTATTCTAATA

Matches = 12

Score = 8

TATTANNATNNTAATA

est. tm = less than zero

DeltaG @37 degrees = greater than zero

3'-ATAATCTTATTATTATTTACTTAAGTCCGG-5'

|||||xx||xx|||||

5'-GGCCTGAATTCATTTATTATTATTCTAATA-3'

GTTTT001-R AGCCTGGGTGACAGAGTGAA versus GATA32C10-F CTATTCATTCAATCATACACCCA

Matches = 12

Score = 8

TGGGTGNNNGANTGAA

est. tm = 18.2 oC

DeltaG @37 degrees = -4.97 kcal/mole

3'-ACCCACATACTAACTTACTTATC-5'

||||||xxx||x||||

5'-AGCCTGGGTGACAGAGTGAA-3'

GATA30F10-F CCAACTCTCATCTGTATTATCTATG versus GATA6B09-R ACATCTGAGACTTGTAGTAGAAGGC

Matches = 11

Score = 7

ACANNTGAGANTTGN

est. tm = 13.8 oC

DeltaG @37 degrees = -4.31 kcal/mole

5'-ACATCTGAGACTTGTAGTAGAAGGC-3'

|||xx|||||x|||x

3'-GTATCTATTATGTCTACTCTCAACC-5'

ATA25F04-F TCATTAATCTAGCTTTTAAAAACAA versus ATA25F04-F TCATTAATCTAGCTTTTAAAAACAA

Matches = 12

Score = 8

TNGNTTTTAAAANCNA

est. tm = less than zero

DeltaG @37 degrees = greater than zero

3'-AACAAAAATTTTCGATCTAATTACT-5'

|x|x||||||||x|x|

5'-TCATTAATCTAGCTTTTAAAAACAA-3'

GGAA3A07Z-R CAACAAGAGCAAAAATCTGTCTC versus GATA6B02-R GACTGAATATATGTCCTGTTGGC

Matches = 14

Score = 7

GACNGANTNTNNNTCNTGTTG

est. tm = less than 0 oC

DeltaG @37 degrees = -0.14 kcal/mole

5'-GACTGAATATATGTCCTGTTGGC-3'

|||x||x|x|xxx||x|||||

3'-CTCTGTCTAAAAACGAGAACAAC-5'

GGAA3A07Z-R CAACAAGAGCAAAAATCTGTCTC versus GGAT1A4-R ATAGTTTTGTGCTTATTGACATGA

Matches = 13

Score = 8

ANANTTTTGNNCTTNTTG

est. tm = less than 0 oC

DeltaG @37 degrees = -0.22 kcal/mole

5'-ATAGTTTTGTGCTTATTGACATGA-3'

|x|x|||||xx|||x|||

3'-CTCTGTCTAAAAACGAGAACAAC-5'

GATA48E02-R CAGATTTCTGCTTTCCCAGA versus GGAA3A07Z-R CAACAAGAGCAAAAATCTGTCTC

Matches = 13

Score = 7

CNNNNANAGCANAAATCTG

est. tm = 8.8 oC

DeltaG @37 degrees = -2.26 kcal/mole

5'-CAACAAGAGCAAAAATCTGTCTC-3'

|xxxx|x||||x|||||||

3'-AGACCCTTTCGTCTTTAGAC-5'

GATA8A05-R TTTAACAGACAAATGACAAATCTG versus GATA29A05-R TGTTAAACTTTTCACTGAGGTATAA

Matches = 7

Score = 7

TGTTAAA

est. tm = less than 0 oC

DeltaG @37 degrees = -2.52 kcal/mole

5'-TGTTAAACTTTTCACTGAGGTATAA-3'

|||||||

3'-GTCTAAACAGTAAACAGACAATTT-5'

GATA152F05-R TTCTTTGTCTGTGTGCGTGT versus GATA151F03N-R AAGGACTCACATGCACACTGC

Matches = 10

Score = 7

NCNGTGTGCNTGT

est. tm = 15.3 oC

DeltaG @37 degrees = -5.08 kcal/mole

3'-CGTCACACGTACACTCAGGAA-5'

x|x||||||x|||

5'-TTCTTTGTCTGTGTGCGTGT-3'

GATA6A05-R TTGTAATTCTTGGTCCTGCC versus GATA68H04-R CCTGGATCATGAATTGCTAT

Matches = 13

Score = 7

NCNGGANCANGAATTNCNA

est. tm = less than 0 oC

DeltaG @37 degrees = -0.05 kcal/mole

5'-CCTGGATCATGAATTGCTAT-3'

x|x|||x||x|||||x|x|

3'-CCGTCCTGGTTCTTAATGTT-5'

ATA42G12N-R ATGTTGTTCACATGTACCC versus GATA31A10-R ACATGTGTCCATCAAATGATG

Matches = 11

Score = 7

ACATGTGNNCANCAN

est. tm = 15.3 oC

DeltaG @37 degrees = -4.63 kcal/mole

5'-ACATGTGTCCATCAAATGATG-3'

|||||||xx||x||x

3'-CCCATGTACACTTGTTGTA-5'

GATA43A04-R CCTGGATGACAGAGTGCTCT versus GATA129D11N-R TAGTACTCTACCATCCATCTATCCC

Matches = 13

Score = 7

NAGNACTCTNNCATCCANN

est. tm = 25.0 oC

DeltaG @37 degrees = -6.22 kcal/mole

5'-TAGTACTCTACCATCCATCTATCCC-3'

x||x|||||xx||||||xx

3'-TCTCGTGAGACAGTAGGTCC-5'

GGAA22G10N-R CTTAGTGTGACAGGAAGGACG versus GGAA22G10N-R CTTAGTGTGACAGGAAGGACG

Matches = 12

Score = 7

CTTNNTGTNACANNAAG

est. tm = 3.4 oC

DeltaG @37 degrees = -1.71 kcal/mole

5'-CTTAGTGTGACAGGAAGGACG-3'

|||xx|||x|||xx|||

3'-GCAGGAAGGACAGTGTGATTC-5'

GATA137H02N-R TCTGAGGATTCCTCCTTCCT versus GGAA22G10N-R CTTAGTGTGACAGGAAGGACG

Matches = 9

Score = 8

CNTCCTTCCT

est. tm = 11.8 oC

DeltaG @37 degrees = -4.66 kcal/mole

3'-GCAGGAAGGACAGTGTGATTC-5'

|x||||||||

5'-TCTGAGGATTCCTCCTTCCT-3'

ATA4E02-R CTGCTTTGGGTTTCACTTGT versus GATA104-R TGCATAAGTGAAACTTTATGCC

Matches = 13

Score = 7

NGCNTNNNGTTTCACTTNT

est. tm = 12.9 oC

DeltaG @37 degrees = -3.47 kcal/mole

3'-CCGTATTTCAAAGTGAATACGT-5'

x||x|xxx|||||||||x|

5'-CTGCTTTGGGTTTCACTTGT-3'

TTA024-R TGACGAGTTAATGGGTGCAG versus AAT243-R TCACCCATTAATTCTTTGATTTGA

Matches = 13

Score = 8

NCACCCATTAANTCNTNN

est. tm = 24.8 oC

DeltaG @37 degrees = -6.17 kcal/mole

5'-TCACCCATTAATTCTTTGATTTGA-3'

x||||||||||x||x|xx

3'-GACGTGGGTAATTGAGCAGT-5'

GATA45B10N-R AAGCAAATAAAACAATAAACTCG versus AAT243-R TCACCCATTAATTCTTTGATTTGA

Matches = 14

Score = 7

NCAAATNAAANAATNAANNNG

est. tm = less than zero

DeltaG @37 degrees = greater than zero

3'-AGTTTAGTTTCTTAATTACCCACT-5'

x|||||x|||x|||x||xxx|

5'-AAGCAAATAAAACAATAAACTCG-3'

GATA11H10-R CAAAACAGAAACAGAACTAATAAGA versus GATA68F07-R GACAGGAGACAGAATGTTATAAGTT

Matches = 9

Score = 7

AACTNATAANA

est. tm = less than zero

DeltaG @37 degrees = -0.28 kcal/mole

3'-TTGAATATTGTAAGACAGAGGACAG-5'

||||x||||x|

5'-CAAAACAGAAACAGAACTAATAAGA-3'

GATA49D12N-R AGATAGAGGGAAAGGCATATGTG versus GATA176C01-R CTCTATCTCTATCTCTGTCTCTGCC

Matches = 8

Score = 8

CTCTATCT

est. tm = 6.5 oC

DeltaG @37 degrees = -3.71 kcal/mole

5'-CTCTATCTCTATCTCTGTCTCTGCC-3'

||||||||

3'-GTGTATACGGAAAGGGAGATAGA-5'

GATA49D12N-R AGATAGAGGGAAAGGCATATGTG versus GATA176C01-R CTCTATCTCTATCTCTGTCTCTGCC

Matches = 11

Score = 8

CTNTNNCTCTATCT

est. tm = 2.7 oC

DeltaG @37 degrees = -2.11 kcal/mole

5'-CTCTATCTCTATCTCTGTCTCTGCC-3'

||x|xx||||||||

3'-GTGTATACGGAAAGGGAGATAGA-5'

MFD466-TTA001-R GCCTGGGCAAAGAGAGAGTA versus GATA176C01-R CTCTATCTCTATCTCTGTCTCTGCC

Matches = 11

Score = 7

GGCANAGANAGAGNN

est. tm = 20.0 oC

DeltaG @37 degrees = -5.62 kcal/mole

3'-CCGTCTCTGTCTCTATCTCTATCTC-5'

||||x|||x||||xx

5'-GCCTGGGCAAAGAGAGAGTA-3'

GGAA20G04-R TTCACAAGGTTCCACAAGGT versus GATA89G08Z-R AAGCATGTGAAAGGCATTGT

Matches = 9

Score = 7

AANCNTGTGAA

est. tm = less than 0 oC

DeltaG @37 degrees = -1.76 kcal/mole

5'-AAGCATGTGAAAGGCATTGT-3'

||x|x||||||

3'-TGGAACACCTTGGAACACTT-5'

GATA178G09-R TCTTAGTTTATGGGCCACCA versus GATA7G10-R GCCCAAAAAGACAGACAGAA

Matches = 11

Score = 7

GCCCANAAANNNAGA

est. tm = 13.0 oC

DeltaG @37 degrees = -4.16 kcal/mole

5'-GCCCAAAAAGACAGACAGAA-3'

|||||x|||xxx|||

3'-ACCACCGGGTATTTGATTCT-5'

GATA22G12-R GGGTGACAGAGTGAGATGTG versus GATA118G10-R TATAACCTCTCTCCCTATCTCCC

Matches = 14

Score = 8

GGGNGANAGNGNGAGANGTN

est. tm = 8.4 oC

DeltaG @37 degrees = -3.03 kcal/mole

3'-CCCTCTATCCCTCTCTCCAATAT-5'

|||x||x||x|x||||x||x

5'-GGGTGACAGAGTGAGATGTG-3'

GATA131D09-R AGACTGCAGTGAGATGCCAT versus AATA036-R ACTGACTGCAGCCTTGACCT

Matches = 11

Score = 8

NCTNACTGCAGNCT

est. tm = 19.4 oC

DeltaG @37 degrees = -5.58 kcal/mole

5'-ACTGACTGCAGCCTTGACCT-3'

x||x|||||||x||

3'-TACCGTAGAGTGACGTCAGA-5'

GATA63F09-R CTGTCTAGTGTCCTGAGCTGC versus GATA27C08N-R ACACTACACAAGCATAGTCAGGC

Matches = 9

Score = 7

ACACTANACAN

est. tm = 12.2 oC

DeltaG @37 degrees = -4.63 kcal/mole

5'-ACACTACACAAGCATAGTCAGGC-3'

||||||x|||x

3'-CGTCGAGTCCTGTGATCTGTC-5'

GATA21F03-R CCTGCCTGCCTATCTATCTG versus GATA27C08N-R ACACTACACAAGCATAGTCAGGC

Matches = 12

Score = 7

GCCTGNCTATNNNTNTG

est. tm = 5.5 oC

DeltaG @37 degrees = -2.30 kcal/mole

3'-CGGACTGATACGAACACATCACA-5'

|||||x||||xxx|x||

5'-CCTGCCTGCCTATCTATCTG-3'

ATA10H11-R CATTCTGGTTGGGGAACATA versus GATA30F10-R TCTTATCTCCACCCACCAGA

Matches = 13

Score = 9

TCTGGTNGGNGNANATA

est. tm = 2.4 oC

DeltaG @37 degrees = -2.20 kcal/mole

3'-AGACCACCCACCTCTATTCT-5'

||||||x||x|x|x|||

5'-CATTCTGGTTGGGGAACATA-3'

AATA058-R GGGAGGACATTGCAGAAAAC versus GGAA22G01-R TCGTTGAGATTTTGTGCTATG

Matches = 10

Score = 7

CATNGCANAAAAN

est. tm = 8.6 oC

DeltaG @37 degrees = -3.64 kcal/mole

3'-GTATCGTGTTTTAGAGTTGCT-5'

|||x|||x||||x

5'-GGGAGGACATTGCAGAAAAC-3'

GATA63F09-R CTGTCTAGTGTCCTGAGCTGC versus GATA68F07-R GACAGGAGACAGAATGTTATAAGTT

Matches = 10

Score = 8

GACANNAGACAG

est. tm = 17.1 oC

DeltaG @37 degrees = -4.91 kcal/mole

5'-GACAGGAGACAGAATGTTATAAGTT-3'

||||xx||||||

3'-CGTCGAGTCCTGTGATCTGTC-5'

GATA22F11NZ-R TCTCTCTTGCTCCACTGCAA versus GATA70E01-R TAGAGCAAAACAGAAATGAGG

Matches = 11

Score = 8

TNGAGCAANANAGA

est. tm = 2.1 oC

DeltaG @37 degrees = -2.71 kcal/mole

5'-TAGAGCAAAACAGAAATGAGG-3'

|x||||||x|x|||

3'-AACGTCACCTCGTTCTCTCT-5'

GATA22F11NZ-R TCTCTCTTGCTCCACTGCAA versus ATT077-R AGGATACGGAGGTTGCAGTG

Matches = 8

Score = 8

CACTGCAA

est. tm = 20.3 oC

DeltaG @37 degrees = -6.12 kcal/mole

3'-GTGACGTTGGAGGCATAGGA-5'

||||||||

5'-TCTCTCTTGCTCCACTGCAA-3'

GATA22F11NZ-R TCTCTCTTGCTCCACTGCAA versus GATA144D04-R ATCTTTCTGTACTTGCAGTGAGG

Matches = 9

Score = 7

CNNCACTGCAA

est. tm = 12.2 oC

DeltaG @37 degrees = -4.47 kcal/mole

3'-GGAGTGACGTTCATGTCTTTCTA-5'

|xx||||||||

5'-TCTCTCTTGCTCCACTGCAA-3'

GATA6G12-R GAAGACCTACGGATTGGGTC versus GATA84C01-R TGGAGTGGACCAATTCCTTA

Matches = 10

Score = 7

TANGGANTNGGTC

est. tm = less than zero

DeltaG @37 degrees = -1.48 kcal/mole

3'-ATTCCTTAACCAGGTGAGGT-5'

||x|||x|x||||

5'-GAAGACCTACGGATTGGGTC-3'

MFD466-TTA001-R GCCTGGGCAAAGAGAGAGTA versus MFD427-AAAT028-R GGTTTCCTAACTCTTTTCCCTGA

Matches = 13

Score = 7

NCNGGGNAAAGAGNNAGNA

est. tm = 2.8 oC

DeltaG @37 degrees = -2.09 kcal/mole

3'-AGTCCCTTTTCTCAATCCTTTGG-5'

x|x|||x||||||xx||x|

5'-GCCTGGGCAAAGAGAGAGTA-3'

GATA31D10-R CTGGCTGACACTTAGGGAAA versus MFD427-AAAT028-R GGTTTCCTAACTCTTTTCCCTGA

Matches = 8

Score = 7

TNAGGGAAA

est. tm = less than zero

DeltaG @37 degrees = -3.30 kcal/mole

3'-AGTCCCTTTTCTCAATCCTTTGG-5'

|x|||||||

5'-CTGGCTGACACTTAGGGAAA-3'

AAT013-R ATTTGCTTTCAACCCCACTG versus GATA22G05-R AAAACAAATATGGCTCTATCTATCG

Matches = 8

Score = 7

AAANCAAAT

est. tm = less than 0 oC

DeltaG @37 degrees = -1.40 kcal/mole

5'-AAAACAAATATGGCTCTATCTATCG-3'

|||x|||||

3'-GTCACCCCAACTTTCGTTTA-5'

GATA21D04-R TGCTTGGCACACTTCAGG versus GGAA19H07-R GCCAAGCACTCTTTTCTTCA

Matches = 8

Score = 8

GCCAAGCA

est. tm = 26.1 oC

DeltaG @37 degrees = -7.27 kcal/mole

5'-GCCAAGCACTCTTTTCTTCA-3'

||||||||

3'-GGACTTCACACGGTTCGT-5'

ATTT030-R GCCTGGCAGACAAGAGTGA versus GGAA19H07-R GCCAAGCACTCTTTTCTTCA

Matches = 11

Score = 7

NGNAGANAAGAGTGN

est. tm = 17.0 oC

DeltaG @37 degrees = -5.00 kcal/mole

3'-ACTTCTTTTCTCACGAACCG-5'

x|x|||x|||||||x

5'-GCCTGGCAGACAAGAGTGA-3'

GATA121A08N-R TGAGTATGCCACACTGCA versus ATT077-R AGGATACGGAGGTTGCAGTG

Matches = 7

Score = 7

CACTGCA

est. tm = 13.7 oC

DeltaG @37 degrees = -5.38 kcal/mole

3'-GTGACGTTGGAGGCATAGGA-5'

|||||||

5'-TGAGTATGCCACACTGCA-3'

ATT077-R AGGATACGGAGGTTGCAGTG versus GATG011-R CCACCACGGTATCATCCAAT

Matches = 11

Score = 7

CNACCNCNGTATCNT

est. tm = less than 0 oC

DeltaG @37 degrees = > 0 kcal/mole

5'-CCACCACGGTATCATCCAAT-3'

|x|||x|x|||||x|

3'-GTGACGTTGGAGGCATAGGA-5'

ATA20G07Z-R TGTGAGCCAGACATTAAACA versus GATA31D10-R CTGGCTGACACTTAGGGAAA

Matches = 9

Score = 8

CTGGCTNACA

est. tm = 18.4 oC

DeltaG @37 degrees = -5.80 kcal/mole

5'-CTGGCTGACACTTAGGGAAA-3'

||||||x|||

3'-ACAAATTACAGACCGAGTGT-5'

GATA84E11-R CACACATGCTGTGTCTCTCA versus GATA47F05-R AACAGCAAAAAGACACACAGC

Matches = 10

Score = 7

GCTGTGTNTCTNN

est. tm = 24.3 oC

DeltaG @37 degrees = -6.52 kcal/mole

3'-CGACACACAGAAAAACGACAA-5'

|||||||x|||xx

5'-CACACATGCTGTGTCTCTCA-3'

GATA89G08Z-R AAGCATGTGAAAGGCATTGT versus GATA63D12-R AATATTGACTTTCTCTTGCTACCC

Matches = 14

Score = 8

ANANTGNCTTTCNCNTGCTN

est. tm = 5.8 oC

DeltaG @37 degrees = -2.41 kcal/mole

5'-AATATTGACTTTCTCTTGCTACCC-3'

|x|x||x|||||x|x||||x

3'-TGTTACGGAAAGTGTACGAA-5'

GATA2H09-R TCTACTTGGCATCCCTGATG versus GATA6D09-R TTATGAAGCAGTGATGCCAA

Matches = 12

Score = 9

TTGGCATCNCTGNTN

est. tm = 26.5 oC

DeltaG @37 degrees = -6.88 kcal/mole

3'-AACCGTAGTGACGAAGTATT-5'

||||||||x|||x|x

5'-TCTACTTGGCATCCCTGATG-3'

AAT013-R ATTTGCTTTCAACCCCACTG versus GATA43C11-R TGGGTCTAGTCCAGTGGTGT

Matches = 8

Score = 7

ACNCCACTG

est. tm = 5.1 oC

DeltaG @37 degrees = -4.01 kcal/mole

3'-TGTGGTGACCTGATCTGGGT-5'

||x||||||

5'-ATTTGCTTTCAACCCCACTG-3'

AAT013-R ATTTGCTTTCAACCCCACTG versus GATA45B10N-R AAGCAAATAAAACAATAAACTCG

Matches = 8

Score = 8

AAGCAAAT

est. tm = 11.1 oC

DeltaG @37 degrees = -4.59 kcal/mole

5'-AAGCAAATAAAACAATAAACTCG-3'

||||||||

3'-GTCACCCCAACTTTCGTTTA-5'

ATA12D05-R CACCTCAGCCTCTTTGGTAG versus ATA82B02N-R AGAGGCTGAGGTGAAGGATT

Matches = 13

Score = 13

AGAGGCTGAGGTG

est. tm = 47.0 oC

DeltaG @37 degrees = -12.38 kcal/mole

5'-AGAGGCTGAGGTGAAGGATT-3'

|||||||||||||

3'-GATGGTTTCTCCGACTCCAC-5'

GATA165G02N-R CTGTCACAGGACTTTTCAGCC versus GATA165G02N-R CTGTCACAGGACTTTTCAGCC

Matches = 8

Score = 7

CTGTNACAG

est. tm = 3.9 oC

DeltaG @37 degrees = -3.53 kcal/mole

5'-CTGTCACAGGACTTTTCAGCC-3'

||||x||||

3'-CCGACTTTTCAGGACACTGTC-5'

GATA81B01-R AAGACAGTGTCTAAGCTGTCACA versus GATA81B01-R AAGACAGTGTCTAAGCTGTCACA

Matches = 10

Score = 7

NAGACANTGTCTN

est. tm = 24.2 oC

DeltaG @37 degrees = -6.57 kcal/mole

5'-AAGACAGTGTCTAAGCTGTCACA-3'

x|||||x|||||x

3'-ACACTGTCGAATCTGTGACAGAA-5'

GATA137H02N-R TCTGAGGATTCCTCCTTCCT versus AAT107-R CATTCTGAGAGGAAGGCAGAA

Matches = 10

Score = 8

TTCNNCCTTCCT

est. tm = 13.8 oC

DeltaG @37 degrees = -4.66 kcal/mole

3'-AAGACGGAAGGAGAGTCTTAC-5'

|||xx|||||||

5'-TCTGAGGATTCCTCCTTCCT-3'

GGAA3F06-R CCAAATAAGACTCAGGACGC versus GATA63A03N-R TATTTGGCAAGAATAGATACAGG

Matches = 7

Score = 7

TATTTGG

est. tm = less than 0 oC

DeltaG @37 degrees = -2.82 kcal/mole

5'-TATTTGGCAAGAATAGATACAGG-3'

|||||||

3'-CGCAGGACTCAGAATAAACC-5'

GATA31A10-R ACATGTGTCCATCAAATGATG versus GATA31A10-R ACATGTGTCCATCAAATGATG

Matches = 10

Score = 8

CATCANNTGATG

est. tm = 13.3 oC

DeltaG @37 degrees = -4.10 kcal/mole

3'-GTAGTAAACTACCTGTGTACA-5'

|||||xx|||||

5'-ACATGTGTCCATCAAATGATG-3'

GATA3F01-R CTGAGGTATCAAAAACTCAGAGG versus GATA3F01-R CTGAGGTATCAAAAACTCAGAGG

Matches = 14

Score = 8

CTGAGNTNTNNANANCTCAG

est. tm = less than 0 oC

DeltaG @37 degrees = -0.73 kcal/mole

5'-CTGAGGTATCAAAAACTCAGAGG-3'

|||||x|x|xx|x|x|||||

3'-GGAGACTCAAAAACTATGGAGTC-5'

GATA43C11-R TGGGTCTAGTCCAGTGGTGT versus GATA84C01-R TGGAGTGGACCAATTCCTTA

Matches = 10

Score = 7

TGGANTNGACCNA

est. tm = less than 0 oC

DeltaG @37 degrees = -2.28 kcal/mole

5'-TGGAGTGGACCAATTCCTTA-3'

||||x|x||||x|

3'-TGTGGTGACCTGATCTGGGT-5'

GATA43C11-R TGGGTCTAGTCCAGTGGTGT versus ATA25F04-R AGACCCAGTTGATGCAATGT

Matches = 7

Score = 7

AGACCCA

est. tm = 10.0 oC

DeltaG @37 degrees = -5.14 kcal/mole

5'-AGACCCAGTTGATGCAATGT-3'

|||||||

3'-TGTGGTGACCTGATCTGGGT-5'

GATA30D09N-R AGCCTCTGTGCAGATCCTC versus ATA82B02N-R AGAGGCTGAGGTGAAGGATT

Matches = 7

Score = 7

AGAGGCT

est. tm = 10.7 oC

DeltaG @37 degrees = -5.21 kcal/mole

5'-AGAGGCTGAGGTGAAGGATT-3'

|||||||

3'-CTCCTAGACGTGTCTCCGA-5'

TTA024-R TGACGAGTTAATGGGTGCAG versus AATA036-R ACTGACTGCAGCCTTGACCT

Matches = 11

Score = 7

AGNTNANGGNTGCAG

est. tm = less than zero

DeltaG @37 degrees = -1.74 kcal/mole

3'-TCCAGTTCCGACGTCAGTCA-5'

||x|x|x||x|||||

5'-TGACGAGTTAATGGGTGCAG-3'

GATA91H06-R TATTGGACAGTAAAGAAACCTGC versus GGAA20C10-R TTCCTGTCCTCTAATGTAACTTACC

Matches = 10

Score = 7

TTNCTGTCCNNTA

est. tm = less than 0 oC

DeltaG @37 degrees = -2.04 kcal/mole

5'-TTCCTGTCCTCTAATGTAACTTACC-3'

||x||||||xx||

3'-CGTCCAAAGAAATGACAGGTTAT-5'

GATA14E09-R GTCATAATATCTGCCAATGATTG versus GATA14E09-R GTCATAATATCTGCCAATGATTG

Matches = 8

Score = 7

CAATNATTG

est. tm = less than zero

DeltaG @37 degrees = -1.83 kcal/mole

3'-GTTAGTAACCGTCTATAATACTG-5'

||||x||||

5'-GTCATAATATCTGCCAATGATTG-3'

GAAT1A4N-R CCCAAGGGCAGAAATTATTA versus GATA14E09-R GTCATAATATCTGCCAATGATTG

Matches = 14

Score = 8

TNATAATNTCTGCCNNTGNN

est. tm = 17.5 oC

DeltaG @37 degrees = -4.28 kcal/mole

5'-GTCATAATATCTGCCAATGATTG-3'

|x|||||x||||||xx||xx

3'-ATTATTAAAGACGGGAACCC-5'

GAAT1A4N-R CCCAAGGGCAGAAATTATTA versus ACT1A01-R CCACTAACTAGTTTGTGACTTTGG

Matches = 13

Score = 7

CCAANGNCANAAANTANTN

est. tm = less than zero

DeltaG @37 degrees = -0.07 kcal/mole

3'-GGTTTCAGTGTTTGATCAATCACC-5'

||||x|x||x|||x||x|x

5'-CCCAAGGGCAGAAATTATTA-3'

GGAA21G11-R CCAGTTTAGGCAACAGAACA versus GATA6B02-R GACTGAATATATGTCCTGTTGGC

Matches = 10

Score = 8

GNCAACAGNACA

est. tm = 6.6 oC

DeltaG @37 degrees = -3.41 kcal/mole

3'-CGGTTGTCCTGTATATAAGTCAG-5'

|x||||||x|||

5'-CCAGTTTAGGCAACAGAACA-3'

GATA187D09N-R CCACAAATACATTTCCCTGA versus GACAG001-R GGGGGAAGTATTTGCAGTCA

Matches = 12

Score = 7

GGGNNANGTATTTGNNG

est. tm = 0.9 oC

DeltaG @37 degrees = -1.34 kcal/mole

5'-GGGGGAAGTATTTGCAGTCA-3'

|||xx|x|||||||xx|

3'-AGTCCCTTTACATAAACACC-5'

GATA187D09N-R CCACAAATACATTTCCCTGA versus GATA49D12N-R AGATAGAGGGAAAGGCATATGTG

Matches = 14

Score = 9

CACANATNCNTTTCCCTNN

est. tm = 22.9 oC

DeltaG @37 degrees = -5.62 kcal/mole

3'-GTGTATACGGAAAGGGAGATAGA-5'

||||x||x|x|||||||xx

5'-CCACAAATACATTTCCCTGA-3'

GATA187D09N-R CCACAAATACATTTCCCTGA versus GATA31D10-R CTGGCTGACACTTAGGGAAA

Matches = 8

Score = 7

TTTCCCTNA

est. tm = less than zero

DeltaG @37 degrees = -3.30 kcal/mole

3'-AAAGGGATTCACAGTCGGTC-5'

|||||||x|

5'-CCACAAATACATTTCCCTGA-3'

GATA87E02N-R TTGATTGACTGCACTTTTCA versus GATA46A12-R AAAGAGTAAACTCAATGAAAGATGC

Matches = 13

Score = 7

NAANAGTNNANTCAATNAA

est. tm = less than 0 oC

DeltaG @37 degrees = -0.66 kcal/mole

5'-AAAGAGTAAACTCAATGAAAGATGC-3'

x||x|||xx|x|||||x||

3'-ACTTTTCACGTCAGTTAGTT-5'

GATA87E02N-R TTGATTGACTGCACTTTTCA versus GATA188F04-R TACAGTAAATCACTTGGTAGGAGA

Matches = 10

Score = 7

TNCAGTNAATCAN

est. tm = 5.7 oC

DeltaG @37 degrees = -3.37 kcal/mole

5'-TACAGTAAATCACTTGGTAGGAGA-3'

|x||||x|||||x

3'-ACTTTTCACGTCAGTTAGTT-5'

GATA121A08N-R TGAGTATGCCACACTGCA versus AGAT125-R TGGCAAAGTCAGGCCATTAT

Matches = 9

Score = 7

TGGCANANTCA

est. tm = 3.6 oC

DeltaG @37 degrees = -3.80 kcal/mole

5'-TGGCAAAGTCAGGCCATTAT-3'

|||||x|x|||

3'-ACGTCACACCGTATGAGT-5'

ATA21A03-R TGCATCCACCTTTGCTATAA versus GGAA2A03-R TAGGTTTTTAAGGAACAGGTGG

Matches = 11

Score = 7

CCACCTNTNCNNTAA

est. tm = less than zero

DeltaG @37 degrees = -1.65 kcal/mole

3'-GGTGGACAAGGAATTTTTGGAT-5'

||||||x|x|xx|||

5'-TGCATCCACCTTTGCTATAA-3'

GATA121A08N-R TGAGTATGCCACACTGCA versus GATA144D04-R ATCTTTCTGTACTTGCAGTGAGG

Matches = 9

Score = 8

CCNCACTGCA

est. tm = 19.5 oC

DeltaG @37 degrees = -5.97 kcal/mole

3'-GGAGTGACGTTCATGTCTTTCTA-5'

||x|||||||

5'-TGAGTATGCCACACTGCA-3'

ATGT006Z-R CTGCACAGCAGAGTGAGACC versus GATA30G01-R AATGAGGTCTTACTTTGTTGCC

Matches = 12

Score = 7

NNCANCANAGTNAGACC

est. tm = 12.0 oC

DeltaG @37 degrees = -3.79 kcal/mole

3'-CCGTTGTTTCATTCTGGAGTAA-5'

xx||x||x|||x|||||

5'-CTGCACAGCAGAGTGAGACC-3'

GATA6B09-R ACATCTGAGACTTGTAGTAGAAGGC versus GATA6B09-R ACATCTGAGACTTGTAGTAGAAGGC

Matches = 12

Score = 7

GNCTTNTANTANAAGNC

est. tm = less than zero

DeltaG @37 degrees = greater than zero

3'-CGGAAGATGATGTTCAGAGTCTACA-5'

|x|||x||x||x|||x|

5'-ACATCTGAGACTTGTAGTAGAAGGC-3'

GGAA29H03N-R AGTTGACTCTTTCCCCAACTA versus GATA46A12-R AAAGAGTAAACTCAATGAAAGATGC

Matches = 11

Score = 10

AAAGAGTNAACT

est. tm = 19.2 oC

DeltaG @37 degrees = -5.29 kcal/mole

5'-AAAGAGTAAACTCAATGAAAGATGC-3'

|||||||x||||

3'-ATCAACCCCTTTCTCAGTTGA-5'

GGAA7G08NZ-R CTGGGCAATGGAGTGAGACT versus GATA30G01-R AATGAGGTCTTACTTTGTTGCC

Matches = 12

Score = 7

GGCAANNNAGTNAGACN

est. tm = 23.2 oC

DeltaG @37 degrees = -5.98 kcal/mole

3'-CCGTTGTTTCATTCTGGAGTAA-5'

|||||xxx|||x||||x

5'-CTGGGCAATGGAGTGAGACT-3'

GTAT1A05-R TTGGTGACAAAGAAAGTCTCC versus GATA30G01-R AATGAGGTCTTACTTTGTTGCC

Matches = 13

Score = 7

GGNNACAAAGNAAGNCNNC

est. tm = less than zero

DeltaG @37 degrees = -0.68 kcal/mole

3'-CCGTTGTTTCATTCTGGAGTAA-5'

||xx||||||x|||x|xx|

5'-TTGGTGACAAAGAAAGTCTCC-3'

GATA21F03-R CCTGCCTGCCTATCTATCTG versus GATA49D12N-R AGATAGAGGGAAAGGCATATGTG

Matches = 13

Score = 7

AGATAGANNGNNAGGCANN

est. tm = 20.6 oC

DeltaG @37 degrees = -5.10 kcal/mole

5'-AGATAGAGGGAAAGGCATATGTG-3'

|||||||xx|xx|||||xx

3'-GTCTATCTATCCGTCCGTCC-5'

ATA55A11N-R CAGAAAATGGAGGGTAGCAA versus GATA63D12-R AATATTGACTTTCTCTTGCTACCC

Matches = 9

Score = 9

GGGTAGCAA

est. tm = 26.6 oC

DeltaG @37 degrees = -7.17 kcal/mole

3'-CCCATCGTTCTCTTTCAGTTATAA-5'

|||||||||

5'-CAGAAAATGGAGGGTAGCAA-3'

GATA49C09N-R GGAAACAGTTAAATGGCCAA versus GGAA29H03N-R AGTTGACTCTTTCCCCAACTA

Matches = 11

Score = 8

ANTTNACTNTTTCC

est. tm = less than 0 oC

DeltaG @37 degrees = -1.79 kcal/mole

5'-AGTTGACTCTTTCCCCAACTA-3'

|x||x|||x|||||

3'-AACCGGTAAATTGACAAAGG-5'

GATA11C08-R GGCTGCAGTTAGCTGTCATT versus AATA036-R ACTGACTGCAGCCTTGACCT

Matches = 11

Score = 9

NCTNACTGCAGCC

est. tm = 35.9 oC

DeltaG @37 degrees = -9.10 kcal/mole

5'-ACTGACTGCAGCCTTGACCT-3'

x||x|||||||||

3'-TTACTGTCGATTGACGTCGG-5'

AAAT007-R AGGCTCATCCACAGAGATGG versus GATA74E02Z-R TGAGCCTTTAGACTTGGACCA

Matches = 7

Score = 7

TGAGCCT

est. tm = 12.0 oC

DeltaG @37 degrees = -5.38 kcal/mole

5'-TGAGCCTTTAGACTTGGACCA-3'

|||||||

3'-GGTAGAGACACCTACTCGGA-5'

GATA43H01-R ACGTGGTACAGGTAGATAAATGG versus AGAT120-R TTGTCTGTCATCTATCTACCCATC

Matches = 12

Score = 7

NANNGGTAGATANATGN

est. tm = 13.9 oC

DeltaG @37 degrees = -3.89 kcal/mole

3'-CTACCCATCTATCTACTGTCTGTT-5'

x|xx||||||||x|||x

5'-ACGTGGTACAGGTAGATAAATGG-3'

GGAT3F08-R TATCCATCCATCCATCAACC versus GATA43H01-R ACGTGGTACAGGTAGATAAATGG

Matches = 10

Score = 7

CCATNNATCNACC

est. tm = 3.6 oC

DeltaG @37 degrees = -2.83 kcal/mole

3'-GGTAAATAGATGGACATGGTGCA-5'

||||xx|||x|||

5'-TATCCATCCATCCATCAACC-3'

GATA71H05-R GACATTGTCAGTGTCAGCCA versus ATA41E04-R GTGACTAAACCTGACATTGTGC

Matches = 14

Score = 8

TGNCTNANNCTGACANTGTN

est. tm = 14.9 oC

DeltaG @37 degrees = -3.98 kcal/mole

5'-GTGACTAAACCTGACATTGTGC-3'

||x||x|xx||||||x|||x

3'-ACCGACTGTGACTGTTACAG-5'

TTAT023z-R CCTGTAATCCCAGCTGCTCT versus AAT034-R CTGGGATTACAGGCGTGAGT

Matches = 13

Score = 13

CTGGGATTACAGG

est. tm = 41.2 oC

DeltaG @37 degrees = -10.63 kcal/mole

5'-CTGGGATTACAGGCGTGAGT-3'

|||||||||||||

3'-TCTCGTCGACCCTAATGTCC-5'

GATA71H05-R GACATTGTCAGTGTCAGCCA versus GATA71H05-R GACATTGTCAGTGTCAGCCA

Matches = 8

Score = 7

GACANTGTC

est. tm = 4.6 oC

DeltaG @37 degrees = -3.58 kcal/mole

5'-GACATTGTCAGTGTCAGCCA-3'

||||x||||

3'-ACCGACTGTGACTGTTACAG-5'

GATA71H05-R GACATTGTCAGTGTCAGCCA versus GATA71H05-R GACATTGTCAGTGTCAGCCA

Matches = 12

Score = 9

GACANTGNCANTGTC

est. tm = 13.7 oC

DeltaG @37 degrees = -4.02 kcal/mole

5'-GACATTGTCAGTGTCAGCCA-3'

||||x||x||x||||

3'-ACCGACTGTGACTGTTACAG-5'

GATA185H04N-R ATATTTCAATATTGTAACCAGTCC versus GATA185H04N-R ATATTTCAATATTGTAACCAGTCC

Matches = 10

Score = 8

ATATTNNAATAT

est. tm = less than 0 oC

DeltaG @37 degrees = -0.48 kcal/mole

5'-ATATTTCAATATTGTAACCAGTCC-3'

|||||xx|||||

3'-CCTGACCAATGTTATAACTTTATA-5'

ACT1A01-R CCACTAACTAGTTTGTGACTTTGG versus ACT1A01-R CCACTAACTAGTTTGTGACTTTGG

Matches = 14

Score = 10

NCACNAACTAGTTNGTGN

est. tm = 31.1 oC

DeltaG @37 degrees = -7.66 kcal/mole

5'-CCACTAACTAGTTTGTGACTTTGG-3'

x|||x||||||||x|||x

3'-GGTTTCAGTGTTTGATCAATCACC-5'

ATA82B02N-R AGAGGCTGAGGTGAAGGATT versus ATA28C05-R CCATCCCCTAAACCTCTCAT

Matches = 13

Score = 9

CCNTCNCCTNANCCTCT

est. tm = 9.7 oC

DeltaG @37 degrees = -3.59 kcal/mole

5'-CCATCCCCTAAACCTCTCAT-3'

||x||x|||x|x|||||

3'-TTAGGAAGTGGAGTCGGAGA-5'

AAT034-R CTGGGATTACAGGCGTGAGT versus AGAT144-R ATCCCAGATGGAAACATGGA

Matches = 7

Score = 7

ATCCCAG

est. tm = 7.6 oC

DeltaG @37 degrees = -4.62 kcal/mole

5'-ATCCCAGATGGAAACATGGA-3'

|||||||

3'-TGAGTGCGGACATTAGGGTC-5'

GATA165B12-R TTAAAATCATTTTCACTGTGTATGC versus GATA165B12-R TTAAAATCATTTTCACTGTGTATGC

Matches = 12

Score = 9

TNAAAATNATTTTNA

est. tm = less than 0 oC

DeltaG @37 degrees = -0.36 kcal/mole

5'-TTAAAATCATTTTCACTGTGTATGC-3'

|x|||||x|||||x|

3'-CGTATGTGTCACTTTTACTAAAATT-5'

GATA31E08-R CAGCTGACAGAGCACAGAGA versus GATA32C10-R GATTCTTTGTGGTGGGTCTG

Matches = 12

Score = 7

CNGACNNANCACANAGA

est. tm = less than zero

DeltaG @37 degrees = -0.96 kcal/mole

3'-GTCTGGGTGGTGTTTCTTAG-5'

|x|||xx|x||||x|||

5'-CAGCTGACAGAGCACAGAGA-3'